RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 KANK3Q6NY19 840 aa10.74□□□□□ -0.69
CUL3-208ENST00000454323 DNMT3AQ9Y6K1 912 aaPredicted RBP10.74□□□□□ -0.69
CUL3-208ENST00000454323 MAGEB6P1A0A0J9YX57 407 aa10.73□□□□□ -0.69
CUL3-208ENST00000454323 COL25A1Q9BXS0 654 aaPredicted RBP10.73□□□□□ -0.69
CUL3-208ENST00000454323 SH3BP5LQ7L8J4 393 aa10.72□□□□□ -0.69
CUL3-208ENST00000454323 SPINT1O43278 529 aa10.71□□□□□ -0.69
CUL3-208ENST00000454323 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
CUL3-208ENST00000454323 PARP9Q8IXQ6 854 aa10.71□□□□□ -0.69
CUL3-208ENST00000454323 CCDC155Q8N6L0 562 aa10.71□□□□□ -0.69
CUL3-208ENST00000454323 CABLES1Q8TDN4 633 aa10.71□□□□□ -0.69
CUL3-208ENST00000454323 SCARF2Q96GP6 870 aaPredicted RBP10.71□□□□□ -0.69
CUL3-208ENST00000454323 PER1O15534 1290 aaPredicted RBP10.7□□□□□ -0.7
CUL3-208ENST00000454323 MARSP56192 900 aaKnown RBP10.7□□□□□ -0.7
CUL3-208ENST00000454323 KRT76Q01546 638 aa10.7□□□□□ -0.7
CUL3-208ENST00000454323 SV2AQ7L0J3 742 aa10.7□□□□□ -0.7
CUL3-208ENST00000454323 Q6ZVU0 165 aa10.69□□□□□ -0.7
CUL3-208ENST00000454323 GPR161Q8N6U8 529 aaKnown RBP10.69□□□□□ -0.7
CUL3-208ENST00000454323 TRIM52Q96A61 297 aa10.69□□□□□ -0.7
CUL3-208ENST00000454323 SLURP2P0DP57 97 aa10.68□□□□□ -0.7
CUL3-208ENST00000454323 PPP1R26Q5T8A7 1209 aaPredicted RBP10.68□□□□□ -0.7
CUL3-208ENST00000454323 ZNF385CQ66K41 422 aaPredicted RBP10.68□□□□□ -0.7
CUL3-208ENST00000454323 SLC10A4Q96EP9 437 aa10.68□□□□□ -0.7
CUL3-208ENST00000454323 ITGA6P23229 1130 aa10.67□□□□□ -0.7
CUL3-208ENST00000454323 TPRNQ4KMQ1 711 aa10.67□□□□□ -0.7
CUL3-208ENST00000454323 CARD14Q9BXL6 1004 aa10.67□□□□□ -0.7
CUL3-208ENST00000454323 SLC35F4A4IF30 521 aa10.66□□□□□ -0.7
CUL3-208ENST00000454323 FIGNL2A6NMB9 653 aa10.66□□□□□ -0.7
CUL3-208ENST00000454323 MAP3K10Q02779 954 aa10.66□□□□□ -0.7
CUL3-208ENST00000454323 ERFEQ4G0M1 354 aa10.66□□□□□ -0.7
CUL3-208ENST00000454323 ZC3H15Q8WU90 426 aaKnown RBP10.66□□□□□ -0.7
CUL3-208ENST00000454323 CDC14CA4D256 554 aa10.65□□□□□ -0.7
CUL3-208ENST00000454323 LILRB3O75022 631 aa10.65□□□□□ -0.7
CUL3-208ENST00000454323 AK7Q96M32 723 aa10.65□□□□□ -0.7
CUL3-208ENST00000454323 ZC3H4Q9UPT8 1303 aaKnown RBP10.64□□□□□ -0.71
CUL3-208ENST00000454323 IRS1P35568 1242 aa10.64□□□□□ -0.71
CUL3-208ENST00000454323 PDXDC2PQ6P474 469 aa10.64□□□□□ -0.71
CUL3-208ENST00000454323 ARHGAP9Q9BRR9 750 aa10.64□□□□□ -0.71
CUL3-208ENST00000454323 ENAMQ9NRM1 1142 aa10.64□□□□□ -0.71
CUL3-208ENST00000454323 TRIM66O15016 1216 aa10.63□□□□□ -0.71
CUL3-208ENST00000454323 MYSM1Q5VVJ2 828 aa10.63□□□□□ -0.71
CUL3-208ENST00000454323 GPAT2Q6NUI2 795 aa10.63□□□□□ -0.71
CUL3-208ENST00000454323 KCTD15Q96SI1 283 aaPredicted RBP10.62□□□□□ -0.71
CUL3-208ENST00000454323 RSPH6AQ9H0K4 717 aa10.62□□□□□ -0.71
CUL3-208ENST00000454323 ARHGEF15O94989 841 aa10.61□□□□□ -0.71
CUL3-208ENST00000454323 QPCTQ16769 361 aa10.61□□□□□ -0.71
CUL3-208ENST00000454323 ZBTB33Q86T24 672 aa10.61□□□□□ -0.71
CUL3-208ENST00000454323 VWA5B2Q8N398 1253 aa10.61□□□□□ -0.71
CUL3-208ENST00000454323 LIMD1Q9UGP4 676 aa10.61□□□□□ -0.71
CUL3-208ENST00000454323 CBLBQ13191 982 aa10.6□□□□□ -0.71
CUL3-208ENST00000454323 POLMQ9NP87 494 aaPredicted RBP10.6□□□□□ -0.71
CUL3-208ENST00000454323 CLK2P49760 499 aaKnown RBP10.59□□□□□ -0.71
CUL3-208ENST00000454323 SRSF11Q05519 484 aaKnown RBP10.59□□□□□ -0.71
CUL3-208ENST00000454323 NBPF20Q3BBV1 942 aa10.59□□□□□ -0.71
CUL3-208ENST00000454323 RNFT1Q5M7Z0 435 aa10.59□□□□□ -0.71
CUL3-208ENST00000454323 PNMA1Q8ND90 353 aa10.59□□□□□ -0.71
CUL3-208ENST00000454323 PHF20L1A8MW92 1017 aa10.57□□□□□ -0.72
CUL3-208ENST00000454323 FKBPLQ9UIM3 349 aa10.57□□□□□ -0.72
CUL3-208ENST00000454323 GPSM3Q9Y4H4 160 aa10.57□□□□□ -0.72
CUL3-208ENST00000454323 RELBQ01201 579 aa10.56□□□□□ -0.72
CUL3-208ENST00000454323 PTK2Q05397 1052 aa10.56□□□□□ -0.72
CUL3-208ENST00000454323 GMCL1Q96IK5 515 aa10.56□□□□□ -0.72
CUL3-208ENST00000454323 ADAMTS2O95450 1211 aa10.55□□□□□ -0.72
CUL3-208ENST00000454323 CTSOP43234 321 aaPredicted RBP10.54□□□□□ -0.72
CUL3-208ENST00000454323 FOXR1Q6PIV2 292 aa10.54□□□□□ -0.72
CUL3-208ENST00000454323 RNF217Q8TC41 542 aa10.54□□□□□ -0.72
CUL3-208ENST00000454323 INSM2Q96T92 566 aaPredicted RBP10.54□□□□□ -0.72
CUL3-208ENST00000454323 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
CUL3-208ENST00000454323 INTS6LQ5JSJ4 861 aaKnown RBP10.53□□□□□ -0.72
CUL3-208ENST00000454323 PODNQ7Z5L7 613 aa10.53□□□□□ -0.72
CUL3-208ENST00000454323 WHAMMQ8TF30 809 aa10.53□□□□□ -0.72
CUL3-208ENST00000454323 ADH1AP07327 375 aa10.51□□□□□ -0.73
CUL3-208ENST00000454323 AGBL1Q96MI9 1066 aa10.51□□□□□ -0.73
CUL3-208ENST00000454323 PDE4DQ08499 809 aa10.5□□□□□ -0.73
CUL3-208ENST00000454323 LYSMD3Q7Z3D4 306 aa10.5□□□□□ -0.73
CUL3-208ENST00000454323 MSTNO14793 375 aa10.49□□□□□ -0.73
CUL3-208ENST00000454323 CELA2BP08218 269 aaPredicted RBP10.48□□□□□ -0.73
CUL3-208ENST00000454323 LYPD4Q6UWN0 246 aa10.48□□□□□ -0.73
CUL3-208ENST00000454323 BEND7Q8N7W2 519 aaPredicted RBP10.48□□□□□ -0.73
CUL3-208ENST00000454323 MBIPQ9NS73 344 aa10.48□□□□□ -0.73
CUL3-208ENST00000454323 SENP3-EIF4A1A0A087X0R7 540 aa10.47□□□□□ -0.73
CUL3-208ENST00000454323 ZNF395Q9H8N7 513 aaPredicted RBP10.47□□□□□ -0.73
CUL3-208ENST00000454323 PTGIRP43119 386 aa10.46□□□□□ -0.73
CUL3-208ENST00000454323 CTDSPL2Q05D32 466 aa10.46□□□□□ -0.73
CUL3-208ENST00000454323 NSFL1CQ9UNZ2 370 aaKnown RBP10.46□□□□□ -0.73
CUL3-208ENST00000454323 H7C1W4 665 aa10.45□□□□□ -0.74
CUL3-208ENST00000454323 PPP2R2DQ66LE6 453 aa10.44□□□□□ -0.74
CUL3-208ENST00000454323 DZIP3Q86Y13 1208 aaKnown RBP10.44□□□□□ -0.74
CUL3-208ENST00000454323 CCDC125Q86Z20 511 aa10.44□□□□□ -0.74
CUL3-208ENST00000454323 SEPT12Q8IYM1 358 aa10.44□□□□□ -0.74
CUL3-208ENST00000454323 ZNF784Q8NCA9 323 aaPredicted RBP10.44□□□□□ -0.74
CUL3-208ENST00000454323 NEDD1Q8NHV4 660 aa10.44□□□□□ -0.74
CUL3-208ENST00000454323 ADAM32Q8TC27 787 aa10.44□□□□□ -0.74
CUL3-208ENST00000454323 LRRC4BQ9NT99 713 aa10.44□□□□□ -0.74
CUL3-208ENST00000454323 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
CUL3-208ENST00000454323 TRIM22Q8IYM9 498 aa10.43□□□□□ -0.74
CUL3-208ENST00000454323 GALNT6Q8NCL4 622 aa10.43□□□□□ -0.74
CUL3-208ENST00000454323 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
CUL3-208ENST00000454323 POLR3EQ9NVU0 708 aa10.43□□□□□ -0.74
CUL3-208ENST00000454323 BCRP11274 1271 aa10.41□□□□□ -0.74
CUL3-208ENST00000454323 GPC1P35052 558 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms