RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 MAP3K19Q56UN5 1328 aa19.87■□□□□ 0.77
NCKIPSD-207ENST00000453349 AXIN2Q9Y2T1 843 aa19.87■□□□□ 0.77
NCKIPSD-207ENST00000453349 POTEAQ6S8J7 498 aa19.86■□□□□ 0.77
NCKIPSD-207ENST00000453349 IP6K1Q92551 441 aa19.86■□□□□ 0.77
NCKIPSD-207ENST00000453349 PPM1GO15355 546 aaPredicted RBP19.85■□□□□ 0.77
NCKIPSD-207ENST00000453349 VPS72Q15906 364 aa19.85■□□□□ 0.77
NCKIPSD-207ENST00000453349 LTN1O94822 1766 aa19.85■□□□□ 0.77
NCKIPSD-207ENST00000453349 CAMTA1Q9Y6Y1 1673 aa19.84■□□□□ 0.77
NCKIPSD-207ENST00000453349 CSB-PGBD3P0DP91 1061 aa19.84■□□□□ 0.77
NCKIPSD-207ENST00000453349 RXRBP28702 533 aa19.84■□□□□ 0.77
NCKIPSD-207ENST00000453349 HOXC9P31274 260 aa19.84■□□□□ 0.77
NCKIPSD-207ENST00000453349 RBM6P78332 1123 aaKnown RBP19.83■□□□□ 0.77
NCKIPSD-207ENST00000453349 GJD4Q96KN9 370 aaPredicted RBP19.83■□□□□ 0.77
NCKIPSD-207ENST00000453349 POLKQ9UBT6 870 aa19.83■□□□□ 0.77
NCKIPSD-207ENST00000453349 LMO7Q8WWI1 1683 aa19.83■□□□□ 0.76
NCKIPSD-207ENST00000453349 ATRNO75882 1429 aa19.83■□□□□ 0.76
NCKIPSD-207ENST00000453349 COL18A1P39060 1754 aa19.83■□□□□ 0.76
NCKIPSD-207ENST00000453349 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.82■□□□□ 0.76
NCKIPSD-207ENST00000453349 ABCC6O95255 1503 aa19.82■□□□□ 0.76
NCKIPSD-207ENST00000453349 EMILIN1Q9Y6C2 1016 aa19.82■□□□□ 0.76
NCKIPSD-207ENST00000453349 KIF24Q5T7B8 1368 aa19.82■□□□□ 0.76
NCKIPSD-207ENST00000453349 LARP1Q6PKG0 1096 aaKnown RBP19.81■□□□□ 0.76
NCKIPSD-207ENST00000453349 BLMP54132 1417 aaPredicted RBP19.81■□□□□ 0.76
NCKIPSD-207ENST00000453349 RTL1A6NKG5 1358 aa19.81■□□□□ 0.76
NCKIPSD-207ENST00000453349 NRAPQ86VF7 1730 aa19.8■□□□□ 0.76
NCKIPSD-207ENST00000453349 TOM1L2Q6ZVM7 507 aa19.8■□□□□ 0.76
NCKIPSD-207ENST00000453349 ANKRD24Q8TF21 1146 aa19.8■□□□□ 0.76
NCKIPSD-207ENST00000453349 FLT4P35916 1363 aa19.8■□□□□ 0.76
NCKIPSD-207ENST00000453349 COL5A2P05997 1499 aaPredicted RBP19.79■□□□□ 0.76
NCKIPSD-207ENST00000453349 WDR17Q8IZU2 1322 aa19.79■□□□□ 0.76
NCKIPSD-207ENST00000453349 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
NCKIPSD-207ENST00000453349 LTV1Q96GA3 475 aaPredicted RBP19.79■□□□□ 0.76
NCKIPSD-207ENST00000453349 SPATA31A5Q5VU36 1347 aa19.78■□□□□ 0.76
NCKIPSD-207ENST00000453349 SPATA31A7Q8IWB4 1347 aa19.78■□□□□ 0.76
NCKIPSD-207ENST00000453349 RGPD5Q99666 1765 aa19.78■□□□□ 0.76
NCKIPSD-207ENST00000453349 HSP90AB2PQ58FF8 381 aa19.78■□□□□ 0.76
NCKIPSD-207ENST00000453349 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
NCKIPSD-207ENST00000453349 ERBB3P21860 1342 aa19.76■□□□□ 0.75
NCKIPSD-207ENST00000453349 SPATA31A1Q5TZJ5 1347 aa19.76■□□□□ 0.75
NCKIPSD-207ENST00000453349 CRB1P82279 1406 aa19.76■□□□□ 0.75
NCKIPSD-207ENST00000453349 INSRP06213 1382 aa19.76■□□□□ 0.75
NCKIPSD-207ENST00000453349 MTHFSP49914 203 aa19.76■□□□□ 0.75
NCKIPSD-207ENST00000453349 NLRP2Q9NX02 1062 aa19.76■□□□□ 0.75
NCKIPSD-207ENST00000453349 THRAP3Q9Y2W1 955 aaKnown RBP19.76■□□□□ 0.75
NCKIPSD-207ENST00000453349 TCP11L2Q8N4U5 519 aa19.75■□□□□ 0.75
NCKIPSD-207ENST00000453349 SMG6Q86US8 1419 aaKnown RBP19.75■□□□□ 0.75
NCKIPSD-207ENST00000453349 RALBP1Q15311 655 aa19.74■□□□□ 0.75
NCKIPSD-207ENST00000453349 CARD10Q9BWT7 1032 aa19.74■□□□□ 0.75
NCKIPSD-207ENST00000453349 PEAK1Q9H792 1746 aa19.73■□□□□ 0.75
NCKIPSD-207ENST00000453349 A0A0G2JS52 829 aa19.72■□□□□ 0.75
NCKIPSD-207ENST00000453349 MYT1Q01538 1121 aa19.72■□□□□ 0.75
NCKIPSD-207ENST00000453349 FAM98CQ17RN3 349 aaKnown RBP19.72■□□□□ 0.75
NCKIPSD-207ENST00000453349 BARGINQ6ZT62 677 aa19.72■□□□□ 0.75
NCKIPSD-207ENST00000453349 ONECUT3O60422 494 aaPredicted RBP19.71■□□□□ 0.75
NCKIPSD-207ENST00000453349 PPP2R1AP30153 589 aa19.71■□□□□ 0.75
NCKIPSD-207ENST00000453349 GLI3P10071 1580 aa19.7■□□□□ 0.74
NCKIPSD-207ENST00000453349 PARD3Q8TEW0 1356 aa19.7■□□□□ 0.74
NCKIPSD-207ENST00000453349 CFAP53Q96M91 514 aa19.69■□□□□ 0.74
NCKIPSD-207ENST00000453349 CDK12Q9NYV4 1490 aaPredicted RBP19.68■□□□□ 0.74
NCKIPSD-207ENST00000453349 EIF4A2Q14240 407 aaKnown RBP19.68■□□□□ 0.74
NCKIPSD-207ENST00000453349 NBPF6Q5VWK0 638 aa19.68■□□□□ 0.74
NCKIPSD-207ENST00000453349 SEPT12Q8IYM1 358 aa19.68■□□□□ 0.74
NCKIPSD-207ENST00000453349 NBPF4Q96M43 638 aa19.68■□□□□ 0.74
NCKIPSD-207ENST00000453349 CDCA7Q9BWT1 371 aaPredicted RBP19.68■□□□□ 0.74
NCKIPSD-207ENST00000453349 FAM208AQ9UK61 1670 aaKnown RBP19.67■□□□□ 0.74
NCKIPSD-207ENST00000453349 DIAPH1O60610 1272 aaKnown RBP19.66■□□□□ 0.74
NCKIPSD-207ENST00000453349 PRKRIP1Q9H875 184 aaPredicted RBP19.66■□□□□ 0.74
NCKIPSD-207ENST00000453349 ANP32CO43423 234 aa19.65■□□□□ 0.74
NCKIPSD-207ENST00000453349 ILDR2Q71H61 639 aa19.65■□□□□ 0.74
NCKIPSD-207ENST00000453349 EYA1Q99502 592 aa19.65■□□□□ 0.74
NCKIPSD-207ENST00000453349 IL2RBP14784 551 aa19.64■□□□□ 0.73
NCKIPSD-207ENST00000453349 RGS12O14924 1447 aa19.63■□□□□ 0.73
NCKIPSD-207ENST00000453349 MYBBP1AQ9BQG0 1328 aaKnown RBP19.63■□□□□ 0.73
NCKIPSD-207ENST00000453349 IL13P35225 146 aa19.63■□□□□ 0.73
NCKIPSD-207ENST00000453349 USHBP1Q8N6Y0 703 aa19.63■□□□□ 0.73
NCKIPSD-207ENST00000453349 EXOC5O00471 708 aa19.62■□□□□ 0.73
NCKIPSD-207ENST00000453349 PDE3BQ13370 1112 aa19.62■□□□□ 0.73
NCKIPSD-207ENST00000453349 RAPGEF4Q8WZA2 1011 aa19.62■□□□□ 0.73
NCKIPSD-207ENST00000453349 NUDCQ9Y266 331 aa19.62■□□□□ 0.73
NCKIPSD-207ENST00000453349 DDB1Q16531 1140 aa19.61■□□□□ 0.73
NCKIPSD-207ENST00000453349 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
NCKIPSD-207ENST00000453349 TATP17735 454 aaPredicted RBP19.6■□□□□ 0.73
NCKIPSD-207ENST00000453349 KRT27Q7Z3Y8 459 aa19.6■□□□□ 0.73
NCKIPSD-207ENST00000453349 IGSF1Q8N6C5 1336 aa19.58■□□□□ 0.73
NCKIPSD-207ENST00000453349 U2SURPO15042 1029 aaKnown RBP19.58■□□□□ 0.72
NCKIPSD-207ENST00000453349 THSD7AQ9UPZ6 1657 aa19.58■□□□□ 0.72
NCKIPSD-207ENST00000453349 SULT6B1Q6IMI4 303 aa19.57■□□□□ 0.72
NCKIPSD-207ENST00000453349 DISP2A7MBM2 1401 aa19.57■□□□□ 0.72
NCKIPSD-207ENST00000453349 ZCRB1Q8TBF4 217 aaKnown RBP19.55■□□□□ 0.72
NCKIPSD-207ENST00000453349 PARP4Q9UKK3 1724 aaKnown RBP19.55■□□□□ 0.72
NCKIPSD-207ENST00000453349 WNK3Q9BYP7 1800 aa19.55■□□□□ 0.72
NCKIPSD-207ENST00000453349 COL3A1P02461 1466 aaPredicted RBP19.54■□□□□ 0.72
NCKIPSD-207ENST00000453349 NCAPD2Q15021 1401 aa19.54■□□□□ 0.72
NCKIPSD-207ENST00000453349 BRWD3Q6RI45 1802 aa19.53■□□□□ 0.72
NCKIPSD-207ENST00000453349 HMOX1P09601 288 aa19.53■□□□□ 0.72
NCKIPSD-207ENST00000453349 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
NCKIPSD-207ENST00000453349 U2AF1L5P0DN76 240 aaPredicted RBP19.52■□□□□ 0.72
NCKIPSD-207ENST00000453349 U2AF1Q01081 240 aaKnown RBP eCLIP19.52■□□□□ 0.72
NCKIPSD-207ENST00000453349 DDX54Q8TDD1 881 aaKnown RBP19.52■□□□□ 0.72
NCKIPSD-207ENST00000453349 OVOS2A0A0G2JMS6 1433 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms