RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 INSRP06213 1382 aa17.14■□□□□ 0.33
SND1-209ENST00000470723 CAMTA1Q9Y6Y1 1673 aa17.13■□□□□ 0.33
SND1-209ENST00000470723 TNNT2P45379 298 aaPredicted RBP17.13■□□□□ 0.33
SND1-209ENST00000470723 AMPHP49418 695 aa17.13■□□□□ 0.33
SND1-209ENST00000470723 PRKRIP1Q9H875 184 aaPredicted RBP17.13■□□□□ 0.33
SND1-209ENST00000470723 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
SND1-209ENST00000470723 AFF2P51816 1311 aa17.13■□□□□ 0.33
SND1-209ENST00000470723 LMO7Q8WWI1 1683 aa17.13■□□□□ 0.33
SND1-209ENST00000470723 RTL1A6NKG5 1358 aa17.13■□□□□ 0.33
SND1-209ENST00000470723 PPP2R1AP30153 589 aa17.12■□□□□ 0.33
SND1-209ENST00000470723 ZNF772Q68DY9 489 aaPredicted RBP17.12■□□□□ 0.33
SND1-209ENST00000470723 USP21Q9UK80 565 aa17.12■□□□□ 0.33
SND1-209ENST00000470723 SMG6Q86US8 1419 aaKnown RBP17.12■□□□□ 0.33
SND1-209ENST00000470723 NWD2Q9ULI1 1742 aa17.11■□□□□ 0.33
SND1-209ENST00000470723 LTN1O94822 1766 aa17.11■□□□□ 0.33
SND1-209ENST00000470723 MTHFSP49914 203 aa17.11■□□□□ 0.33
SND1-209ENST00000470723 HSP90AB2PQ58FF8 381 aa17.11■□□□□ 0.33
SND1-209ENST00000470723 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
SND1-209ENST00000470723 VPS72Q15906 364 aa17.1■□□□□ 0.33
SND1-209ENST00000470723 FLT4P35916 1363 aa17.1■□□□□ 0.33
SND1-209ENST00000470723 EVA1CP58658 441 aa17.08■□□□□ 0.32
SND1-209ENST00000470723 UPF1Q92900 1129 aaKnown RBP eCLIP17.08■□□□□ 0.32
SND1-209ENST00000470723 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.32
SND1-209ENST00000470723 TRPC5Q9UL62 973 aaPredicted RBP17.08■□□□□ 0.32
SND1-209ENST00000470723 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
SND1-209ENST00000470723 COL5A2P05997 1499 aaPredicted RBP17.07■□□□□ 0.32
SND1-209ENST00000470723 ERBB3P21860 1342 aa17.07■□□□□ 0.32
SND1-209ENST00000470723 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
SND1-209ENST00000470723 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
SND1-209ENST00000470723 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
SND1-209ENST00000470723 ATRNO75882 1429 aa17.06■□□□□ 0.32
SND1-209ENST00000470723 PPM1GO15355 546 aaPredicted RBP17.06■□□□□ 0.32
SND1-209ENST00000470723 ONECUT3O60422 494 aaPredicted RBP17.06■□□□□ 0.32
SND1-209ENST00000470723 CNGB1Q14028 1251 aaPredicted RBP17.06■□□□□ 0.32
SND1-209ENST00000470723 LARP1Q6PKG0 1096 aaKnown RBP17.06■□□□□ 0.32
SND1-209ENST00000470723 ANKRD24Q8TF21 1146 aa17.06■□□□□ 0.32
SND1-209ENST00000470723 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.06■□□□□ 0.32
SND1-209ENST00000470723 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
SND1-209ENST00000470723 SPATA31A5Q5VU36 1347 aa17.05■□□□□ 0.32
SND1-209ENST00000470723 SPATA31A7Q8IWB4 1347 aa17.05■□□□□ 0.32
SND1-209ENST00000470723 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
SND1-209ENST00000470723 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
SND1-209ENST00000470723 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
SND1-209ENST00000470723 ANP32CO43423 234 aa17.04■□□□□ 0.32
SND1-209ENST00000470723 IL13P35225 146 aa17.04■□□□□ 0.32
SND1-209ENST00000470723 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
SND1-209ENST00000470723 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
SND1-209ENST00000470723 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
SND1-209ENST00000470723 EIF4A2Q14240 407 aaKnown RBP17.03■□□□□ 0.32
SND1-209ENST00000470723 STRN4Q9NRL3 753 aa17.03■□□□□ 0.32
SND1-209ENST00000470723 THRAP3Q9Y2W1 955 aaKnown RBP17.03■□□□□ 0.32
SND1-209ENST00000470723 RBM6P78332 1123 aaKnown RBP17.02■□□□□ 0.32
SND1-209ENST00000470723 CRB1P82279 1406 aa17.02■□□□□ 0.31
SND1-209ENST00000470723 NBPF6Q5VWK0 638 aa17.01■□□□□ 0.31
SND1-209ENST00000470723 BARGINQ6ZT62 677 aa17.01■□□□□ 0.31
SND1-209ENST00000470723 NBPF4Q96M43 638 aa17.01■□□□□ 0.31
SND1-209ENST00000470723 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
SND1-209ENST00000470723 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
SND1-209ENST00000470723 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
SND1-209ENST00000470723 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
SND1-209ENST00000470723 LTV1Q96GA3 475 aaPredicted RBP17■□□□□ 0.31
SND1-209ENST00000470723 CFAP53Q96M91 514 aa17■□□□□ 0.31
SND1-209ENST00000470723 EYA1Q99502 592 aa17■□□□□ 0.31
SND1-209ENST00000470723 CSB-PGBD3P0DP91 1061 aa16.99■□□□□ 0.31
SND1-209ENST00000470723 NLRP2Q9NX02 1062 aa16.99■□□□□ 0.31
SND1-209ENST00000470723 COL3A1P02461 1466 aaPredicted RBP16.99■□□□□ 0.31
SND1-209ENST00000470723 NCAPD2Q15021 1401 aa16.98■□□□□ 0.31
SND1-209ENST00000470723 RXRBP28702 533 aa16.98■□□□□ 0.31
SND1-209ENST00000470723 CDCA7Q9BWT1 371 aaPredicted RBP16.97■□□□□ 0.31
SND1-209ENST00000470723 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.31
SND1-209ENST00000470723 FAM208AQ9UK61 1670 aaKnown RBP16.96■□□□□ 0.31
SND1-209ENST00000470723 NUDCQ9Y266 331 aa16.95■□□□□ 0.3
SND1-209ENST00000470723 CCDC9Q9Y3X0 531 aaKnown RBP16.95■□□□□ 0.3
SND1-209ENST00000470723 GLI3P10071 1580 aa16.94■□□□□ 0.3
SND1-209ENST00000470723 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
SND1-209ENST00000470723 KDRP35968 1356 aa16.93■□□□□ 0.3
SND1-209ENST00000470723 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
SND1-209ENST00000470723 PLEKHG2Q9H7P9 1386 aa16.92■□□□□ 0.3
SND1-209ENST00000470723 DISP2A7MBM2 1401 aa16.92■□□□□ 0.3
SND1-209ENST00000470723 RGPD1P0DJD0 1748 aa16.92■□□□□ 0.3
SND1-209ENST00000470723 FCHSD2O94868 740 aa16.91■□□□□ 0.3
SND1-209ENST00000470723 IL2RBP14784 551 aa16.91■□□□□ 0.3
SND1-209ENST00000470723 FAM98CQ17RN3 349 aaKnown RBP16.91■□□□□ 0.3
SND1-209ENST00000470723 CCDC184Q52MB2 194 aa16.91■□□□□ 0.3
SND1-209ENST00000470723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.91■□□□□ 0.31e-6■□□□□ 10.6
SND1-209ENST00000470723 CCER2I3L3R5 266 aa16.9■□□□□ 0.3
SND1-209ENST00000470723 SULT6B1Q6IMI4 303 aa16.9■□□□□ 0.3
SND1-209ENST00000470723 SEPT12Q8IYM1 358 aa16.9■□□□□ 0.3
SND1-209ENST00000470723 USHBP1Q8N6Y0 703 aa16.89■□□□□ 0.29
SND1-209ENST00000470723 PNISRQ8TF01 805 aaKnown RBP16.89■□□□□ 0.29
SND1-209ENST00000470723 EXOC5O00471 708 aa16.88■□□□□ 0.29
SND1-209ENST00000470723 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
SND1-209ENST00000470723 RAPGEF4Q8WZA2 1011 aa16.88■□□□□ 0.29
SND1-209ENST00000470723 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
SND1-209ENST00000470723 U2AF1L5P0DN76 240 aaPredicted RBP16.87■□□□□ 0.29
SND1-209ENST00000470723 TATP17735 454 aaPredicted RBP16.87■□□□□ 0.29
SND1-209ENST00000470723 U2AF1Q01081 240 aaKnown RBP eCLIP16.87■□□□□ 0.29
SND1-209ENST00000470723 THSD7AQ9UPZ6 1657 aa16.87■□□□□ 0.29
SND1-209ENST00000470723 MIER1Q8N108 512 aa16.86■□□□□ 0.29
SND1-209ENST00000470723 ZCRB1Q8TBF4 217 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms