RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 AMPHP49418 695 aa16.96■□□□□ 0.31
DDX56-209ENST00000473924 GJD4Q96KN9 370 aaPredicted RBP16.96■□□□□ 0.31
DDX56-209ENST00000473924 ANKRD26Q9UPS8 1709 aa16.96■□□□□ 0.3
DDX56-209ENST00000473924 PER1O15534 1290 aaPredicted RBP16.95■□□□□ 0.3
DDX56-209ENST00000473924 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
DDX56-209ENST00000473924 RRS1Q15050 365 aaKnown RBP16.95■□□□□ 0.3
DDX56-209ENST00000473924 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
DDX56-209ENST00000473924 AXIN2Q9Y2T1 843 aa16.95■□□□□ 0.3
DDX56-209ENST00000473924 MAP3K19Q56UN5 1328 aa16.95■□□□□ 0.3
DDX56-209ENST00000473924 CSB-PGBD3P0DP91 1061 aa16.94■□□□□ 0.3
DDX56-209ENST00000473924 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
DDX56-209ENST00000473924 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
DDX56-209ENST00000473924 COL18A1P39060 1754 aa16.94■□□□□ 0.3
DDX56-209ENST00000473924 COL5A2P05997 1499 aaPredicted RBP16.93■□□□□ 0.3
DDX56-209ENST00000473924 ABCC6O95255 1503 aa16.93■□□□□ 0.3
DDX56-209ENST00000473924 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
DDX56-209ENST00000473924 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
DDX56-209ENST00000473924 IP6K1Q92551 441 aa16.92■□□□□ 0.3
DDX56-209ENST00000473924 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
DDX56-209ENST00000473924 SPATA31A5Q5VU36 1347 aa16.92■□□□□ 0.3
DDX56-209ENST00000473924 SPATA31A7Q8IWB4 1347 aa16.92■□□□□ 0.3
DDX56-209ENST00000473924 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
DDX56-209ENST00000473924 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
DDX56-209ENST00000473924 HOXC9P31274 260 aa16.91■□□□□ 0.3
DDX56-209ENST00000473924 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
DDX56-209ENST00000473924 GLI3P10071 1580 aa16.9■□□□□ 0.3
DDX56-209ENST00000473924 BLMP54132 1417 aaPredicted RBP16.9■□□□□ 0.3
DDX56-209ENST00000473924 A0A0G2JS52 829 aa16.9■□□□□ 0.3
DDX56-209ENST00000473924 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
DDX56-209ENST00000473924 MYT1Q01538 1121 aa16.9■□□□□ 0.3
DDX56-209ENST00000473924 DDX10Q13206 875 aaKnown RBP16.9■□□□□ 0.3
DDX56-209ENST00000473924 SPATA31A1Q5TZJ5 1347 aa16.9■□□□□ 0.3
DDX56-209ENST00000473924 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
DDX56-209ENST00000473924 RTL1A6NKG5 1358 aa16.89■□□□□ 0.3
DDX56-209ENST00000473924 CRB1P82279 1406 aa16.89■□□□□ 0.29
DDX56-209ENST00000473924 ANKRD24Q8TF21 1146 aa16.89■□□□□ 0.29
DDX56-209ENST00000473924 LTV1Q96GA3 475 aaPredicted RBP16.89■□□□□ 0.29
DDX56-209ENST00000473924 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
DDX56-209ENST00000473924 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.29
DDX56-209ENST00000473924 CDK12Q9NYV4 1490 aaPredicted RBP16.88■□□□□ 0.29
DDX56-209ENST00000473924 FAM98CQ17RN3 349 aaKnown RBP16.88■□□□□ 0.29
DDX56-209ENST00000473924 MAP2P11137 1827 aaKnown RBP16.88■□□□□ 0.29
DDX56-209ENST00000473924 ERBB3P21860 1342 aa16.88■□□□□ 0.29
DDX56-209ENST00000473924 FLT4P35916 1363 aa16.88■□□□□ 0.29
DDX56-209ENST00000473924 KIF24Q5T7B8 1368 aa16.88■□□□□ 0.29
DDX56-209ENST00000473924 TCP11L2Q8N4U5 519 aa16.87■□□□□ 0.29
DDX56-209ENST00000473924 NLRP2Q9NX02 1062 aa16.87■□□□□ 0.29
DDX56-209ENST00000473924 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
DDX56-209ENST00000473924 RGS12O14924 1447 aa16.87■□□□□ 0.29
DDX56-209ENST00000473924 SMG6Q86US8 1419 aaKnown RBP16.86■□□□□ 0.29
DDX56-209ENST00000473924 HSP90AB2PQ58FF8 381 aa16.85■□□□□ 0.29
DDX56-209ENST00000473924 SEPT12Q8IYM1 358 aa16.85■□□□□ 0.29
DDX56-209ENST00000473924 CARD10Q9BWT7 1032 aa16.85■□□□□ 0.29
DDX56-209ENST00000473924 THRAP3Q9Y2W1 955 aaKnown RBP16.85■□□□□ 0.29
DDX56-209ENST00000473924 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
DDX56-209ENST00000473924 INSRP06213 1382 aa16.84■□□□□ 0.29
DDX56-209ENST00000473924 ONECUT3O60422 494 aaPredicted RBP16.83■□□□□ 0.28
DDX56-209ENST00000473924 BARGINQ6ZT62 677 aa16.83■□□□□ 0.28
DDX56-209ENST00000473924 FAM208AQ9UK61 1670 aaKnown RBP16.81■□□□□ 0.28
DDX56-209ENST00000473924 MTHFSP49914 203 aa16.79■□□□□ 0.28
DDX56-209ENST00000473924 CDCA7Q9BWT1 371 aaPredicted RBP16.79■□□□□ 0.28
DDX56-209ENST00000473924 THSD7AQ9UPZ6 1657 aa16.78■□□□□ 0.28
DDX56-209ENST00000473924 KRT27Q7Z3Y8 459 aa16.78■□□□□ 0.28
DDX56-209ENST00000473924 PDE3BQ13370 1112 aa16.77■□□□□ 0.28
DDX56-209ENST00000473924 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
DDX56-209ENST00000473924 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
DDX56-209ENST00000473924 BRWD3Q6RI45 1802 aa16.77■□□□□ 0.27
DDX56-209ENST00000473924 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.27
DDX56-209ENST00000473924 IL2RBP14784 551 aa16.76■□□□□ 0.27
DDX56-209ENST00000473924 EIF4A2Q14240 407 aaKnown RBP16.76■□□□□ 0.27
DDX56-209ENST00000473924 DDB1Q16531 1140 aa16.76■□□□□ 0.27
DDX56-209ENST00000473924 USHBP1Q8N6Y0 703 aa16.76■□□□□ 0.27
DDX56-209ENST00000473924 WNK3Q9BYP7 1800 aa16.75■□□□□ 0.27
DDX56-209ENST00000473924 PARP4Q9UKK3 1724 aaKnown RBP16.74■□□□□ 0.27
DDX56-209ENST00000473924 EXOC5O00471 708 aa16.74■□□□□ 0.27
DDX56-209ENST00000473924 PPP2R1AP30153 589 aa16.74■□□□□ 0.27
DDX56-209ENST00000473924 DISP2A7MBM2 1401 aa16.73■□□□□ 0.27
DDX56-209ENST00000473924 RALBP1Q15311 655 aa16.73■□□□□ 0.27
DDX56-209ENST00000473924 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
DDX56-209ENST00000473924 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
DDX56-209ENST00000473924 EYA1Q99502 592 aa16.73■□□□□ 0.27
DDX56-209ENST00000473924 PARD3Q8TEW0 1356 aa16.73■□□□□ 0.27
DDX56-209ENST00000473924 LRRC37A3O60309 1634 aa16.72■□□□□ 0.27
DDX56-209ENST00000473924 DIAPH1O60610 1272 aaKnown RBP16.71■□□□□ 0.27
DDX56-209ENST00000473924 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.27
DDX56-209ENST00000473924 FAM182BQ5T319 152 aa16.71■□□□□ 0.27
DDX56-209ENST00000473924 IL13P35225 146 aa16.69■□□□□ 0.26
DDX56-209ENST00000473924 TNS2Q63HR2 1409 aa16.69■□□□□ 0.26
DDX56-209ENST00000473924 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
DDX56-209ENST00000473924 MEGF6O75095 1541 aa16.68■□□□□ 0.26
DDX56-209ENST00000473924 U2SURPO15042 1029 aaKnown RBP16.67■□□□□ 0.26
DDX56-209ENST00000473924 FAM196AQ6ZSG2 479 aa16.67■□□□□ 0.26
DDX56-209ENST00000473924 ZCRB1Q8TBF4 217 aaKnown RBP16.67■□□□□ 0.26
DDX56-209ENST00000473924 OVOS2A0A0G2JMS6 1433 aa16.67■□□□□ 0.26
DDX56-209ENST00000473924 NCAPD2Q15021 1401 aa16.67■□□□□ 0.26
DDX56-209ENST00000473924 SULT6B1Q6IMI4 303 aa16.66■□□□□ 0.26
DDX56-209ENST00000473924 MARCH10Q8NA82 808 aaPredicted RBP16.66■□□□□ 0.26
DDX56-209ENST00000473924 DDX54Q8TDD1 881 aaKnown RBP16.66■□□□□ 0.26
DDX56-209ENST00000473924 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
DDX56-209ENST00000473924 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms