RNA–Protein interactions for RNA: ENST00000442139.5

ERGIC3-208, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-208ENST00000442139 COL5A2P05997 1499 aaPredicted RBP16.92■□□□□ 0.3
ERGIC3-208ENST00000442139 FLT4P35916 1363 aa16.91■□□□□ 0.3
ERGIC3-208ENST00000442139 SOX12O15370 315 aa16.91■□□□□ 0.3
ERGIC3-208ENST00000442139 AMPHP49418 695 aa16.91■□□□□ 0.3
ERGIC3-208ENST00000442139 VPS72Q15906 364 aa16.91■□□□□ 0.3
ERGIC3-208ENST00000442139 IP6K1Q92551 441 aa16.91■□□□□ 0.3
ERGIC3-208ENST00000442139 CDK12Q9NYV4 1490 aaPredicted RBP16.91■□□□□ 0.3
ERGIC3-208ENST00000442139 SMG6Q86US8 1419 aaKnown RBP16.9■□□□□ 0.3
ERGIC3-208ENST00000442139 CHRNA2Q15822 529 aa16.9■□□□□ 0.3
ERGIC3-208ENST00000442139 MAP3K19Q56UN5 1328 aa16.9■□□□□ 0.3
ERGIC3-208ENST00000442139 RBM6P78332 1123 aaKnown RBP16.89■□□□□ 0.29
ERGIC3-208ENST00000442139 QTRT2Q9H974 415 aaKnown RBP16.89■□□□□ 0.29
ERGIC3-208ENST00000442139 WNK3Q9BYP7 1800 aa16.89■□□□□ 0.29
ERGIC3-208ENST00000442139 ZBTB7CA1YPR0 619 aa16.88■□□□□ 0.29
ERGIC3-208ENST00000442139 DDX10Q13206 875 aaKnown RBP16.88■□□□□ 0.29
ERGIC3-208ENST00000442139 WDR17Q8IZU2 1322 aa16.88■□□□□ 0.29
ERGIC3-208ENST00000442139 CRB1P82279 1406 aa16.87■□□□□ 0.29
ERGIC3-208ENST00000442139 PEAK1Q9H792 1746 aa16.87■□□□□ 0.29
ERGIC3-208ENST00000442139 RXRBP28702 533 aa16.87■□□□□ 0.29
ERGIC3-208ENST00000442139 RGS17Q9UGC6 210 aaPredicted RBP16.87■□□□□ 0.29
ERGIC3-208ENST00000442139 THRAP3Q9Y2W1 955 aaKnown RBP16.87■□□□□ 0.29
ERGIC3-208ENST00000442139 INSRP06213 1382 aa16.87■□□□□ 0.29
ERGIC3-208ENST00000442139 HOXC9P31274 260 aa16.86■□□□□ 0.29
ERGIC3-208ENST00000442139 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
ERGIC3-208ENST00000442139 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
ERGIC3-208ENST00000442139 ERBB3P21860 1342 aa16.86■□□□□ 0.29
ERGIC3-208ENST00000442139 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
ERGIC3-208ENST00000442139 SPATA31A5Q5VU36 1347 aa16.85■□□□□ 0.29
ERGIC3-208ENST00000442139 SPATA31A7Q8IWB4 1347 aa16.85■□□□□ 0.29
ERGIC3-208ENST00000442139 GLI3P10071 1580 aa16.85■□□□□ 0.29
ERGIC3-208ENST00000442139 CSB-PGBD3P0DP91 1061 aa16.84■□□□□ 0.29
ERGIC3-208ENST00000442139 RRS1Q15050 365 aaKnown RBP16.84■□□□□ 0.29
ERGIC3-208ENST00000442139 STRN4Q9NRL3 753 aa16.84■□□□□ 0.29
ERGIC3-208ENST00000442139 POLKQ9UBT6 870 aa16.84■□□□□ 0.29
ERGIC3-208ENST00000442139 AXIN2Q9Y2T1 843 aa16.84■□□□□ 0.29
ERGIC3-208ENST00000442139 RGPD2P0DJD1 1756 aa16.83■□□□□ 0.28
ERGIC3-208ENST00000442139 RALBP1Q15311 655 aa16.83■□□□□ 0.28
ERGIC3-208ENST00000442139 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
ERGIC3-208ENST00000442139 CDCA7Q9BWT1 371 aaPredicted RBP16.83■□□□□ 0.28
ERGIC3-208ENST00000442139 CARD10Q9BWT7 1032 aa16.83■□□□□ 0.28
ERGIC3-208ENST00000442139 PARP4Q9UKK3 1724 aaKnown RBP16.82■□□□□ 0.28
ERGIC3-208ENST00000442139 PARD3Q8TEW0 1356 aa16.82■□□□□ 0.28
ERGIC3-208ENST00000442139 POTEAQ6S8J7 498 aa16.82■□□□□ 0.28
ERGIC3-208ENST00000442139 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
ERGIC3-208ENST00000442139 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
ERGIC3-208ENST00000442139 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
ERGIC3-208ENST00000442139 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
ERGIC3-208ENST00000442139 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
ERGIC3-208ENST00000442139 ANKRD24Q8TF21 1146 aa16.81■□□□□ 0.28
ERGIC3-208ENST00000442139 THSD7AQ9UPZ6 1657 aa16.81■□□□□ 0.28
ERGIC3-208ENST00000442139 ONECUT3O60422 494 aaPredicted RBP16.8■□□□□ 0.28
ERGIC3-208ENST00000442139 LARP1Q6PKG0 1096 aaKnown RBP16.8■□□□□ 0.28
ERGIC3-208ENST00000442139 EMILIN1Q9Y6C2 1016 aa16.8■□□□□ 0.28
ERGIC3-208ENST00000442139 PLEKHG2Q9H7P9 1386 aa16.79■□□□□ 0.28
ERGIC3-208ENST00000442139 CFAP53Q96M91 514 aa16.79■□□□□ 0.28
ERGIC3-208ENST00000442139 BRWD3Q6RI45 1802 aa16.79■□□□□ 0.28
ERGIC3-208ENST00000442139 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
ERGIC3-208ENST00000442139 FBLN1P23142 703 aa16.77■□□□□ 0.28
ERGIC3-208ENST00000442139 MTHFSP49914 203 aa16.77■□□□□ 0.28
ERGIC3-208ENST00000442139 NLRP2Q9NX02 1062 aa16.77■□□□□ 0.28
ERGIC3-208ENST00000442139 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
ERGIC3-208ENST00000442139 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
ERGIC3-208ENST00000442139 NCAPD2Q15021 1401 aa16.75■□□□□ 0.27
ERGIC3-208ENST00000442139 RGS12O14924 1447 aa16.74■□□□□ 0.27
ERGIC3-208ENST00000442139 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
ERGIC3-208ENST00000442139 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
ERGIC3-208ENST00000442139 MYBBP1AQ9BQG0 1328 aaKnown RBP16.73■□□□□ 0.27
ERGIC3-208ENST00000442139 FAM98CQ17RN3 349 aaKnown RBP16.73■□□□□ 0.27
ERGIC3-208ENST00000442139 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
ERGIC3-208ENST00000442139 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
ERGIC3-208ENST00000442139 IL2RBP14784 551 aa16.72■□□□□ 0.27
ERGIC3-208ENST00000442139 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
ERGIC3-208ENST00000442139 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
ERGIC3-208ENST00000442139 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
ERGIC3-208ENST00000442139 PKD1L3Q7Z443 1732 aa16.71■□□□□ 0.27
ERGIC3-208ENST00000442139 A0A0G2JS52 829 aa16.71■□□□□ 0.27
ERGIC3-208ENST00000442139 MYT1Q01538 1121 aa16.71■□□□□ 0.27
ERGIC3-208ENST00000442139 CNGB1Q14028 1251 aaPredicted RBP16.71■□□□□ 0.27
ERGIC3-208ENST00000442139 SEPT12Q8IYM1 358 aa16.71■□□□□ 0.27
ERGIC3-208ENST00000442139 PRKRIP1Q9H875 184 aaPredicted RBP16.71■□□□□ 0.27
ERGIC3-208ENST00000442139 COL3A1P02461 1466 aaPredicted RBP16.71■□□□□ 0.27
ERGIC3-208ENST00000442139 ANP32CO43423 234 aa16.7■□□□□ 0.26
ERGIC3-208ENST00000442139 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
ERGIC3-208ENST00000442139 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
ERGIC3-208ENST00000442139 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
ERGIC3-208ENST00000442139 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
ERGIC3-208ENST00000442139 TNS2Q63HR2 1409 aa16.69■□□□□ 0.26
ERGIC3-208ENST00000442139 IL13P35225 146 aa16.68■□□□□ 0.26
ERGIC3-208ENST00000442139 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
ERGIC3-208ENST00000442139 DDB1Q16531 1140 aa16.68■□□□□ 0.26
ERGIC3-208ENST00000442139 EYA1Q99502 592 aa16.68■□□□□ 0.26
ERGIC3-208ENST00000442139 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
ERGIC3-208ENST00000442139 KDRP35968 1356 aa16.67■□□□□ 0.26
ERGIC3-208ENST00000442139 EXOC5O00471 708 aa16.67■□□□□ 0.26
ERGIC3-208ENST00000442139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
ERGIC3-208ENST00000442139 SHANK3Q9BYB0 1731 aa16.67■□□□□ 0.26
ERGIC3-208ENST00000442139 KAT6BQ8WYB5 2073 aa16.66■□□□□ 0.26
ERGIC3-208ENST00000442139 SBF2Q86WG5 1849 aa16.66■□□□□ 0.26
ERGIC3-208ENST00000442139 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
ERGIC3-208ENST00000442139 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms