RNA–Protein interactions for RNA: ENST00000462415.2

LAMA5-204, Transcript of laminin subunit alpha 5, humanhuman

TSL 2

Gene LAMA5, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-204ENST00000462415 STRN4Q9NRL3 753 aa23.55■■□□□ 1.36
LAMA5-204ENST00000462415 CCDC9Q9Y3X0 531 aaKnown RBP23.55■■□□□ 1.36
LAMA5-204ENST00000462415 VPS72Q15906 364 aa23.54■■□□□ 1.36
LAMA5-204ENST00000462415 WNK3Q9BYP7 1800 aa23.53■■□□□ 1.36
LAMA5-204ENST00000462415 PEAK1Q9H792 1746 aa23.53■■□□□ 1.36
LAMA5-204ENST00000462415 GJD4Q96KN9 370 aaPredicted RBP23.51■■□□□ 1.35
LAMA5-204ENST00000462415 NSD2O96028 1365 aa23.51■■□□□ 1.35
LAMA5-204ENST00000462415 FAM208AQ9UK61 1670 aaKnown RBP23.5■■□□□ 1.35
LAMA5-204ENST00000462415 THSD7AQ9UPZ6 1657 aa23.49■■□□□ 1.35
LAMA5-204ENST00000462415 BRWD3Q6RI45 1802 aa23.49■■□□□ 1.35
LAMA5-204ENST00000462415 MAP2P11137 1827 aaKnown RBP23.48■■□□□ 1.35
LAMA5-204ENST00000462415 FBLN1P23142 703 aa23.48■■□□□ 1.35
LAMA5-204ENST00000462415 EVA1CP58658 441 aa23.48■■□□□ 1.35
LAMA5-204ENST00000462415 AXIN2Q9Y2T1 843 aa23.48■■□□□ 1.35
LAMA5-204ENST00000462415 KNSTRNQ9Y448 316 aa23.48■■□□□ 1.35
LAMA5-204ENST00000462415 MAP3K19Q56UN5 1328 aa23.48■■□□□ 1.35
LAMA5-204ENST00000462415 SPATA31A5Q5VU36 1347 aa23.48■■□□□ 1.35
LAMA5-204ENST00000462415 SPATA31A7Q8IWB4 1347 aa23.48■■□□□ 1.35
LAMA5-204ENST00000462415 LARP1Q6PKG0 1096 aaKnown RBP23.47■■□□□ 1.35
LAMA5-204ENST00000462415 RTL1A6NKG5 1358 aa23.47■■□□□ 1.35
LAMA5-204ENST00000462415 BLMP54132 1417 aaPredicted RBP23.46■■□□□ 1.35
LAMA5-204ENST00000462415 CRB1P82279 1406 aa23.46■■□□□ 1.35
LAMA5-204ENST00000462415 RRS1Q15050 365 aaKnown RBP23.46■■□□□ 1.35
LAMA5-204ENST00000462415 SPATA31A1Q5TZJ5 1347 aa23.44■■□□□ 1.34
LAMA5-204ENST00000462415 RGPD2P0DJD1 1756 aa23.44■■□□□ 1.34
LAMA5-204ENST00000462415 WDR17Q8IZU2 1322 aa23.43■■□□□ 1.34
LAMA5-204ENST00000462415 USP35Q9P2H5 1018 aa23.43■■□□□ 1.34
LAMA5-204ENST00000462415 ERBB3P21860 1342 aa23.42■■□□□ 1.34
LAMA5-204ENST00000462415 CSB-PGBD3P0DP91 1061 aa23.42■■□□□ 1.34
LAMA5-204ENST00000462415 TNNT2P45379 298 aaPredicted RBP23.42■■□□□ 1.34
LAMA5-204ENST00000462415 AMPHP49418 695 aa23.42■■□□□ 1.34
LAMA5-204ENST00000462415 AMER1Q5JTC6 1135 aaPredicted RBP23.42■■□□□ 1.34
LAMA5-204ENST00000462415 A0A0G2JS52 829 aa23.41■■□□□ 1.34
LAMA5-204ENST00000462415 MYT1Q01538 1121 aa23.41■■□□□ 1.34
LAMA5-204ENST00000462415 FAM98CQ17RN3 349 aaKnown RBP23.41■■□□□ 1.34
LAMA5-204ENST00000462415 PARP4Q9UKK3 1724 aaKnown RBP23.41■■□□□ 1.34
LAMA5-204ENST00000462415 LRRC37A3O60309 1634 aa23.41■■□□□ 1.34
LAMA5-204ENST00000462415 HOXC9P31274 260 aa23.4■■□□□ 1.34
LAMA5-204ENST00000462415 TOM1L2Q6ZVM7 507 aa23.4■■□□□ 1.34
LAMA5-204ENST00000462415 IP6K1Q92551 441 aa23.4■■□□□ 1.34
LAMA5-204ENST00000462415 FLT4P35916 1363 aa23.4■■□□□ 1.34
LAMA5-204ENST00000462415 PER1O15534 1290 aaPredicted RBP23.39■■□□□ 1.33
LAMA5-204ENST00000462415 EMILIN1Q9Y6C2 1016 aa23.39■■□□□ 1.33
LAMA5-204ENST00000462415 ANKRD24Q8TF21 1146 aa23.38■■□□□ 1.33
LAMA5-204ENST00000462415 SMG6Q86US8 1419 aaKnown RBP23.37■■□□□ 1.33
LAMA5-204ENST00000462415 CC2D1BQ5T0F9 858 aaKnown RBP23.37■■□□□ 1.33
LAMA5-204ENST00000462415 MORC1Q86VD1 984 aa23.37■■□□□ 1.33
LAMA5-204ENST00000462415 SEPT12Q8IYM1 358 aa23.37■■□□□ 1.33
LAMA5-204ENST00000462415 LTV1Q96GA3 475 aaPredicted RBP23.37■■□□□ 1.33
LAMA5-204ENST00000462415 KIF24Q5T7B8 1368 aa23.37■■□□□ 1.33
LAMA5-204ENST00000462415 CNGB1Q14028 1251 aaPredicted RBP23.36■■□□□ 1.33
LAMA5-204ENST00000462415 TCP11L2Q8N4U5 519 aa23.36■■□□□ 1.33
LAMA5-204ENST00000462415 PPM1GO15355 546 aaPredicted RBP23.35■■□□□ 1.33
LAMA5-204ENST00000462415 NPC1L1Q9UHC9 1359 aa23.35■■□□□ 1.33
LAMA5-204ENST00000462415 NLRP2Q9NX02 1062 aa23.34■■□□□ 1.33
LAMA5-204ENST00000462415 INSRP06213 1382 aa23.34■■□□□ 1.33
LAMA5-204ENST00000462415 ONECUT3O60422 494 aaPredicted RBP23.32■■□□□ 1.32
LAMA5-204ENST00000462415 BARGINQ6ZT62 677 aa23.32■■□□□ 1.32
LAMA5-204ENST00000462415 CARD10Q9BWT7 1032 aa23.32■■□□□ 1.32
LAMA5-204ENST00000462415 POLKQ9UBT6 870 aa23.32■■□□□ 1.32
LAMA5-204ENST00000462415 HSP90AB2PQ58FF8 381 aa23.31■■□□□ 1.32
LAMA5-204ENST00000462415 THRAP3Q9Y2W1 955 aaKnown RBP23.31■■□□□ 1.32
LAMA5-204ENST00000462415 DISP2A7MBM2 1401 aa23.31■■□□□ 1.32
LAMA5-204ENST00000462415 SOCS7O14512 581 aa23.3■■□□□ 1.32
LAMA5-204ENST00000462415 DDX10Q13206 875 aaKnown RBP23.26■■□□□ 1.31
LAMA5-204ENST00000462415 KRT27Q7Z3Y8 459 aa23.26■■□□□ 1.31
LAMA5-204ENST00000462415 TNS2Q63HR2 1409 aa23.25■■□□□ 1.31
LAMA5-204ENST00000462415 EP400Q96L91 3159 aa23.25■■□□□ 1.31
LAMA5-204ENST00000462415 SHANK3Q9BYB0 1731 aa23.24■■□□□ 1.31
LAMA5-204ENST00000462415 MEGF6O75095 1541 aa23.23■■□□□ 1.31
LAMA5-204ENST00000462415 USHBP1Q8N6Y0 703 aa23.23■■□□□ 1.31
LAMA5-204ENST00000462415 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
LAMA5-204ENST00000462415 NBPF6Q5VWK0 638 aa23.21■■□□□ 1.31
LAMA5-204ENST00000462415 NBPF4Q96M43 638 aa23.21■■□□□ 1.31
LAMA5-204ENST00000462415 CDCA7Q9BWT1 371 aaPredicted RBP23.21■■□□□ 1.31
LAMA5-204ENST00000462415 NCAPD2Q15021 1401 aa23.21■■□□□ 1.31
LAMA5-204ENST00000462415 IL2RBP14784 551 aa23.2■■□□□ 1.3
LAMA5-204ENST00000462415 DDB1Q16531 1140 aa23.2■■□□□ 1.3
LAMA5-204ENST00000462415 FAM182BQ5T319 152 aa23.2■■□□□ 1.3
LAMA5-204ENST00000462415 TNS1Q9HBL0 1735 aaKnown RBP23.19■■□□□ 1.3
LAMA5-204ENST00000462415 COL3A1P02461 1466 aaPredicted RBP23.19■■□□□ 1.3
LAMA5-204ENST00000462415 EIF4A2Q14240 407 aaKnown RBP23.19■■□□□ 1.3
LAMA5-204ENST00000462415 PKD1L3Q7Z443 1732 aa23.19■■□□□ 1.3
LAMA5-204ENST00000462415 ZNF316A6NFI3 1004 aaPredicted RBP23.18■■□□□ 1.3
LAMA5-204ENST00000462415 MTHFSP49914 203 aa23.18■■□□□ 1.3
LAMA5-204ENST00000462415 PDE3BQ13370 1112 aa23.18■■□□□ 1.3
LAMA5-204ENST00000462415 OVOS2A0A0G2JMS6 1433 aa23.17■■□□□ 1.3
LAMA5-204ENST00000462415 PARD3Q8TEW0 1356 aa23.17■■□□□ 1.3
LAMA5-204ENST00000462415 SBF2Q86WG5 1849 aa23.17■■□□□ 1.3
LAMA5-204ENST00000462415 UPF1Q92900 1129 aaKnown RBP eCLIP23.15■■□□□ 1.3
LAMA5-204ENST00000462415 EYA1Q99502 592 aa23.14■■□□□ 1.29
LAMA5-204ENST00000462415 IGSF1Q8N6C5 1336 aa23.12■■□□□ 1.29
LAMA5-204ENST00000462415 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
LAMA5-204ENST00000462415 DOT1LQ8TEK3 1739 aa23.12■■□□□ 1.29
LAMA5-204ENST00000462415 RAPGEF4Q8WZA2 1011 aa23.12■■□□□ 1.29
LAMA5-204ENST00000462415 NHSQ6T4R5 1651 aa23.1■■□□□ 1.29
LAMA5-204ENST00000462415 EXOC5O00471 708 aa23.1■■□□□ 1.29
LAMA5-204ENST00000462415 MARCH10Q8NA82 808 aaPredicted RBP23.1■■□□□ 1.29
LAMA5-204ENST00000462415 TATP17735 454 aaPredicted RBP23.09■■□□□ 1.29
LAMA5-204ENST00000462415 IL13P35225 146 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms