RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
SNRNP200-204ENST00000480615 COL18A1P39060 1754 aa18.33■□□□□ 0.52
SNRNP200-204ENST00000480615 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
SNRNP200-204ENST00000480615 AATKQ6ZMQ8 1374 aa18.32■□□□□ 0.52
SNRNP200-204ENST00000480615 NRAPQ86VF7 1730 aa18.31■□□□□ 0.52
SNRNP200-204ENST00000480615 EVA1CP58658 441 aa18.31■□□□□ 0.52
SNRNP200-204ENST00000480615 UNC5CLQ8IV45 518 aa18.31■□□□□ 0.52
SNRNP200-204ENST00000480615 PEAK1Q9H792 1746 aa18.31■□□□□ 0.52
SNRNP200-204ENST00000480615 ZNF772Q68DY9 489 aaPredicted RBP18.31■□□□□ 0.52
SNRNP200-204ENST00000480615 LTV1Q96GA3 475 aaPredicted RBP18.31■□□□□ 0.52
SNRNP200-204ENST00000480615 QTRT2Q9H974 415 aaKnown RBP18.3■□□□□ 0.52
SNRNP200-204ENST00000480615 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
SNRNP200-204ENST00000480615 POLKQ9UBT6 870 aa18.29■□□□□ 0.52
SNRNP200-204ENST00000480615 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.29■□□□□ 0.52
SNRNP200-204ENST00000480615 COL5A2P05997 1499 aaPredicted RBP18.29■□□□□ 0.52
SNRNP200-204ENST00000480615 HOXC9P31274 260 aa18.28■□□□□ 0.52
SNRNP200-204ENST00000480615 POTEAQ6S8J7 498 aa18.28■□□□□ 0.52
SNRNP200-204ENST00000480615 USP35Q9P2H5 1018 aa18.28■□□□□ 0.52
SNRNP200-204ENST00000480615 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.52
SNRNP200-204ENST00000480615 LARP1Q6PKG0 1096 aaKnown RBP18.27■□□□□ 0.52
SNRNP200-204ENST00000480615 IP6K1Q92551 441 aa18.27■□□□□ 0.52
SNRNP200-204ENST00000480615 HSP90AB2PQ58FF8 381 aa18.27■□□□□ 0.51
SNRNP200-204ENST00000480615 TRPC5Q9UL62 973 aaPredicted RBP18.26■□□□□ 0.51
SNRNP200-204ENST00000480615 FLT4P35916 1363 aa18.25■□□□□ 0.51
SNRNP200-204ENST00000480615 ANKRD24Q8TF21 1146 aa18.25■□□□□ 0.51
SNRNP200-204ENST00000480615 RTL1A6NKG5 1358 aa18.25■□□□□ 0.51
SNRNP200-204ENST00000480615 ABCC6O95255 1503 aa18.24■□□□□ 0.51
SNRNP200-204ENST00000480615 TOM1L2Q6ZVM7 507 aa18.24■□□□□ 0.51
SNRNP200-204ENST00000480615 ATRNO75882 1429 aa18.24■□□□□ 0.51
SNRNP200-204ENST00000480615 MTHFSP49914 203 aa18.23■□□□□ 0.51
SNRNP200-204ENST00000480615 VPS72Q15906 364 aa18.23■□□□□ 0.51
SNRNP200-204ENST00000480615 BLMP54132 1417 aaPredicted RBP18.23■□□□□ 0.51
SNRNP200-204ENST00000480615 RGPD2P0DJD1 1756 aa18.23■□□□□ 0.51
SNRNP200-204ENST00000480615 ERBB3P21860 1342 aa18.23■□□□□ 0.51
SNRNP200-204ENST00000480615 GJD4Q96KN9 370 aaPredicted RBP18.22■□□□□ 0.51
SNRNP200-204ENST00000480615 NLRP2Q9NX02 1062 aa18.22■□□□□ 0.51
SNRNP200-204ENST00000480615 WDR17Q8IZU2 1322 aa18.22■□□□□ 0.51
SNRNP200-204ENST00000480615 RXRBP28702 533 aa18.21■□□□□ 0.51
SNRNP200-204ENST00000480615 PPP2R1AP30153 589 aa18.21■□□□□ 0.51
SNRNP200-204ENST00000480615 PARD3Q8TEW0 1356 aa18.21■□□□□ 0.51
SNRNP200-204ENST00000480615 GLI3P10071 1580 aa18.2■□□□□ 0.5
SNRNP200-204ENST00000480615 CRB1P82279 1406 aa18.2■□□□□ 0.5
SNRNP200-204ENST00000480615 INSRP06213 1382 aa18.2■□□□□ 0.5
SNRNP200-204ENST00000480615 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
SNRNP200-204ENST00000480615 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
SNRNP200-204ENST00000480615 A0A0G2JS52 829 aa18.2■□□□□ 0.5
SNRNP200-204ENST00000480615 MYT1Q01538 1121 aa18.2■□□□□ 0.5
SNRNP200-204ENST00000480615 SMG6Q86US8 1419 aaKnown RBP18.2■□□□□ 0.5
SNRNP200-204ENST00000480615 KIF24Q5T7B8 1368 aa18.2■□□□□ 0.5
SNRNP200-204ENST00000480615 CDK12Q9NYV4 1490 aaPredicted RBP18.19■□□□□ 0.5
SNRNP200-204ENST00000480615 SPATA31A1Q5TZJ5 1347 aa18.19■□□□□ 0.5
SNRNP200-204ENST00000480615 RBM6P78332 1123 aaKnown RBP18.19■□□□□ 0.5
SNRNP200-204ENST00000480615 FAM98CQ17RN3 349 aaKnown RBP18.19■□□□□ 0.5
SNRNP200-204ENST00000480615 USHBP1Q8N6Y0 703 aa18.19■□□□□ 0.5
SNRNP200-204ENST00000480615 EIF4A2Q14240 407 aaKnown RBP18.17■□□□□ 0.5
SNRNP200-204ENST00000480615 RALBP1Q15311 655 aa18.17■□□□□ 0.5
SNRNP200-204ENST00000480615 PRKRIP1Q9H875 184 aaPredicted RBP18.17■□□□□ 0.5
SNRNP200-204ENST00000480615 FAM208AQ9UK61 1670 aaKnown RBP18.17■□□□□ 0.5
SNRNP200-204ENST00000480615 NBPF6Q5VWK0 638 aa18.16■□□□□ 0.5
SNRNP200-204ENST00000480615 DIEXFQ68CQ4 756 aaKnown RBP18.16■□□□□ 0.5
SNRNP200-204ENST00000480615 TCP11L2Q8N4U5 519 aa18.16■□□□□ 0.5
SNRNP200-204ENST00000480615 NBPF4Q96M43 638 aa18.16■□□□□ 0.5
SNRNP200-204ENST00000480615 CARD10Q9BWT7 1032 aa18.15■□□□□ 0.5
SNRNP200-204ENST00000480615 ANP32CO43423 234 aa18.14■□□□□ 0.49
SNRNP200-204ENST00000480615 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
SNRNP200-204ENST00000480615 CFAP53Q96M91 514 aa18.12■□□□□ 0.49
SNRNP200-204ENST00000480615 RGS12O14924 1447 aa18.12■□□□□ 0.49
SNRNP200-204ENST00000480615 DIAPH1O60610 1272 aaKnown RBP18.12■□□□□ 0.49
SNRNP200-204ENST00000480615 EYA1Q99502 592 aa18.12■□□□□ 0.49
SNRNP200-204ENST00000480615 WNK3Q9BYP7 1800 aa18.12■□□□□ 0.49
SNRNP200-204ENST00000480615 SEPT12Q8IYM1 358 aa18.11■□□□□ 0.49
SNRNP200-204ENST00000480615 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
SNRNP200-204ENST00000480615 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
SNRNP200-204ENST00000480615 IL13P35225 146 aa18.1■□□□□ 0.49
SNRNP200-204ENST00000480615 ILDR2Q71H61 639 aa18.1■□□□□ 0.49
SNRNP200-204ENST00000480615 THRAP3Q9Y2W1 955 aaKnown RBP18.1■□□□□ 0.49
SNRNP200-204ENST00000480615 BRWD3Q6RI45 1802 aa18.1■□□□□ 0.49
SNRNP200-204ENST00000480615 BARGINQ6ZT62 677 aa18.09■□□□□ 0.49
SNRNP200-204ENST00000480615 THSD7AQ9UPZ6 1657 aa18.08■□□□□ 0.49
SNRNP200-204ENST00000480615 EP400Q96L91 3159 aa18.07■□□□□ 0.48
SNRNP200-204ENST00000480615 HMOX1P09601 288 aa18.07■□□□□ 0.48
SNRNP200-204ENST00000480615 IL2RBP14784 551 aa18.07■□□□□ 0.48
SNRNP200-204ENST00000480615 AEBP1Q8IUX7 1158 aa18.07■□□□□ 0.48
SNRNP200-204ENST00000480615 RGPD1P0DJD0 1748 aa18.06■□□□□ 0.48
SNRNP200-204ENST00000480615 ONECUT3O60422 494 aaPredicted RBP18.06■□□□□ 0.48
SNRNP200-204ENST00000480615 FAM182BQ5T319 152 aa18.06■□□□□ 0.48
SNRNP200-204ENST00000480615 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
SNRNP200-204ENST00000480615 RAPGEF4Q8WZA2 1011 aa18.06■□□□□ 0.48
SNRNP200-204ENST00000480615 IGSF1Q8N6C5 1336 aa18.06■□□□□ 0.48
SNRNP200-204ENST00000480615 MEGF6O75095 1541 aa18.06■□□□□ 0.48
SNRNP200-204ENST00000480615 LRRC37A3O60309 1634 aa18.06■□□□□ 0.48
SNRNP200-204ENST00000480615 DISP2A7MBM2 1401 aa18.05■□□□□ 0.48
SNRNP200-204ENST00000480615 PARP4Q9UKK3 1724 aaKnown RBP18.05■□□□□ 0.48
SNRNP200-204ENST00000480615 DDB1Q16531 1140 aa18.04■□□□□ 0.48
SNRNP200-204ENST00000480615 U2AF1L5P0DN76 240 aaPredicted RBP18.03■□□□□ 0.48
SNRNP200-204ENST00000480615 TATP17735 454 aaPredicted RBP18.03■□□□□ 0.48
SNRNP200-204ENST00000480615 U2AF1Q01081 240 aaKnown RBP eCLIP18.03■□□□□ 0.48
SNRNP200-204ENST00000480615 CCDC184Q52MB2 194 aa18.03■□□□□ 0.48
SNRNP200-204ENST00000480615 NUDCQ9Y266 331 aa18.03■□□□□ 0.48
SNRNP200-204ENST00000480615 PDE3BQ13370 1112 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms