RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 FAM83GA6ND36 823 aa19.84■□□□□ 0.77
DDX56-208ENST00000467318 HOXC9P31274 260 aa19.84■□□□□ 0.77
DDX56-208ENST00000467318 ABCC6O95255 1503 aa19.84■□□□□ 0.77
DDX56-208ENST00000467318 CHRNA2Q15822 529 aa19.84■□□□□ 0.77
DDX56-208ENST00000467318 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
DDX56-208ENST00000467318 CFAP53Q96M91 514 aa19.83■□□□□ 0.76
DDX56-208ENST00000467318 CDK12Q9NYV4 1490 aaPredicted RBP19.83■□□□□ 0.76
DDX56-208ENST00000467318 INSRP06213 1382 aa19.82■□□□□ 0.76
DDX56-208ENST00000467318 BLMP54132 1417 aaPredicted RBP19.82■□□□□ 0.76
DDX56-208ENST00000467318 MEX3CQ5U5Q3 659 aaKnown RBP19.81■□□□□ 0.76
DDX56-208ENST00000467318 HSP90AB2PQ58FF8 381 aa19.81■□□□□ 0.76
DDX56-208ENST00000467318 AXIN2Q9Y2T1 843 aa19.81■□□□□ 0.76
DDX56-208ENST00000467318 COL14A1Q05707 1796 aaKnown RBP19.8■□□□□ 0.76
DDX56-208ENST00000467318 NGLY1Q96IV0 654 aa19.8■□□□□ 0.76
DDX56-208ENST00000467318 COL18A1P39060 1754 aa19.79■□□□□ 0.76
DDX56-208ENST00000467318 C8orf37Q96NL8 207 aa19.79■□□□□ 0.76
DDX56-208ENST00000467318 PEAK1Q9H792 1746 aa19.79■□□□□ 0.76
DDX56-208ENST00000467318 FNBP4Q8N3X1 1017 aaPredicted RBP19.78■□□□□ 0.76
DDX56-208ENST00000467318 BTG4Q9NY30 223 aa19.78■□□□□ 0.76
DDX56-208ENST00000467318 LMO7Q8WWI1 1683 aa19.78■□□□□ 0.76
DDX56-208ENST00000467318 CCER2I3L3R5 266 aa19.77■□□□□ 0.76
DDX56-208ENST00000467318 CAMTA1Q9Y6Y1 1673 aa19.76■□□□□ 0.75
DDX56-208ENST00000467318 ERBB3P21860 1342 aa19.76■□□□□ 0.75
DDX56-208ENST00000467318 DIAPH1O60610 1272 aaKnown RBP19.76■□□□□ 0.75
DDX56-208ENST00000467318 SLIT2O94813 1529 aa19.76■□□□□ 0.75
DDX56-208ENST00000467318 EVA1CP58658 441 aa19.75■□□□□ 0.75
DDX56-208ENST00000467318 EIF4A2Q14240 407 aaKnown RBP19.75■□□□□ 0.75
DDX56-208ENST00000467318 ANKRD24Q8TF21 1146 aa19.75■□□□□ 0.75
DDX56-208ENST00000467318 NUDCQ9Y266 331 aa19.75■□□□□ 0.75
DDX56-208ENST00000467318 COL5A2P05997 1499 aaPredicted RBP19.74■□□□□ 0.75
DDX56-208ENST00000467318 RGPD5Q99666 1765 aa19.74■□□□□ 0.75
DDX56-208ENST00000467318 MRS2Q9HD23 443 aa19.74■□□□□ 0.75
DDX56-208ENST00000467318 NWD2Q9ULI1 1742 aa19.74■□□□□ 0.75
DDX56-208ENST00000467318 IL13P35225 146 aa19.73■□□□□ 0.75
DDX56-208ENST00000467318 UNC5CLQ8IV45 518 aa19.73■□□□□ 0.75
DDX56-208ENST00000467318 COL3A1P02461 1466 aaPredicted RBP19.73■□□□□ 0.75
DDX56-208ENST00000467318 WDR17Q8IZU2 1322 aa19.73■□□□□ 0.75
DDX56-208ENST00000467318 PLCH1Q4KWH8 1693 aa19.72■□□□□ 0.75
DDX56-208ENST00000467318 CSB-PGBD3P0DP91 1061 aa19.72■□□□□ 0.75
DDX56-208ENST00000467318 LTV1Q96GA3 475 aaPredicted RBP19.72■□□□□ 0.75
DDX56-208ENST00000467318 STRN4Q9NRL3 753 aa19.71■□□□□ 0.75
DDX56-208ENST00000467318 USP21Q9UK80 565 aa19.71■□□□□ 0.75
DDX56-208ENST00000467318 CCDC184Q52MB2 194 aa19.71■□□□□ 0.75
DDX56-208ENST00000467318 BCL9LQ86UU0 1499 aa19.71■□□□□ 0.75
DDX56-208ENST00000467318 AFF2P51816 1311 aa19.7■□□□□ 0.74
DDX56-208ENST00000467318 TOM1L2Q6ZVM7 507 aa19.69■□□□□ 0.74
DDX56-208ENST00000467318 LARP1Q6PKG0 1096 aaKnown RBP19.68■□□□□ 0.74
DDX56-208ENST00000467318 EYA1Q99502 592 aa19.68■□□□□ 0.74
DDX56-208ENST00000467318 NLRP2Q9NX02 1062 aa19.68■□□□□ 0.74
DDX56-208ENST00000467318 CRB1P82279 1406 aa19.68■□□□□ 0.74
DDX56-208ENST00000467318 FAM208AQ9UK61 1670 aaKnown RBP19.67■□□□□ 0.74
DDX56-208ENST00000467318 U2SURPO15042 1029 aaKnown RBP19.67■□□□□ 0.74
DDX56-208ENST00000467318 NBPF6Q5VWK0 638 aa19.67■□□□□ 0.74
DDX56-208ENST00000467318 NRAPQ86VF7 1730 aa19.67■□□□□ 0.74
DDX56-208ENST00000467318 NBPF4Q96M43 638 aa19.67■□□□□ 0.74
DDX56-208ENST00000467318 CARD10Q9BWT7 1032 aa19.67■□□□□ 0.74
DDX56-208ENST00000467318 IGSF1Q8N6C5 1336 aa19.67■□□□□ 0.74
DDX56-208ENST00000467318 WDR43Q15061 677 aaKnown RBP eCLIP19.66■□□□□ 0.74
DDX56-208ENST00000467318 VPS72Q15906 364 aa19.66■□□□□ 0.74
DDX56-208ENST00000467318 ZNF772Q68DY9 489 aaPredicted RBP19.66■□□□□ 0.74
DDX56-208ENST00000467318 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
DDX56-208ENST00000467318 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.66■□□□□ 0.74
DDX56-208ENST00000467318 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
DDX56-208ENST00000467318 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.74
DDX56-208ENST00000467318 TRPC5Q9UL62 973 aaPredicted RBP19.65■□□□□ 0.74
DDX56-208ENST00000467318 RGS17Q9UGC6 210 aaPredicted RBP19.64■□□□□ 0.73
DDX56-208ENST00000467318 THRAP3Q9Y2W1 955 aaKnown RBP19.63■□□□□ 0.73
DDX56-208ENST00000467318 CCDC9Q9Y3X0 531 aaKnown RBP19.63■□□□□ 0.73
DDX56-208ENST00000467318 SPATA31A5Q5VU36 1347 aa19.63■□□□□ 0.73
DDX56-208ENST00000467318 SPATA31A7Q8IWB4 1347 aa19.63■□□□□ 0.73
DDX56-208ENST00000467318 RGPD2P0DJD1 1756 aa19.63■□□□□ 0.73
DDX56-208ENST00000467318 NCAPD2Q15021 1401 aa19.63■□□□□ 0.73
DDX56-208ENST00000467318 RGPD1P0DJD0 1748 aa19.62■□□□□ 0.73
DDX56-208ENST00000467318 FCHSD2O94868 740 aa19.62■□□□□ 0.73
DDX56-208ENST00000467318 SULT6B1Q6IMI4 303 aa19.62■□□□□ 0.73
DDX56-208ENST00000467318 SPATA31A1Q5TZJ5 1347 aa19.62■□□□□ 0.73
DDX56-208ENST00000467318 KDRP35968 1356 aa19.62■□□□□ 0.73
DDX56-208ENST00000467318 TCP11L2Q8N4U5 519 aa19.62■□□□□ 0.73
DDX56-208ENST00000467318 PNNQ9H307 717 aaKnown RBP19.62■□□□□ 0.73
DDX56-208ENST00000467318 QTRT2Q9H974 415 aaKnown RBP19.62■□□□□ 0.73
DDX56-208ENST00000467318 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
DDX56-208ENST00000467318 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
DDX56-208ENST00000467318 ADAMTS8Q9UP79 889 aa19.61■□□□□ 0.73
DDX56-208ENST00000467318 ATRNO75882 1429 aa19.6■□□□□ 0.73
DDX56-208ENST00000467318 USHBP1Q8N6Y0 703 aa19.6■□□□□ 0.73
DDX56-208ENST00000467318 GJD4Q96KN9 370 aaPredicted RBP19.6■□□□□ 0.73
DDX56-208ENST00000467318 HMOX1P09601 288 aa19.59■□□□□ 0.73
DDX56-208ENST00000467318 RAPGEF4Q8WZA2 1011 aa19.59■□□□□ 0.73
DDX56-208ENST00000467318 BARGINQ6ZT62 677 aa19.58■□□□□ 0.72
DDX56-208ENST00000467318 AEBP1Q8IUX7 1158 aa19.58■□□□□ 0.72
DDX56-208ENST00000467318 FAM9BQ8IZU0 186 aa19.58■□□□□ 0.72
DDX56-208ENST00000467318 CDCA7Q9BWT1 371 aaPredicted RBP19.58■□□□□ 0.72
DDX56-208ENST00000467318 RSPH6AQ9H0K4 717 aa19.58■□□□□ 0.72
DDX56-208ENST00000467318 PLEKHG2Q9H7P9 1386 aa19.57■□□□□ 0.72
DDX56-208ENST00000467318 NEFMP07197 916 aa19.56■□□□□ 0.72
DDX56-208ENST00000467318 IL2RBP14784 551 aa19.56■□□□□ 0.72
DDX56-208ENST00000467318 POTEAQ6S8J7 498 aa19.56■□□□□ 0.72
DDX56-208ENST00000467318 TATP17735 454 aaPredicted RBP19.55■□□□□ 0.72
DDX56-208ENST00000467318 PRKAR2BP31323 418 aa19.55■□□□□ 0.72
DDX56-208ENST00000467318 RBM6P78332 1123 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms