RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
TM9SF4-204ENST00000442842 ABCC6O95255 1503 aa18.32■□□□□ 0.52
TM9SF4-204ENST00000442842 CDK12Q9NYV4 1490 aaPredicted RBP18.32■□□□□ 0.52
TM9SF4-204ENST00000442842 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
TM9SF4-204ENST00000442842 MTHFSP49914 203 aa18.31■□□□□ 0.52
TM9SF4-204ENST00000442842 BTG4Q9NY30 223 aa18.31■□□□□ 0.52
TM9SF4-204ENST00000442842 LTV1Q96GA3 475 aaPredicted RBP18.3■□□□□ 0.52
TM9SF4-204ENST00000442842 BLMP54132 1417 aaPredicted RBP18.3■□□□□ 0.52
TM9SF4-204ENST00000442842 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
TM9SF4-204ENST00000442842 CAMTA1Q9Y6Y1 1673 aa18.29■□□□□ 0.52
TM9SF4-204ENST00000442842 IP6K1Q92551 441 aa18.29■□□□□ 0.52
TM9SF4-204ENST00000442842 STRN4Q9NRL3 753 aa18.29■□□□□ 0.52
TM9SF4-204ENST00000442842 AXIN2Q9Y2T1 843 aa18.29■□□□□ 0.52
TM9SF4-204ENST00000442842 SLIT2O94813 1529 aa18.28■□□□□ 0.52
TM9SF4-204ENST00000442842 AFF2P51816 1311 aa18.28■□□□□ 0.52
TM9SF4-204ENST00000442842 COL5A2P05997 1499 aaPredicted RBP18.28■□□□□ 0.52
TM9SF4-204ENST00000442842 COL18A1P39060 1754 aa18.28■□□□□ 0.52
TM9SF4-204ENST00000442842 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
TM9SF4-204ENST00000442842 NRAPQ86VF7 1730 aa18.27■□□□□ 0.52
TM9SF4-204ENST00000442842 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.52
TM9SF4-204ENST00000442842 ANKRD24Q8TF21 1146 aa18.27■□□□□ 0.52
TM9SF4-204ENST00000442842 MAP2P11137 1827 aaKnown RBP18.26■□□□□ 0.51
TM9SF4-204ENST00000442842 CFAP53Q96M91 514 aa18.26■□□□□ 0.51
TM9SF4-204ENST00000442842 INSRP06213 1382 aa18.26■□□□□ 0.51
TM9SF4-204ENST00000442842 EVA1CP58658 441 aa18.25■□□□□ 0.51
TM9SF4-204ENST00000442842 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
TM9SF4-204ENST00000442842 USP21Q9UK80 565 aa18.25■□□□□ 0.51
TM9SF4-204ENST00000442842 NWD2Q9ULI1 1742 aa18.25■□□□□ 0.51
TM9SF4-204ENST00000442842 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
TM9SF4-204ENST00000442842 ERBB3P21860 1342 aa18.24■□□□□ 0.51
TM9SF4-204ENST00000442842 RGPD5Q99666 1765 aa18.23■□□□□ 0.51
TM9SF4-204ENST00000442842 BCL9LQ86UU0 1499 aa18.23■□□□□ 0.51
TM9SF4-204ENST00000442842 EIF4A2Q14240 407 aaKnown RBP18.23■□□□□ 0.51
TM9SF4-204ENST00000442842 FNBP4Q8N3X1 1017 aaPredicted RBP18.23■□□□□ 0.51
TM9SF4-204ENST00000442842 CCDC9Q9Y3X0 531 aaKnown RBP18.23■□□□□ 0.51
TM9SF4-204ENST00000442842 LARP1Q6PKG0 1096 aaKnown RBP18.22■□□□□ 0.51
TM9SF4-204ENST00000442842 TOM1L2Q6ZVM7 507 aa18.22■□□□□ 0.51
TM9SF4-204ENST00000442842 UNC5CLQ8IV45 518 aa18.22■□□□□ 0.51
TM9SF4-204ENST00000442842 WDR17Q8IZU2 1322 aa18.22■□□□□ 0.51
TM9SF4-204ENST00000442842 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
TM9SF4-204ENST00000442842 NLRP2Q9NX02 1062 aa18.21■□□□□ 0.51
TM9SF4-204ENST00000442842 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.2■□□□□ 0.5
TM9SF4-204ENST00000442842 MIER1Q8N108 512 aa18.2■□□□□ 0.5
TM9SF4-204ENST00000442842 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
TM9SF4-204ENST00000442842 USP35Q9P2H5 1018 aa18.2■□□□□ 0.5
TM9SF4-204ENST00000442842 U2SURPO15042 1029 aaKnown RBP18.19■□□□□ 0.5
TM9SF4-204ENST00000442842 CRB1P82279 1406 aa18.19■□□□□ 0.5
TM9SF4-204ENST00000442842 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
TM9SF4-204ENST00000442842 MRS2Q9HD23 443 aa18.19■□□□□ 0.5
TM9SF4-204ENST00000442842 FAM208AQ9UK61 1670 aaKnown RBP18.18■□□□□ 0.5
TM9SF4-204ENST00000442842 IL13P35225 146 aa18.18■□□□□ 0.5
TM9SF4-204ENST00000442842 ATRNO75882 1429 aa18.17■□□□□ 0.5
TM9SF4-204ENST00000442842 ZNF772Q68DY9 489 aaPredicted RBP18.17■□□□□ 0.5
TM9SF4-204ENST00000442842 VPS72Q15906 364 aa18.16■□□□□ 0.5
TM9SF4-204ENST00000442842 NBPF6Q5VWK0 638 aa18.16■□□□□ 0.5
TM9SF4-204ENST00000442842 NBPF4Q96M43 638 aa18.16■□□□□ 0.5
TM9SF4-204ENST00000442842 TRPC5Q9UL62 973 aaPredicted RBP18.16■□□□□ 0.5
TM9SF4-204ENST00000442842 EYA1Q99502 592 aa18.15■□□□□ 0.5
TM9SF4-204ENST00000442842 NUDCQ9Y266 331 aa18.15■□□□□ 0.5
TM9SF4-204ENST00000442842 WDR43Q15061 677 aaKnown RBP eCLIP18.14■□□□□ 0.49
TM9SF4-204ENST00000442842 QTRT2Q9H974 415 aaKnown RBP18.14■□□□□ 0.49
TM9SF4-204ENST00000442842 SPATA31A5Q5VU36 1347 aa18.14■□□□□ 0.49
TM9SF4-204ENST00000442842 SPATA31A7Q8IWB4 1347 aa18.14■□□□□ 0.49
TM9SF4-204ENST00000442842 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
TM9SF4-204ENST00000442842 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.49
TM9SF4-204ENST00000442842 RGPD1P0DJD0 1748 aa18.13■□□□□ 0.49
TM9SF4-204ENST00000442842 HMOX1P09601 288 aa18.13■□□□□ 0.49
TM9SF4-204ENST00000442842 U2AF1L5P0DN76 240 aaPredicted RBP18.13■□□□□ 0.49
TM9SF4-204ENST00000442842 U2AF1Q01081 240 aaKnown RBP eCLIP18.13■□□□□ 0.49
TM9SF4-204ENST00000442842 CARD10Q9BWT7 1032 aa18.13■□□□□ 0.49
TM9SF4-204ENST00000442842 SPATA31A1Q5TZJ5 1347 aa18.13■□□□□ 0.49
TM9SF4-204ENST00000442842 GLI3P10071 1580 aa18.13■□□□□ 0.49
TM9SF4-204ENST00000442842 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
TM9SF4-204ENST00000442842 RGS17Q9UGC6 210 aaPredicted RBP18.12■□□□□ 0.49
TM9SF4-204ENST00000442842 A0A0G2JS52 829 aa18.11■□□□□ 0.49
TM9SF4-204ENST00000442842 MYT1Q01538 1121 aa18.11■□□□□ 0.49
TM9SF4-204ENST00000442842 SULT6B1Q6IMI4 303 aa18.11■□□□□ 0.49
TM9SF4-204ENST00000442842 TCP11L2Q8N4U5 519 aa18.11■□□□□ 0.49
TM9SF4-204ENST00000442842 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
TM9SF4-204ENST00000442842 FAM98CQ17RN3 349 aaKnown RBP18.1■□□□□ 0.49
TM9SF4-204ENST00000442842 GJD4Q96KN9 370 aaPredicted RBP18.1■□□□□ 0.49
TM9SF4-204ENST00000442842 MEGF6O75095 1541 aa18.09■□□□□ 0.49
TM9SF4-204ENST00000442842 NCAPD2Q15021 1401 aa18.09■□□□□ 0.49
TM9SF4-204ENST00000442842 WNK3Q9BYP7 1800 aa18.08■□□□□ 0.48
TM9SF4-204ENST00000442842 POTEAQ6S8J7 498 aa18.08■□□□□ 0.48
TM9SF4-204ENST00000442842 RAPGEF4Q8WZA2 1011 aa18.08■□□□□ 0.48
TM9SF4-204ENST00000442842 THRAP3Q9Y2W1 955 aaKnown RBP18.07■□□□□ 0.48
TM9SF4-204ENST00000442842 DISP2A7MBM2 1401 aa18.06■□□□□ 0.48
TM9SF4-204ENST00000442842 KDRP35968 1356 aa18.06■□□□□ 0.48
TM9SF4-204ENST00000442842 IL2RBP14784 551 aa18.06■□□□□ 0.48
TM9SF4-204ENST00000442842 TATP17735 454 aaPredicted RBP18.06■□□□□ 0.48
TM9SF4-204ENST00000442842 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
TM9SF4-204ENST00000442842 PARP4Q9UKK3 1724 aaKnown RBP18.06■□□□□ 0.48
TM9SF4-204ENST00000442842 RXRBP28702 533 aa18.05■□□□□ 0.48
TM9SF4-204ENST00000442842 PRKAR2BP31323 418 aa18.05■□□□□ 0.48
TM9SF4-204ENST00000442842 RBM6P78332 1123 aaKnown RBP18.05■□□□□ 0.48
TM9SF4-204ENST00000442842 RSPH6AQ9H0K4 717 aa18.05■□□□□ 0.48
TM9SF4-204ENST00000442842 OVOS2A0A0G2JMS6 1433 aa18.05■□□□□ 0.48
TM9SF4-204ENST00000442842 BARGINQ6ZT62 677 aa18.04■□□□□ 0.48
TM9SF4-204ENST00000442842 CCDC146Q8IYE0 955 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms