RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ZBTB7CA1YPR0 619 aa20.71■□□□□ 0.91
SNX13-205ENST00000471744 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.91
SNX13-205ENST00000471744 CDK12Q9NYV4 1490 aaPredicted RBP20.7■□□□□ 0.9
SNX13-205ENST00000471744 RGPD5Q99666 1765 aa20.69■□□□□ 0.9
SNX13-205ENST00000471744 EVA1CP58658 441 aa20.69■□□□□ 0.9
SNX13-205ENST00000471744 GJD4Q96KN9 370 aaPredicted RBP20.69■□□□□ 0.9
SNX13-205ENST00000471744 COL5A2P05997 1499 aaPredicted RBP20.68■□□□□ 0.9
SNX13-205ENST00000471744 CCDC9Q9Y3X0 531 aaKnown RBP20.67■□□□□ 0.9
SNX13-205ENST00000471744 MAP2P11137 1827 aaKnown RBP20.67■□□□□ 0.9
SNX13-205ENST00000471744 PER1O15534 1290 aaPredicted RBP20.66■□□□□ 0.9
SNX13-205ENST00000471744 STRN4Q9NRL3 753 aa20.66■□□□□ 0.9
SNX13-205ENST00000471744 RTL1A6NKG5 1358 aa20.66■□□□□ 0.9
SNX13-205ENST00000471744 KIF24Q5T7B8 1368 aa20.66■□□□□ 0.9
SNX13-205ENST00000471744 BLMP54132 1417 aaPredicted RBP20.66■□□□□ 0.9
SNX13-205ENST00000471744 GLI3P10071 1580 aa20.65■□□□□ 0.9
SNX13-205ENST00000471744 NPC1L1Q9UHC9 1359 aa20.65■□□□□ 0.9
SNX13-205ENST00000471744 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
SNX13-205ENST00000471744 MAP3K19Q56UN5 1328 aa20.64■□□□□ 0.89
SNX13-205ENST00000471744 SPATA31A5Q5VU36 1347 aa20.64■□□□□ 0.89
SNX13-205ENST00000471744 SPATA31A7Q8IWB4 1347 aa20.64■□□□□ 0.89
SNX13-205ENST00000471744 IP6K1Q92551 441 aa20.64■□□□□ 0.89
SNX13-205ENST00000471744 AMPHP49418 695 aa20.63■□□□□ 0.89
SNX13-205ENST00000471744 AXIN2Q9Y2T1 843 aa20.63■□□□□ 0.89
SNX13-205ENST00000471744 WDR17Q8IZU2 1322 aa20.62■□□□□ 0.89
SNX13-205ENST00000471744 MORC1Q86VD1 984 aa20.62■□□□□ 0.89
SNX13-205ENST00000471744 CRB1P82279 1406 aa20.61■□□□□ 0.89
SNX13-205ENST00000471744 FAM208AQ9UK61 1670 aaKnown RBP20.61■□□□□ 0.89
SNX13-205ENST00000471744 SPATA31A1Q5TZJ5 1347 aa20.61■□□□□ 0.89
SNX13-205ENST00000471744 HOXC9P31274 260 aa20.6■□□□□ 0.89
SNX13-205ENST00000471744 RRS1Q15050 365 aaKnown RBP20.6■□□□□ 0.89
SNX13-205ENST00000471744 LARP1Q6PKG0 1096 aaKnown RBP20.6■□□□□ 0.89
SNX13-205ENST00000471744 THRAP3Q9Y2W1 955 aaKnown RBP20.6■□□□□ 0.89
SNX13-205ENST00000471744 FLT4P35916 1363 aa20.59■□□□□ 0.89
SNX13-205ENST00000471744 ERBB3P21860 1342 aa20.59■□□□□ 0.89
SNX13-205ENST00000471744 CSB-PGBD3P0DP91 1061 aa20.59■□□□□ 0.89
SNX13-205ENST00000471744 FBLN1P23142 703 aa20.59■□□□□ 0.89
SNX13-205ENST00000471744 RGS12O14924 1447 aa20.59■□□□□ 0.89
SNX13-205ENST00000471744 ONECUT3O60422 494 aaPredicted RBP20.58■□□□□ 0.89
SNX13-205ENST00000471744 TOM1L2Q6ZVM7 507 aa20.58■□□□□ 0.89
SNX13-205ENST00000471744 TCP11L2Q8N4U5 519 aa20.57■□□□□ 0.88
SNX13-205ENST00000471744 ANKRD24Q8TF21 1146 aa20.57■□□□□ 0.88
SNX13-205ENST00000471744 PEAK1Q9H792 1746 aa20.56■□□□□ 0.88
SNX13-205ENST00000471744 SMG6Q86US8 1419 aaKnown RBP20.56■□□□□ 0.88
SNX13-205ENST00000471744 BARGINQ6ZT62 677 aa20.56■□□□□ 0.88
SNX13-205ENST00000471744 CARD10Q9BWT7 1032 aa20.56■□□□□ 0.88
SNX13-205ENST00000471744 INSRP06213 1382 aa20.56■□□□□ 0.88
SNX13-205ENST00000471744 TNNT2P45379 298 aaPredicted RBP20.55■□□□□ 0.88
SNX13-205ENST00000471744 CC2D1BQ5T0F9 858 aaKnown RBP20.55■□□□□ 0.88
SNX13-205ENST00000471744 POLKQ9UBT6 870 aa20.55■□□□□ 0.88
SNX13-205ENST00000471744 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
SNX13-205ENST00000471744 FAM98CQ17RN3 349 aaKnown RBP20.54■□□□□ 0.88
SNX13-205ENST00000471744 USP35Q9P2H5 1018 aa20.54■□□□□ 0.88
SNX13-205ENST00000471744 THSD7AQ9UPZ6 1657 aa20.54■□□□□ 0.88
SNX13-205ENST00000471744 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
SNX13-205ENST00000471744 ZNF316A6NFI3 1004 aaPredicted RBP20.53■□□□□ 0.88
SNX13-205ENST00000471744 SEPT12Q8IYM1 358 aa20.53■□□□□ 0.88
SNX13-205ENST00000471744 A0A0G2JS52 829 aa20.52■□□□□ 0.88
SNX13-205ENST00000471744 PPM1GO15355 546 aaPredicted RBP20.52■□□□□ 0.88
SNX13-205ENST00000471744 MYT1Q01538 1121 aa20.52■□□□□ 0.88
SNX13-205ENST00000471744 CDCA7Q9BWT1 371 aaPredicted RBP20.52■□□□□ 0.88
SNX13-205ENST00000471744 NLRP2Q9NX02 1062 aa20.52■□□□□ 0.88
SNX13-205ENST00000471744 BRWD3Q6RI45 1802 aa20.52■□□□□ 0.88
SNX13-205ENST00000471744 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
SNX13-205ENST00000471744 PARP4Q9UKK3 1724 aaKnown RBP20.5■□□□□ 0.87
SNX13-205ENST00000471744 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
SNX13-205ENST00000471744 LTV1Q96GA3 475 aaPredicted RBP20.5■□□□□ 0.87
SNX13-205ENST00000471744 RGPD2P0DJD1 1756 aa20.49■□□□□ 0.87
SNX13-205ENST00000471744 KRT27Q7Z3Y8 459 aa20.45■□□□□ 0.86
SNX13-205ENST00000471744 DISP2A7MBM2 1401 aa20.44■□□□□ 0.86
SNX13-205ENST00000471744 CNGB1Q14028 1251 aaPredicted RBP20.44■□□□□ 0.86
SNX13-205ENST00000471744 LRRC37A3O60309 1634 aa20.43■□□□□ 0.86
SNX13-205ENST00000471744 IL2RBP14784 551 aa20.43■□□□□ 0.86
SNX13-205ENST00000471744 MTHFSP49914 203 aa20.43■□□□□ 0.86
SNX13-205ENST00000471744 PDE3BQ13370 1112 aa20.42■□□□□ 0.86
SNX13-205ENST00000471744 DDB1Q16531 1140 aa20.42■□□□□ 0.86
SNX13-205ENST00000471744 NBPF6Q5VWK0 638 aa20.42■□□□□ 0.86
SNX13-205ENST00000471744 NBPF4Q96M43 638 aa20.42■□□□□ 0.86
SNX13-205ENST00000471744 PARD3Q8TEW0 1356 aa20.42■□□□□ 0.86
SNX13-205ENST00000471744 EIF4A2Q14240 407 aaKnown RBP20.41■□□□□ 0.86
SNX13-205ENST00000471744 NCAPD2Q15021 1401 aa20.4■□□□□ 0.86
SNX13-205ENST00000471744 RALBP1Q15311 655 aa20.4■□□□□ 0.86
SNX13-205ENST00000471744 TNS2Q63HR2 1409 aa20.39■□□□□ 0.85
SNX13-205ENST00000471744 EXOC5O00471 708 aa20.39■□□□□ 0.85
SNX13-205ENST00000471744 RAPGEF4Q8WZA2 1011 aa20.38■□□□□ 0.85
SNX13-205ENST00000471744 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
SNX13-205ENST00000471744 EYA1Q99502 592 aa20.38■□□□□ 0.85
SNX13-205ENST00000471744 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
SNX13-205ENST00000471744 PLEKHG2Q9H7P9 1386 aa20.36■□□□□ 0.85
SNX13-205ENST00000471744 IGSF1Q8N6C5 1336 aa20.36■□□□□ 0.85
SNX13-205ENST00000471744 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
SNX13-205ENST00000471744 TATP17735 454 aaPredicted RBP20.35■□□□□ 0.85
SNX13-205ENST00000471744 IL13P35225 146 aa20.35■□□□□ 0.85
SNX13-205ENST00000471744 FAM196AQ6ZSG2 479 aa20.35■□□□□ 0.85
SNX13-205ENST00000471744 USHBP1Q8N6Y0 703 aa20.35■□□□□ 0.85
SNX13-205ENST00000471744 RGPD1P0DJD0 1748 aa20.35■□□□□ 0.85
SNX13-205ENST00000471744 OVOS2A0A0G2JMS6 1433 aa20.35■□□□□ 0.85
SNX13-205ENST00000471744 MEGF6O75095 1541 aa20.34■□□□□ 0.85
SNX13-205ENST00000471744 COL3A1P02461 1466 aaPredicted RBP20.33■□□□□ 0.85
SNX13-205ENST00000471744 CCDC125Q86Z20 511 aa20.33■□□□□ 0.85
SNX13-205ENST00000471744 KAT6BQ8WYB5 2073 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms