RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 CAMTA1Q9Y6Y1 1673 aa16.78■□□□□ 0.28
PRKCB-205ENST00000472066 HOXC9P31274 260 aa16.77■□□□□ 0.28
PRKCB-205ENST00000472066 VPS72Q15906 364 aa16.77■□□□□ 0.28
PRKCB-205ENST00000472066 STRN4Q9NRL3 753 aa16.77■□□□□ 0.28
PRKCB-205ENST00000472066 EMILIN1Q9Y6C2 1016 aa16.77■□□□□ 0.28
PRKCB-205ENST00000472066 ATRNO75882 1429 aa16.76■□□□□ 0.27
PRKCB-205ENST00000472066 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
PRKCB-205ENST00000472066 GJD4Q96KN9 370 aaPredicted RBP16.75■□□□□ 0.27
PRKCB-205ENST00000472066 LMO7Q8WWI1 1683 aa16.75■□□□□ 0.27
PRKCB-205ENST00000472066 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
PRKCB-205ENST00000472066 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
PRKCB-205ENST00000472066 PLCH1Q4KWH8 1693 aa16.74■□□□□ 0.27
PRKCB-205ENST00000472066 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
PRKCB-205ENST00000472066 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
PRKCB-205ENST00000472066 COL18A1P39060 1754 aa16.74■□□□□ 0.27
PRKCB-205ENST00000472066 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
PRKCB-205ENST00000472066 RXRBP28702 533 aa16.73■□□□□ 0.27
PRKCB-205ENST00000472066 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
PRKCB-205ENST00000472066 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
PRKCB-205ENST00000472066 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
PRKCB-205ENST00000472066 ABCC6O95255 1503 aa16.73■□□□□ 0.27
PRKCB-205ENST00000472066 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
PRKCB-205ENST00000472066 SPATA31A5Q5VU36 1347 aa16.72■□□□□ 0.27
PRKCB-205ENST00000472066 SPATA31A7Q8IWB4 1347 aa16.72■□□□□ 0.27
PRKCB-205ENST00000472066 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
PRKCB-205ENST00000472066 BLMP54132 1417 aaPredicted RBP16.72■□□□□ 0.27
PRKCB-205ENST00000472066 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
PRKCB-205ENST00000472066 ANKRD26Q9UPS8 1709 aa16.72■□□□□ 0.27
PRKCB-205ENST00000472066 FLT4P35916 1363 aa16.72■□□□□ 0.27
PRKCB-205ENST00000472066 TOM1L2Q6ZVM7 507 aa16.71■□□□□ 0.27
PRKCB-205ENST00000472066 LTV1Q96GA3 475 aaPredicted RBP16.71■□□□□ 0.27
PRKCB-205ENST00000472066 ERBB3P21860 1342 aa16.7■□□□□ 0.26
PRKCB-205ENST00000472066 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
PRKCB-205ENST00000472066 INSRP06213 1382 aa16.7■□□□□ 0.26
PRKCB-205ENST00000472066 MTHFSP49914 203 aa16.7■□□□□ 0.26
PRKCB-205ENST00000472066 NRAPQ86VF7 1730 aa16.7■□□□□ 0.26
PRKCB-205ENST00000472066 USP35Q9P2H5 1018 aa16.69■□□□□ 0.26
PRKCB-205ENST00000472066 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.69■□□□□ 0.26
PRKCB-205ENST00000472066 CRB1P82279 1406 aa16.69■□□□□ 0.26
PRKCB-205ENST00000472066 LTN1O94822 1766 aa16.69■□□□□ 0.26
PRKCB-205ENST00000472066 PPP2R1AP30153 589 aa16.68■□□□□ 0.26
PRKCB-205ENST00000472066 CARD10Q9BWT7 1032 aa16.68■□□□□ 0.26
PRKCB-205ENST00000472066 NLRP2Q9NX02 1062 aa16.68■□□□□ 0.26
PRKCB-205ENST00000472066 SMG6Q86US8 1419 aaKnown RBP16.68■□□□□ 0.26
PRKCB-205ENST00000472066 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
PRKCB-205ENST00000472066 PARD3Q8TEW0 1356 aa16.67■□□□□ 0.26
PRKCB-205ENST00000472066 ONECUT3O60422 494 aaPredicted RBP16.67■□□□□ 0.26
PRKCB-205ENST00000472066 RALBP1Q15311 655 aa16.67■□□□□ 0.26
PRKCB-205ENST00000472066 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
PRKCB-205ENST00000472066 THRAP3Q9Y2W1 955 aaKnown RBP16.67■□□□□ 0.26
PRKCB-205ENST00000472066 FAM98CQ17RN3 349 aaKnown RBP16.66■□□□□ 0.26
PRKCB-205ENST00000472066 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
PRKCB-205ENST00000472066 NBPF6Q5VWK0 638 aa16.65■□□□□ 0.26
PRKCB-205ENST00000472066 BARGINQ6ZT62 677 aa16.65■□□□□ 0.26
PRKCB-205ENST00000472066 NBPF4Q96M43 638 aa16.65■□□□□ 0.26
PRKCB-205ENST00000472066 GLI3P10071 1580 aa16.64■□□□□ 0.25
PRKCB-205ENST00000472066 CDK12Q9NYV4 1490 aaPredicted RBP16.63■□□□□ 0.25
PRKCB-205ENST00000472066 ILDR2Q71H61 639 aa16.63■□□□□ 0.25
PRKCB-205ENST00000472066 PRKRIP1Q9H875 184 aaPredicted RBP16.63■□□□□ 0.25
PRKCB-205ENST00000472066 RGPD5Q99666 1765 aa16.63■□□□□ 0.25
PRKCB-205ENST00000472066 MAP2P11137 1827 aaKnown RBP16.63■□□□□ 0.25
PRKCB-205ENST00000472066 SEPT12Q8IYM1 358 aa16.62■□□□□ 0.25
PRKCB-205ENST00000472066 EYA1Q99502 592 aa16.62■□□□□ 0.25
PRKCB-205ENST00000472066 IL13P35225 146 aa16.61■□□□□ 0.25
PRKCB-205ENST00000472066 RGS12O14924 1447 aa16.61■□□□□ 0.25
PRKCB-205ENST00000472066 A0A0G2JS52 829 aa16.6■□□□□ 0.25
PRKCB-205ENST00000472066 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
PRKCB-205ENST00000472066 MYT1Q01538 1121 aa16.6■□□□□ 0.25
PRKCB-205ENST00000472066 USHBP1Q8N6Y0 703 aa16.6■□□□□ 0.25
PRKCB-205ENST00000472066 CFAP53Q96M91 514 aa16.6■□□□□ 0.25
PRKCB-205ENST00000472066 CDCA7Q9BWT1 371 aaPredicted RBP16.6■□□□□ 0.25
PRKCB-205ENST00000472066 MYBBP1AQ9BQG0 1328 aaKnown RBP16.59■□□□□ 0.25
PRKCB-205ENST00000472066 IL2RBP14784 551 aa16.58■□□□□ 0.24
PRKCB-205ENST00000472066 DISP2A7MBM2 1401 aa16.57■□□□□ 0.24
PRKCB-205ENST00000472066 IGSF1Q8N6C5 1336 aa16.57■□□□□ 0.24
PRKCB-205ENST00000472066 ANP32CO43423 234 aa16.57■□□□□ 0.24
PRKCB-205ENST00000472066 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
PRKCB-205ENST00000472066 EXOC5O00471 708 aa16.55■□□□□ 0.24
PRKCB-205ENST00000472066 DDB1Q16531 1140 aa16.55■□□□□ 0.24
PRKCB-205ENST00000472066 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
PRKCB-205ENST00000472066 NCAPD2Q15021 1401 aa16.54■□□□□ 0.24
PRKCB-205ENST00000472066 FAM208AQ9UK61 1670 aaKnown RBP16.54■□□□□ 0.24
PRKCB-205ENST00000472066 KRT27Q7Z3Y8 459 aa16.54■□□□□ 0.24
PRKCB-205ENST00000472066 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
PRKCB-205ENST00000472066 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
PRKCB-205ENST00000472066 TATP17735 454 aaPredicted RBP16.53■□□□□ 0.24
PRKCB-205ENST00000472066 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
PRKCB-205ENST00000472066 SULT6B1Q6IMI4 303 aa16.53■□□□□ 0.24
PRKCB-205ENST00000472066 NUDCQ9Y266 331 aa16.53■□□□□ 0.24
PRKCB-205ENST00000472066 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.24
PRKCB-205ENST00000472066 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
PRKCB-205ENST00000472066 MEGF6O75095 1541 aa16.5■□□□□ 0.23
PRKCB-205ENST00000472066 HMOX1P09601 288 aa16.5■□□□□ 0.23
PRKCB-205ENST00000472066 RGPD2P0DJD1 1756 aa16.5■□□□□ 0.23
PRKCB-205ENST00000472066 OVOS2A0A0G2JMS6 1433 aa16.5■□□□□ 0.23
PRKCB-205ENST00000472066 KDRP35968 1356 aa16.5■□□□□ 0.23
PRKCB-205ENST00000472066 FAM182BQ5T319 152 aa16.49■□□□□ 0.23
PRKCB-205ENST00000472066 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
PRKCB-205ENST00000472066 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
PRKCB-205ENST00000472066 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms