RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 ARHGAP9Q9BRR9 750 aa6.87□□□□□ -1.31
HMGB3P22-202ENST00000451823 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
HMGB3P22-202ENST00000451823 MAP4K5Q9Y4K4 846 aa6.87□□□□□ -1.31
HMGB3P22-202ENST00000451823 FIGNL2A6NMB9 653 aa6.86□□□□□ -1.31
HMGB3P22-202ENST00000451823 PPFIA3O75145 1194 aa6.86□□□□□ -1.31
HMGB3P22-202ENST00000451823 CBLBQ13191 982 aa6.86□□□□□ -1.31
HMGB3P22-202ENST00000451823 ZBTB33Q86T24 672 aa6.86□□□□□ -1.31
HMGB3P22-202ENST00000451823 TSEN34Q9BSV6 310 aaKnown RBP6.86□□□□□ -1.31
HMGB3P22-202ENST00000451823 FKBPLQ9UIM3 349 aa6.86□□□□□ -1.31
HMGB3P22-202ENST00000451823 SOS2Q07890 1332 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P22-202ENST00000451823 AP1G2O75843 785 aa6.85□□□□□ -1.31
HMGB3P22-202ENST00000451823 PPP1R26Q5T8A7 1209 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P22-202ENST00000451823 MEIOBQ8N635 442 aa6.85□□□□□ -1.31
HMGB3P22-202ENST00000451823 KCTD15Q96SI1 283 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P22-202ENST00000451823 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.84□□□□□ -1.31
HMGB3P22-202ENST00000451823 DNMT3LQ9UJW3 386 aa6.84□□□□□ -1.31
HMGB3P22-202ENST00000451823 PTK2Q05397 1052 aa6.83□□□□□ -1.32
HMGB3P22-202ENST00000451823 SH3D19Q5HYK7 790 aa6.83□□□□□ -1.32
HMGB3P22-202ENST00000451823 PPP2R2DQ66LE6 453 aa6.83□□□□□ -1.32
HMGB3P22-202ENST00000451823 EPS8L1Q8TE68 723 aa6.83□□□□□ -1.32
HMGB3P22-202ENST00000451823 DDRGK1Q96HY6 314 aa6.83□□□□□ -1.32
HMGB3P22-202ENST00000451823 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
HMGB3P22-202ENST00000451823 TTLL8A6PVC2 850 aa6.82□□□□□ -1.32
HMGB3P22-202ENST00000451823 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.81□□□□□ -1.32
HMGB3P22-202ENST00000451823 Q6ZVU0 165 aa6.81□□□□□ -1.32
HMGB3P22-202ENST00000451823 GPR161Q8N6U8 529 aaKnown RBP6.81□□□□□ -1.32
HMGB3P22-202ENST00000451823 AGBL1Q96MI9 1066 aa6.81□□□□□ -1.32
HMGB3P22-202ENST00000451823 OCSTAMPQ9BR26 566 aa6.81□□□□□ -1.32
HMGB3P22-202ENST00000451823 MYO15BQ96JP2 1530 aa6.81□□□□□ -1.32
HMGB3P22-202ENST00000451823 VSIG8P0DPA2 414 aa6.8□□□□□ -1.32
HMGB3P22-202ENST00000451823 ADAM32Q8TC27 787 aa6.8□□□□□ -1.32
HMGB3P22-202ENST00000451823 SLC10A4Q96EP9 437 aa6.8□□□□□ -1.32
HMGB3P22-202ENST00000451823 RAB15P59190 212 aa6.79□□□□□ -1.32
HMGB3P22-202ENST00000451823 RELBQ01201 579 aa6.79□□□□□ -1.32
HMGB3P22-202ENST00000451823 PTSQ03393 145 aa6.79□□□□□ -1.32
HMGB3P22-202ENST00000451823 DHX9Q08211 1270 aaKnown RBP6.79□□□□□ -1.32
HMGB3P22-202ENST00000451823 ZNF395Q9H8N7 513 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P22-202ENST00000451823 TMPRSS4Q9NRS4 437 aa6.79□□□□□ -1.32
HMGB3P22-202ENST00000451823 CDV3Q9UKY7 258 aaKnown RBP6.79□□□□□ -1.32
HMGB3P22-202ENST00000451823 SPINT1O43278 529 aa6.78□□□□□ -1.32
HMGB3P22-202ENST00000451823 INTS6LQ5JSJ4 861 aaKnown RBP6.78□□□□□ -1.32
HMGB3P22-202ENST00000451823 BCANQ96GW7 911 aa6.78□□□□□ -1.32
HMGB3P22-202ENST00000451823 HMX1Q9NP08 348 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P22-202ENST00000451823 ZC3H4Q9UPT8 1303 aaKnown RBP6.77□□□□□ -1.32
HMGB3P22-202ENST00000451823 ADD1P35611 737 aaKnown RBP6.77□□□□□ -1.33
HMGB3P22-202ENST00000451823 CTSOP43234 321 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P22-202ENST00000451823 DZIP3Q86Y13 1208 aaKnown RBP6.77□□□□□ -1.33
HMGB3P22-202ENST00000451823 CCDC155Q8N6L0 562 aa6.77□□□□□ -1.33
HMGB3P22-202ENST00000451823 INSM2Q96T92 566 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P22-202ENST00000451823 GPSM3Q9Y4H4 160 aa6.77□□□□□ -1.33
HMGB3P22-202ENST00000451823 RFC5P40937 340 aa6.76□□□□□ -1.33
HMGB3P22-202ENST00000451823 VWA5B2Q8N398 1253 aa6.76□□□□□ -1.33
HMGB3P22-202ENST00000451823 CNTNAP3BQ96NU0 1288 aa6.76□□□□□ -1.33
HMGB3P22-202ENST00000451823 CNTNAP3Q9BZ76 1288 aa6.76□□□□□ -1.33
HMGB3P22-202ENST00000451823 DCAF1Q9Y4B6 1507 aa6.76□□□□□ -1.33
HMGB3P22-202ENST00000451823 ZCCHC6Q5VYS8 1495 aaKnown RBP6.75□□□□□ -1.33
HMGB3P22-202ENST00000451823 ERVH48-1M5A8F1 160 aa6.75□□□□□ -1.33
HMGB3P22-202ENST00000451823 USP17L8P0C7I0 530 aa6.75□□□□□ -1.33
HMGB3P22-202ENST00000451823 PNMA1Q8ND90 353 aa6.75□□□□□ -1.33
HMGB3P22-202ENST00000451823 IL27Q8NEV9 243 aa6.75□□□□□ -1.33
HMGB3P22-202ENST00000451823 POLMQ9NP87 494 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P22-202ENST00000451823 SLC35F4A4IF30 521 aa6.74□□□□□ -1.33
HMGB3P22-202ENST00000451823 ZNF784Q8NCA9 323 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P22-202ENST00000451823 KRT76Q01546 638 aa6.73□□□□□ -1.33
HMGB3P22-202ENST00000451823 NANOS1Q8WY41 292 aaKnown RBP6.73□□□□□ -1.33
HMGB3P22-202ENST00000451823 PCMTD1Q96MG8 357 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P22-202ENST00000451823 COL25A1Q9BXS0 654 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P22-202ENST00000451823 LILRA1O75019 489 aa6.72□□□□□ -1.33
HMGB3P22-202ENST00000451823 PTGIRP43119 386 aa6.72□□□□□ -1.33
HMGB3P22-202ENST00000451823 NBPF20Q3BBV1 942 aa6.72□□□□□ -1.33
HMGB3P22-202ENST00000451823 TMEM259Q4ZIN3 620 aa6.72□□□□□ -1.33
HMGB3P22-202ENST00000451823 GIGYF1O75420 1035 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P22-202ENST00000451823 SV2AQ7L0J3 742 aa6.71□□□□□ -1.34
HMGB3P22-202ENST00000451823 KDF1Q8NAX2 398 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P22-202ENST00000451823 TRIM34Q9BYJ4 488 aa6.71□□□□□ -1.34
HMGB3P22-202ENST00000451823 CDC14CA4D256 554 aa6.7□□□□□ -1.34
HMGB3P22-202ENST00000451823 ITGA6P23229 1130 aa6.7□□□□□ -1.34
HMGB3P22-202ENST00000451823 RNFT1Q5M7Z0 435 aa6.7□□□□□ -1.34
HMGB3P22-202ENST00000451823 RNF217Q8TC41 542 aa6.7□□□□□ -1.34
HMGB3P22-202ENST00000451823 ADAMTS8Q9UP79 889 aa6.7□□□□□ -1.34
HMGB3P22-202ENST00000451823 SHROOM4Q9ULL8 1493 aa6.7□□□□□ -1.34
HMGB3P22-202ENST00000451823 ESPNB1AK53 854 aa6.69□□□□□ -1.34
HMGB3P22-202ENST00000451823 ADH1AP07327 375 aa6.69□□□□□ -1.34
HMGB3P22-202ENST00000451823 NEUROD2Q15784 382 aa6.69□□□□□ -1.34
HMGB3P22-202ENST00000451823 PRICKLE2Q7Z3G6 844 aa6.69□□□□□ -1.34
HMGB3P22-202ENST00000451823 GOPCQ9HD26 462 aa6.69□□□□□ -1.34
HMGB3P22-202ENST00000451823 CYLDQ9NQC7 956 aa6.69□□□□□ -1.34
HMGB3P22-202ENST00000451823 LYSMD3Q7Z3D4 306 aa6.68□□□□□ -1.34
HMGB3P22-202ENST00000451823 PCDHB9Q9Y5E1 797 aa6.68□□□□□ -1.34
HMGB3P22-202ENST00000451823 SENP3-EIF4A1A0A087X0R7 540 aa6.67□□□□□ -1.34
HMGB3P22-202ENST00000451823 ZBBXA8MT70 800 aa6.67□□□□□ -1.34
HMGB3P22-202ENST00000451823 SUPT5HO00267 1087 aaKnown RBP6.67□□□□□ -1.34
HMGB3P22-202ENST00000451823 KCNMA1Q12791 1236 aa6.67□□□□□ -1.34
HMGB3P22-202ENST00000451823 FOXD4L5Q5VV16 416 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P22-202ENST00000451823 PPARGC1BQ86YN6 1023 aaKnown RBP6.67□□□□□ -1.34
HMGB3P22-202ENST00000451823 WHAMMQ8TF30 809 aa6.67□□□□□ -1.34
HMGB3P22-202ENST00000451823 CCDC180Q9P1Z9 1646 aa6.66□□□□□ -1.34
HMGB3P22-202ENST00000451823 RHOQP17081 205 aa6.66□□□□□ -1.34
HMGB3P22-202ENST00000451823 SEPT12Q8IYM1 358 aa6.66□□□□□ -1.34
HMGB3P22-202ENST00000451823 PCGF6Q9BYE7 350 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms