RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 CCDC9Q9Y3X0 531 aaKnown RBP20.76■□□□□ 0.91
ABCF3-213ENST00000480539 RRS1Q15050 365 aaKnown RBP20.75■□□□□ 0.91
ABCF3-213ENST00000480539 VPS72Q15906 364 aa20.75■□□□□ 0.91
ABCF3-213ENST00000480539 MAP3K19Q56UN5 1328 aa20.75■□□□□ 0.91
ABCF3-213ENST00000480539 RXRBP28702 533 aa20.74■□□□□ 0.91
ABCF3-213ENST00000480539 AMER1Q5JTC6 1135 aaPredicted RBP20.74■□□□□ 0.91
ABCF3-213ENST00000480539 PEAK1Q9H792 1746 aa20.74■□□□□ 0.91
ABCF3-213ENST00000480539 AXIN2Q9Y2T1 843 aa20.74■□□□□ 0.91
ABCF3-213ENST00000480539 RGS12O14924 1447 aa20.73■□□□□ 0.91
ABCF3-213ENST00000480539 PER1O15534 1290 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-213ENST00000480539 TNNT2P45379 298 aaPredicted RBP20.73■□□□□ 0.91
ABCF3-213ENST00000480539 RBM6P78332 1123 aaKnown RBP20.72■□□□□ 0.91
ABCF3-213ENST00000480539 RTL1A6NKG5 1358 aa20.72■□□□□ 0.91
ABCF3-213ENST00000480539 EVA1CP58658 441 aa20.71■□□□□ 0.91
ABCF3-213ENST00000480539 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
ABCF3-213ENST00000480539 LARP1Q6PKG0 1096 aaKnown RBP20.71■□□□□ 0.91
ABCF3-213ENST00000480539 GJD4Q96KN9 370 aaPredicted RBP20.71■□□□□ 0.91
ABCF3-213ENST00000480539 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.9
ABCF3-213ENST00000480539 EMILIN1Q9Y6C2 1016 aa20.7■□□□□ 0.9
ABCF3-213ENST00000480539 BLMP54132 1417 aaPredicted RBP20.7■□□□□ 0.9
ABCF3-213ENST00000480539 CDK12Q9NYV4 1490 aaPredicted RBP20.69■□□□□ 0.9
ABCF3-213ENST00000480539 AMPHP49418 695 aa20.69■□□□□ 0.9
ABCF3-213ENST00000480539 MORC1Q86VD1 984 aa20.69■□□□□ 0.9
ABCF3-213ENST00000480539 SPATA31A5Q5VU36 1347 aa20.69■□□□□ 0.9
ABCF3-213ENST00000480539 SPATA31A7Q8IWB4 1347 aa20.69■□□□□ 0.9
ABCF3-213ENST00000480539 CRB1P82279 1406 aa20.69■□□□□ 0.9
ABCF3-213ENST00000480539 HOXC9P31274 260 aa20.68■□□□□ 0.9
ABCF3-213ENST00000480539 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
ABCF3-213ENST00000480539 IP6K1Q92551 441 aa20.67■□□□□ 0.9
ABCF3-213ENST00000480539 USP35Q9P2H5 1018 aa20.67■□□□□ 0.9
ABCF3-213ENST00000480539 ERBB3P21860 1342 aa20.67■□□□□ 0.9
ABCF3-213ENST00000480539 SPATA31A1Q5TZJ5 1347 aa20.67■□□□□ 0.9
ABCF3-213ENST00000480539 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
ABCF3-213ENST00000480539 FLT4P35916 1363 aa20.67■□□□□ 0.9
ABCF3-213ENST00000480539 ANKRD24Q8TF21 1146 aa20.66■□□□□ 0.9
ABCF3-213ENST00000480539 NPC1L1Q9UHC9 1359 aa20.66■□□□□ 0.9
ABCF3-213ENST00000480539 THSD7AQ9UPZ6 1657 aa20.65■□□□□ 0.9
ABCF3-213ENST00000480539 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
ABCF3-213ENST00000480539 FAM98CQ17RN3 349 aaKnown RBP20.65■□□□□ 0.9
ABCF3-213ENST00000480539 TOM1L2Q6ZVM7 507 aa20.65■□□□□ 0.9
ABCF3-213ENST00000480539 MAP2P11137 1827 aaKnown RBP20.64■□□□□ 0.9
ABCF3-213ENST00000480539 WNK3Q9BYP7 1800 aa20.64■□□□□ 0.9
ABCF3-213ENST00000480539 FAM208AQ9UK61 1670 aaKnown RBP20.64■□□□□ 0.9
ABCF3-213ENST00000480539 SMG6Q86US8 1419 aaKnown RBP20.64■□□□□ 0.89
ABCF3-213ENST00000480539 PPM1GO15355 546 aaPredicted RBP20.64■□□□□ 0.89
ABCF3-213ENST00000480539 LTV1Q96GA3 475 aaPredicted RBP20.64■□□□□ 0.89
ABCF3-213ENST00000480539 KIF24Q5T7B8 1368 aa20.63■□□□□ 0.89
ABCF3-213ENST00000480539 A0A0G2JS52 829 aa20.63■□□□□ 0.89
ABCF3-213ENST00000480539 MYT1Q01538 1121 aa20.63■□□□□ 0.89
ABCF3-213ENST00000480539 POLKQ9UBT6 870 aa20.63■□□□□ 0.89
ABCF3-213ENST00000480539 ZNF316A6NFI3 1004 aaPredicted RBP20.62■□□□□ 0.89
ABCF3-213ENST00000480539 INSRP06213 1382 aa20.61■□□□□ 0.89
ABCF3-213ENST00000480539 HSP90AB2PQ58FF8 381 aa20.6■□□□□ 0.89
ABCF3-213ENST00000480539 TCP11L2Q8N4U5 519 aa20.6■□□□□ 0.89
ABCF3-213ENST00000480539 NLRP2Q9NX02 1062 aa20.6■□□□□ 0.89
ABCF3-213ENST00000480539 RGPD2P0DJD1 1756 aa20.59■□□□□ 0.89
ABCF3-213ENST00000480539 SEPT12Q8IYM1 358 aa20.59■□□□□ 0.89
ABCF3-213ENST00000480539 BRWD3Q6RI45 1802 aa20.59■□□□□ 0.89
ABCF3-213ENST00000480539 LRRC37A3O60309 1634 aa20.58■□□□□ 0.89
ABCF3-213ENST00000480539 CARD10Q9BWT7 1032 aa20.58■□□□□ 0.89
ABCF3-213ENST00000480539 PARP4Q9UKK3 1724 aaKnown RBP20.57■□□□□ 0.88
ABCF3-213ENST00000480539 BARGINQ6ZT62 677 aa20.56■□□□□ 0.88
ABCF3-213ENST00000480539 THRAP3Q9Y2W1 955 aaKnown RBP20.56■□□□□ 0.88
ABCF3-213ENST00000480539 DISP2A7MBM2 1401 aa20.55■□□□□ 0.88
ABCF3-213ENST00000480539 ONECUT3O60422 494 aaPredicted RBP20.54■□□□□ 0.88
ABCF3-213ENST00000480539 USHBP1Q8N6Y0 703 aa20.54■□□□□ 0.88
ABCF3-213ENST00000480539 PARD3Q8TEW0 1356 aa20.52■□□□□ 0.88
ABCF3-213ENST00000480539 EIF4A2Q14240 407 aaKnown RBP20.52■□□□□ 0.88
ABCF3-213ENST00000480539 MTHFSP49914 203 aa20.51■□□□□ 0.87
ABCF3-213ENST00000480539 NBPF6Q5VWK0 638 aa20.51■□□□□ 0.87
ABCF3-213ENST00000480539 NBPF4Q96M43 638 aa20.51■□□□□ 0.87
ABCF3-213ENST00000480539 MEGF6O75095 1541 aa20.5■□□□□ 0.87
ABCF3-213ENST00000480539 KRT27Q7Z3Y8 459 aa20.49■□□□□ 0.87
ABCF3-213ENST00000480539 TNS2Q63HR2 1409 aa20.49■□□□□ 0.87
ABCF3-213ENST00000480539 COL3A1P02461 1466 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-213ENST00000480539 NCAPD2Q15021 1401 aa20.48■□□□□ 0.87
ABCF3-213ENST00000480539 IL2RBP14784 551 aa20.47■□□□□ 0.87
ABCF3-213ENST00000480539 PPP2R1AP30153 589 aa20.47■□□□□ 0.87
ABCF3-213ENST00000480539 RGPD1P0DJD0 1748 aa20.47■□□□□ 0.87
ABCF3-213ENST00000480539 FAM182BQ5T319 152 aa20.46■□□□□ 0.87
ABCF3-213ENST00000480539 CDCA7Q9BWT1 371 aaPredicted RBP20.46■□□□□ 0.87
ABCF3-213ENST00000480539 DDB1Q16531 1140 aa20.45■□□□□ 0.86
ABCF3-213ENST00000480539 EYA1Q99502 592 aa20.45■□□□□ 0.86
ABCF3-213ENST00000480539 OVOS2A0A0G2JMS6 1433 aa20.44■□□□□ 0.86
ABCF3-213ENST00000480539 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
ABCF3-213ENST00000480539 IGSF1Q8N6C5 1336 aa20.44■□□□□ 0.86
ABCF3-213ENST00000480539 SOCS7O14512 581 aa20.43■□□□□ 0.86
ABCF3-213ENST00000480539 SHANK3Q9BYB0 1731 aa20.43■□□□□ 0.86
ABCF3-213ENST00000480539 IL13P35225 146 aa20.42■□□□□ 0.86
ABCF3-213ENST00000480539 RALBP1Q15311 655 aa20.41■□□□□ 0.86
ABCF3-213ENST00000480539 RAPGEF4Q8WZA2 1011 aa20.41■□□□□ 0.86
ABCF3-213ENST00000480539 EP400Q96L91 3159 aa20.41■□□□□ 0.86
ABCF3-213ENST00000480539 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
ABCF3-213ENST00000480539 TATP17735 454 aaPredicted RBP20.4■□□□□ 0.86
ABCF3-213ENST00000480539 PKD1L3Q7Z443 1732 aa20.4■□□□□ 0.86
ABCF3-213ENST00000480539 EXOC5O00471 708 aa20.39■□□□□ 0.85
ABCF3-213ENST00000480539 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
ABCF3-213ENST00000480539 CFAP53Q96M91 514 aa20.39■□□□□ 0.85
ABCF3-213ENST00000480539 MARCH10Q8NA82 808 aaPredicted RBP20.38■□□□□ 0.85
ABCF3-213ENST00000480539 MYBBP1AQ9BQG0 1328 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms