RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 CHRNA2Q15822 529 aa18.74■□□□□ 0.59
PHACTR4-203ENST00000463428 CCDC184Q52MB2 194 aa18.74■□□□□ 0.59
PHACTR4-203ENST00000463428 PRDM11Q9NQV5 511 aa18.74■□□□□ 0.59
PHACTR4-203ENST00000463428 AXIN2Q9Y2T1 843 aa18.74■□□□□ 0.59
PHACTR4-203ENST00000463428 FLT4P35916 1363 aa18.74■□□□□ 0.59
PHACTR4-203ENST00000463428 AMPHP49418 695 aa18.74■□□□□ 0.59
PHACTR4-203ENST00000463428 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
PHACTR4-203ENST00000463428 CAMTA1Q9Y6Y1 1673 aa18.73■□□□□ 0.59
PHACTR4-203ENST00000463428 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
PHACTR4-203ENST00000463428 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
PHACTR4-203ENST00000463428 HSP90AB2PQ58FF8 381 aa18.73■□□□□ 0.59
PHACTR4-203ENST00000463428 ILDR1Q86SU0 546 aaPredicted RBP18.73■□□□□ 0.59
PHACTR4-203ENST00000463428 COL3A1P02461 1466 aaPredicted RBP18.72■□□□□ 0.59
PHACTR4-203ENST00000463428 BLMP54132 1417 aaPredicted RBP18.71■□□□□ 0.59
PHACTR4-203ENST00000463428 PLCH1Q4KWH8 1693 aa18.7■□□□□ 0.58
PHACTR4-203ENST00000463428 CCER2I3L3R5 266 aa18.69■□□□□ 0.58
PHACTR4-203ENST00000463428 SLIT2O94813 1529 aa18.69■□□□□ 0.58
PHACTR4-203ENST00000463428 NWD2Q9ULI1 1742 aa18.68■□□□□ 0.58
PHACTR4-203ENST00000463428 IL13P35225 146 aa18.67■□□□□ 0.58
PHACTR4-203ENST00000463428 EIF4A2Q14240 407 aaKnown RBP18.67■□□□□ 0.58
PHACTR4-203ENST00000463428 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
PHACTR4-203ENST00000463428 FNBP4Q8N3X1 1017 aaPredicted RBP18.66■□□□□ 0.58
PHACTR4-203ENST00000463428 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
PHACTR4-203ENST00000463428 COL5A2P05997 1499 aaPredicted RBP18.66■□□□□ 0.58
PHACTR4-203ENST00000463428 ERBB3P21860 1342 aa18.66■□□□□ 0.58
PHACTR4-203ENST00000463428 NRAPQ86VF7 1730 aa18.66■□□□□ 0.58
PHACTR4-203ENST00000463428 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
PHACTR4-203ENST00000463428 ANKRD24Q8TF21 1146 aa18.66■□□□□ 0.58
PHACTR4-203ENST00000463428 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
PHACTR4-203ENST00000463428 RGPD2P0DJD1 1756 aa18.65■□□□□ 0.58
PHACTR4-203ENST00000463428 NGLY1Q96IV0 654 aa18.65■□□□□ 0.58
PHACTR4-203ENST00000463428 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
PHACTR4-203ENST00000463428 BCL9LQ86UU0 1499 aa18.64■□□□□ 0.57
PHACTR4-203ENST00000463428 LTV1Q96GA3 475 aaPredicted RBP18.64■□□□□ 0.57
PHACTR4-203ENST00000463428 RGPD1P0DJD0 1748 aa18.64■□□□□ 0.57
PHACTR4-203ENST00000463428 MEX3CQ5U5Q3 659 aaKnown RBP18.63■□□□□ 0.57
PHACTR4-203ENST00000463428 PNISRQ8TF01 805 aaKnown RBP18.62■□□□□ 0.57
PHACTR4-203ENST00000463428 WDR17Q8IZU2 1322 aa18.61■□□□□ 0.57
PHACTR4-203ENST00000463428 FAM208AQ9UK61 1670 aaKnown RBP18.61■□□□□ 0.57
PHACTR4-203ENST00000463428 EYA1Q99502 592 aa18.61■□□□□ 0.57
PHACTR4-203ENST00000463428 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.61■□□□□ 0.57
PHACTR4-203ENST00000463428 NBPF6Q5VWK0 638 aa18.6■□□□□ 0.57
PHACTR4-203ENST00000463428 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
PHACTR4-203ENST00000463428 UNC5CLQ8IV45 518 aa18.6■□□□□ 0.57
PHACTR4-203ENST00000463428 NBPF4Q96M43 638 aa18.6■□□□□ 0.57
PHACTR4-203ENST00000463428 STRN4Q9NRL3 753 aa18.6■□□□□ 0.57
PHACTR4-203ENST00000463428 AFF2P51816 1311 aa18.6■□□□□ 0.57
PHACTR4-203ENST00000463428 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
PHACTR4-203ENST00000463428 NCAPD2Q15021 1401 aa18.6■□□□□ 0.57
PHACTR4-203ENST00000463428 EVA1CP58658 441 aa18.59■□□□□ 0.57
PHACTR4-203ENST00000463428 USP21Q9UK80 565 aa18.58■□□□□ 0.57
PHACTR4-203ENST00000463428 NUDCQ9Y266 331 aa18.58■□□□□ 0.57
PHACTR4-203ENST00000463428 CSB-PGBD3P0DP91 1061 aa18.57■□□□□ 0.56
PHACTR4-203ENST00000463428 CRB1P82279 1406 aa18.57■□□□□ 0.56
PHACTR4-203ENST00000463428 CARD10Q9BWT7 1032 aa18.57■□□□□ 0.56
PHACTR4-203ENST00000463428 U2SURPO15042 1029 aaKnown RBP18.56■□□□□ 0.56
PHACTR4-203ENST00000463428 VPS72Q15906 364 aa18.56■□□□□ 0.56
PHACTR4-203ENST00000463428 TOM1L2Q6ZVM7 507 aa18.56■□□□□ 0.56
PHACTR4-203ENST00000463428 NLRP2Q9NX02 1062 aa18.56■□□□□ 0.56
PHACTR4-203ENST00000463428 KDRP35968 1356 aa18.55■□□□□ 0.56
PHACTR4-203ENST00000463428 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
PHACTR4-203ENST00000463428 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.56
PHACTR4-203ENST00000463428 USHBP1Q8N6Y0 703 aa18.55■□□□□ 0.56
PHACTR4-203ENST00000463428 ADAMTS8Q9UP79 889 aa18.55■□□□□ 0.56
PHACTR4-203ENST00000463428 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
PHACTR4-203ENST00000463428 AEBP1Q8IUX7 1158 aa18.54■□□□□ 0.56
PHACTR4-203ENST00000463428 SPATA31A5Q5VU36 1347 aa18.54■□□□□ 0.56
PHACTR4-203ENST00000463428 SPATA31A7Q8IWB4 1347 aa18.54■□□□□ 0.56
PHACTR4-203ENST00000463428 ATRNO75882 1429 aa18.53■□□□□ 0.56
PHACTR4-203ENST00000463428 HMOX1P09601 288 aa18.53■□□□□ 0.56
PHACTR4-203ENST00000463428 WDR43Q15061 677 aaKnown RBP eCLIP18.53■□□□□ 0.56
PHACTR4-203ENST00000463428 SPATA31A1Q5TZJ5 1347 aa18.53■□□□□ 0.56
PHACTR4-203ENST00000463428 FCHSD2O94868 740 aa18.52■□□□□ 0.56
PHACTR4-203ENST00000463428 RSPH6AQ9H0K4 717 aa18.52■□□□□ 0.56
PHACTR4-203ENST00000463428 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.56
PHACTR4-203ENST00000463428 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
PHACTR4-203ENST00000463428 PLEKHF1Q96S99 279 aa18.5■□□□□ 0.55
PHACTR4-203ENST00000463428 TRPC5Q9UL62 973 aaPredicted RBP18.5■□□□□ 0.55
PHACTR4-203ENST00000463428 ZNF772Q68DY9 489 aaPredicted RBP18.49■□□□□ 0.55
PHACTR4-203ENST00000463428 QTRT2Q9H974 415 aaKnown RBP18.49■□□□□ 0.55
PHACTR4-203ENST00000463428 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
PHACTR4-203ENST00000463428 GLI3P10071 1580 aa18.49■□□□□ 0.55
PHACTR4-203ENST00000463428 TCP11L2Q8N4U5 519 aa18.49■□□□□ 0.55
PHACTR4-203ENST00000463428 GJD4Q96KN9 370 aaPredicted RBP18.49■□□□□ 0.55
PHACTR4-203ENST00000463428 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
PHACTR4-203ENST00000463428 DISP2A7MBM2 1401 aa18.48■□□□□ 0.55
PHACTR4-203ENST00000463428 WNK3Q9BYP7 1800 aa18.48■□□□□ 0.55
PHACTR4-203ENST00000463428 BARGINQ6ZT62 677 aa18.48■□□□□ 0.55
PHACTR4-203ENST00000463428 MEGF6O75095 1541 aa18.47■□□□□ 0.55
PHACTR4-203ENST00000463428 PRKAR2BP31323 418 aa18.47■□□□□ 0.55
PHACTR4-203ENST00000463428 CCDC9Q9Y3X0 531 aaKnown RBP18.47■□□□□ 0.55
PHACTR4-203ENST00000463428 PHACTR3Q96KR7 559 aa18.46■□□□□ 0.55
PHACTR4-203ENST00000463428 IL2RBP14784 551 aa18.45■□□□□ 0.54
PHACTR4-203ENST00000463428 PLEKHG2Q9H7P9 1386 aa18.44■□□□□ 0.54
PHACTR4-203ENST00000463428 ONECUT3O60422 494 aaPredicted RBP18.44■□□□□ 0.54
PHACTR4-203ENST00000463428 TATP17735 454 aaPredicted RBP18.44■□□□□ 0.54
PHACTR4-203ENST00000463428 CCDC146Q8IYE0 955 aa18.44■□□□□ 0.54
PHACTR4-203ENST00000463428 RAPGEF4Q8WZA2 1011 aa18.44■□□□□ 0.54
PHACTR4-203ENST00000463428 RUNDC1Q96C34 613 aa18.44■□□□□ 0.54
PHACTR4-203ENST00000463428 PNNQ9H307 717 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms