RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 MORC1Q86VD1 984 aa13.45□□□□□ -0.26
PMF1-204ENST00000466489 MAP2P11137 1827 aaKnown RBP13.45□□□□□ -0.26
PMF1-204ENST00000466489 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
PMF1-204ENST00000466489 LMO7Q8WWI1 1683 aa13.44□□□□□ -0.26
PMF1-204ENST00000466489 AMPHP49418 695 aa13.44□□□□□ -0.26
PMF1-204ENST00000466489 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
PMF1-204ENST00000466489 ARHGEF25Q86VW2 580 aa13.44□□□□□ -0.26
PMF1-204ENST00000466489 CCDC9Q9Y3X0 531 aaKnown RBP13.44□□□□□ -0.26
PMF1-204ENST00000466489 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
PMF1-204ENST00000466489 NPC1L1Q9UHC9 1359 aa13.44□□□□□ -0.26
PMF1-204ENST00000466489 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
PMF1-204ENST00000466489 KIF24Q5T7B8 1368 aa13.43□□□□□ -0.26
PMF1-204ENST00000466489 BCL9LQ86UU0 1499 aa13.42□□□□□ -0.26
PMF1-204ENST00000466489 BLMP54132 1417 aaPredicted RBP13.42□□□□□ -0.26
PMF1-204ENST00000466489 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
PMF1-204ENST00000466489 QTRT2Q9H974 415 aaKnown RBP13.42□□□□□ -0.26
PMF1-204ENST00000466489 STRN4Q9NRL3 753 aa13.42□□□□□ -0.26
PMF1-204ENST00000466489 FAM208AQ9UK61 1670 aaKnown RBP13.42□□□□□ -0.26
PMF1-204ENST00000466489 COL18A1P39060 1754 aa13.42□□□□□ -0.26
PMF1-204ENST00000466489 PER1O15534 1290 aaPredicted RBP13.41□□□□□ -0.26
PMF1-204ENST00000466489 CSB-PGBD3P0DP91 1061 aa13.41□□□□□ -0.26
PMF1-204ENST00000466489 RBM6P78332 1123 aaKnown RBP13.41□□□□□ -0.26
PMF1-204ENST00000466489 VPS72Q15906 364 aa13.41□□□□□ -0.26
PMF1-204ENST00000466489 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
PMF1-204ENST00000466489 COL5A2P05997 1499 aaPredicted RBP13.41□□□□□ -0.26
PMF1-204ENST00000466489 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
PMF1-204ENST00000466489 ATRNO75882 1429 aa13.4□□□□□ -0.26
PMF1-204ENST00000466489 RXRBP28702 533 aa13.4□□□□□ -0.26
PMF1-204ENST00000466489 TNNT2P45379 298 aaPredicted RBP13.4□□□□□ -0.26
PMF1-204ENST00000466489 CC2D1BQ5T0F9 858 aaKnown RBP13.4□□□□□ -0.26
PMF1-204ENST00000466489 FLT4P35916 1363 aa13.4□□□□□ -0.26
PMF1-204ENST00000466489 MAP3K19Q56UN5 1328 aa13.39□□□□□ -0.27
PMF1-204ENST00000466489 PPM1GO15355 546 aaPredicted RBP13.39□□□□□ -0.27
PMF1-204ENST00000466489 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
PMF1-204ENST00000466489 IP6K1Q92551 441 aa13.39□□□□□ -0.27
PMF1-204ENST00000466489 TOM1L2Q6ZVM7 507 aa13.38□□□□□ -0.27
PMF1-204ENST00000466489 GJD4Q96KN9 370 aaPredicted RBP13.38□□□□□ -0.27
PMF1-204ENST00000466489 RGS17Q9UGC6 210 aaPredicted RBP13.38□□□□□ -0.27
PMF1-204ENST00000466489 CRB1P82279 1406 aa13.38□□□□□ -0.27
PMF1-204ENST00000466489 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
PMF1-204ENST00000466489 HOXC9P31274 260 aa13.37□□□□□ -0.27
PMF1-204ENST00000466489 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
PMF1-204ENST00000466489 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
PMF1-204ENST00000466489 A0A0G2JS52 829 aa13.36□□□□□ -0.27
PMF1-204ENST00000466489 POTEAQ6S8J7 498 aa13.36□□□□□ -0.27
PMF1-204ENST00000466489 ERBB3P21860 1342 aa13.36□□□□□ -0.27
PMF1-204ENST00000466489 SPATA31A5Q5VU36 1347 aa13.36□□□□□ -0.27
PMF1-204ENST00000466489 SPATA31A7Q8IWB4 1347 aa13.36□□□□□ -0.27
PMF1-204ENST00000466489 INSRP06213 1382 aa13.35□□□□□ -0.27
PMF1-204ENST00000466489 ANKRD24Q8TF21 1146 aa13.35□□□□□ -0.27
PMF1-204ENST00000466489 THRAP3Q9Y2W1 955 aaKnown RBP13.35□□□□□ -0.27
PMF1-204ENST00000466489 EMILIN1Q9Y6C2 1016 aa13.35□□□□□ -0.27
PMF1-204ENST00000466489 PEAK1Q9H792 1746 aa13.34□□□□□ -0.27
PMF1-204ENST00000466489 GLI3P10071 1580 aa13.34□□□□□ -0.27
PMF1-204ENST00000466489 FBLN1P23142 703 aa13.34□□□□□ -0.27
PMF1-204ENST00000466489 LARP1Q6PKG0 1096 aaKnown RBP13.34□□□□□ -0.27
PMF1-204ENST00000466489 TCP11L2Q8N4U5 519 aa13.34□□□□□ -0.27
PMF1-204ENST00000466489 LTV1Q96GA3 475 aaPredicted RBP13.34□□□□□ -0.27
PMF1-204ENST00000466489 NLRP2Q9NX02 1062 aa13.34□□□□□ -0.27
PMF1-204ENST00000466489 USP35Q9P2H5 1018 aa13.34□□□□□ -0.27
PMF1-204ENST00000466489 AXIN2Q9Y2T1 843 aa13.34□□□□□ -0.27
PMF1-204ENST00000466489 SPATA31A1Q5TZJ5 1347 aa13.34□□□□□ -0.27
PMF1-204ENST00000466489 CFAP53Q96M91 514 aa13.33□□□□□ -0.28
PMF1-204ENST00000466489 CDCA7Q9BWT1 371 aaPredicted RBP13.33□□□□□ -0.28
PMF1-204ENST00000466489 CARD10Q9BWT7 1032 aa13.33□□□□□ -0.28
PMF1-204ENST00000466489 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
PMF1-204ENST00000466489 WNK3Q9BYP7 1800 aa13.33□□□□□ -0.28
PMF1-204ENST00000466489 RALBP1Q15311 655 aa13.32□□□□□ -0.28
PMF1-204ENST00000466489 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
PMF1-204ENST00000466489 HSP90AB2PQ58FF8 381 aa13.31□□□□□ -0.28
PMF1-204ENST00000466489 BARGINQ6ZT62 677 aa13.31□□□□□ -0.28
PMF1-204ENST00000466489 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
PMF1-204ENST00000466489 MTHFSP49914 203 aa13.3□□□□□ -0.28
PMF1-204ENST00000466489 PARD3Q8TEW0 1356 aa13.3□□□□□ -0.28
PMF1-204ENST00000466489 PARP4Q9UKK3 1724 aaKnown RBP13.29□□□□□ -0.28
PMF1-204ENST00000466489 RGS12O14924 1447 aa13.29□□□□□ -0.28
PMF1-204ENST00000466489 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
PMF1-204ENST00000466489 SEPT12Q8IYM1 358 aa13.28□□□□□ -0.28
PMF1-204ENST00000466489 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.28
PMF1-204ENST00000466489 ONECUT3O60422 494 aaPredicted RBP13.27□□□□□ -0.29
PMF1-204ENST00000466489 IL2RBP14784 551 aa13.27□□□□□ -0.29
PMF1-204ENST00000466489 PPP2R1AP30153 589 aa13.27□□□□□ -0.29
PMF1-204ENST00000466489 PDE3BQ13370 1112 aa13.27□□□□□ -0.29
PMF1-204ENST00000466489 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
PMF1-204ENST00000466489 DIAPH1O60610 1272 aaKnown RBP13.26□□□□□ -0.29
PMF1-204ENST00000466489 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
PMF1-204ENST00000466489 FKBP8Q14318 412 aa13.26□□□□□ -0.29
PMF1-204ENST00000466489 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
PMF1-204ENST00000466489 MYBBP1AQ9BQG0 1328 aaKnown RBP13.25□□□□□ -0.29
PMF1-204ENST00000466489 DDB1Q16531 1140 aa13.25□□□□□ -0.29
PMF1-204ENST00000466489 LRRC37A3O60309 1634 aa13.24□□□□□ -0.29
PMF1-204ENST00000466489 EXOC5O00471 708 aa13.24□□□□□ -0.29
PMF1-204ENST00000466489 TATP17735 454 aaPredicted RBP13.24□□□□□ -0.29
PMF1-204ENST00000466489 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
PMF1-204ENST00000466489 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
PMF1-204ENST00000466489 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
PMF1-204ENST00000466489 PRKRIP1Q9H875 184 aaPredicted RBP13.23□□□□□ -0.29
PMF1-204ENST00000466489 DISP2A7MBM2 1401 aa13.22□□□□□ -0.29
PMF1-204ENST00000466489 TNS2Q63HR2 1409 aa13.22□□□□□ -0.29
PMF1-204ENST00000466489 KAT6BQ8WYB5 2073 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms