RNA–Protein interactions for RNA: ENST00000435142.1

USP9YP28-201, Transcript of USP9Y pseudogene 28, humanhuman

BASIC

Gene USP9YP28, Length 589 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP28-201ENST00000435142 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
USP9YP28-201ENST00000435142 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
USP9YP28-201ENST00000435142 COL25A1Q9BXS0 654 aaPredicted RBP11.23□□□□□ -0.61
USP9YP28-201ENST00000435142 HELBQ8NG08 1087 aaPredicted RBP11.22□□□□□ -0.61
USP9YP28-201ENST00000435142 NANOS1Q8WY41 292 aaKnown RBP11.22□□□□□ -0.61
USP9YP28-201ENST00000435142 RNF225M0QZC1 329 aaPredicted RBP11.21□□□□□ -0.61
USP9YP28-201ENST00000435142 AK7Q96M32 723 aa11.21□□□□□ -0.61
USP9YP28-201ENST00000435142 CARD14Q9BXL6 1004 aa11.21□□□□□ -0.61
USP9YP28-201ENST00000435142 CBLBQ13191 982 aa11.2□□□□□ -0.62
USP9YP28-201ENST00000435142 PPP1R26Q5T8A7 1209 aaPredicted RBP11.2□□□□□ -0.62
USP9YP28-201ENST00000435142 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
USP9YP28-201ENST00000435142 GPKOWQ92917 476 aaPredicted RBP eCLIP11.2□□□□□ -0.62
USP9YP28-201ENST00000435142 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
USP9YP28-201ENST00000435142 SPINT1O43278 529 aa11.19□□□□□ -0.62
USP9YP28-201ENST00000435142 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
USP9YP28-201ENST00000435142 Q6ZVU0 165 aa11.19□□□□□ -0.62
USP9YP28-201ENST00000435142 ERFEQ4G0M1 354 aa11.18□□□□□ -0.62
USP9YP28-201ENST00000435142 ZNF385CQ66K41 422 aaPredicted RBP11.17□□□□□ -0.62
USP9YP28-201ENST00000435142 SLC35F4A4IF30 521 aa11.16□□□□□ -0.62
USP9YP28-201ENST00000435142 RNFT1Q5M7Z0 435 aa11.16□□□□□ -0.62
USP9YP28-201ENST00000435142 SVOPQ8N4V2 548 aa11.16□□□□□ -0.62
USP9YP28-201ENST00000435142 VWA5B2Q8N398 1253 aa11.15□□□□□ -0.62
USP9YP28-201ENST00000435142 ITGA6P23229 1130 aa11.13□□□□□ -0.63
USP9YP28-201ENST00000435142 PDXDC2PQ6P474 469 aa11.13□□□□□ -0.63
USP9YP28-201ENST00000435142 KCTD15Q96SI1 283 aaPredicted RBP11.13□□□□□ -0.63
USP9YP28-201ENST00000435142 SLURP2P0DP57 97 aa11.12□□□□□ -0.63
USP9YP28-201ENST00000435142 SV2AQ7L0J3 742 aa11.12□□□□□ -0.63
USP9YP28-201ENST00000435142 WHAMMQ8TF30 809 aa11.12□□□□□ -0.63
USP9YP28-201ENST00000435142 ARHGAP9Q9BRR9 750 aa11.12□□□□□ -0.63
USP9YP28-201ENST00000435142 CDC14CA4D256 554 aa11.11□□□□□ -0.63
USP9YP28-201ENST00000435142 CLK2P49760 499 aaKnown RBP11.11□□□□□ -0.63
USP9YP28-201ENST00000435142 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
USP9YP28-201ENST00000435142 DHX9Q08211 1270 aaKnown RBP11.11□□□□□ -0.63
USP9YP28-201ENST00000435142 PDE4DQ08499 809 aa11.11□□□□□ -0.63
USP9YP28-201ENST00000435142 AGBL1Q96MI9 1066 aa11.11□□□□□ -0.63
USP9YP28-201ENST00000435142 CDV3Q9UKY7 258 aaKnown RBP11.11□□□□□ -0.63
USP9YP28-201ENST00000435142 ARHGEF15O94989 841 aa11.1□□□□□ -0.63
USP9YP28-201ENST00000435142 CTSOP43234 321 aaPredicted RBP11.1□□□□□ -0.63
USP9YP28-201ENST00000435142 SLC10A4Q96EP9 437 aa11.1□□□□□ -0.63
USP9YP28-201ENST00000435142 IRS1P35568 1242 aa11.09□□□□□ -0.63
USP9YP28-201ENST00000435142 RELBQ01201 579 aa11.09□□□□□ -0.63
USP9YP28-201ENST00000435142 MARSP56192 900 aaKnown RBP11.08□□□□□ -0.64
USP9YP28-201ENST00000435142 ZBTB33Q86T24 672 aa11.08□□□□□ -0.64
USP9YP28-201ENST00000435142 INSM2Q96T92 566 aaPredicted RBP11.08□□□□□ -0.64
USP9YP28-201ENST00000435142 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
USP9YP28-201ENST00000435142 FKBPLQ9UIM3 349 aa11.08□□□□□ -0.64
USP9YP28-201ENST00000435142 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
USP9YP28-201ENST00000435142 DNMT3AQ9Y6K1 912 aaPredicted RBP11.07□□□□□ -0.64
USP9YP28-201ENST00000435142 INTS6LQ5JSJ4 861 aaKnown RBP11.06□□□□□ -0.64
USP9YP28-201ENST00000435142 GPAT2Q6NUI2 795 aa11.06□□□□□ -0.64
USP9YP28-201ENST00000435142 POLMQ9NP87 494 aaPredicted RBP11.06□□□□□ -0.64
USP9YP28-201ENST00000435142 ZNF395Q9H8N7 513 aaPredicted RBP11.05□□□□□ -0.64
USP9YP28-201ENST00000435142 IGHA1P01876 353 aa11.04□□□□□ -0.64
USP9YP28-201ENST00000435142 KANK3Q6NY19 840 aa11.04□□□□□ -0.64
USP9YP28-201ENST00000435142 LRRN4Q8WUT4 740 aa11.04□□□□□ -0.64
USP9YP28-201ENST00000435142 SENP3-EIF4A1A0A087X0R7 540 aa11.03□□□□□ -0.64
USP9YP28-201ENST00000435142 RNF217Q8TC41 542 aa11.03□□□□□ -0.64
USP9YP28-201ENST00000435142 SCARF2Q96GP6 870 aaPredicted RBP11.03□□□□□ -0.64
USP9YP28-201ENST00000435142 ADAMTS2O95450 1211 aa11.02□□□□□ -0.65
USP9YP28-201ENST00000435142 PTK2Q05397 1052 aa11.01□□□□□ -0.65
USP9YP28-201ENST00000435142 NR6A1Q15406 480 aa11.01□□□□□ -0.65
USP9YP28-201ENST00000435142 ZC3H4Q9UPT8 1303 aaKnown RBP11.01□□□□□ -0.65
USP9YP28-201ENST00000435142 FOXK2Q01167 660 aa11□□□□□ -0.65
USP9YP28-201ENST00000435142 LYPD4Q6UWN0 246 aa11□□□□□ -0.65
USP9YP28-201ENST00000435142 OCSTAMPQ9BR26 566 aa11□□□□□ -0.65
USP9YP28-201ENST00000435142 TMPRSS4Q9NRS4 437 aa11□□□□□ -0.65
USP9YP28-201ENST00000435142 SRSF11Q05519 484 aaKnown RBP10.99□□□□□ -0.65
USP9YP28-201ENST00000435142 ADAM32Q8TC27 787 aa10.98□□□□□ -0.65
USP9YP28-201ENST00000435142 GPSM3Q9Y4H4 160 aa10.98□□□□□ -0.65
USP9YP28-201ENST00000435142 ADH1AP07327 375 aa10.97□□□□□ -0.65
USP9YP28-201ENST00000435142 MAP3K10Q02779 954 aa10.97□□□□□ -0.65
USP9YP28-201ENST00000435142 ZNF784Q8NCA9 323 aaPredicted RBP10.97□□□□□ -0.65
USP9YP28-201ENST00000435142 CELA2BP08218 269 aaPredicted RBP10.96□□□□□ -0.65
USP9YP28-201ENST00000435142 ADD1P35611 737 aaKnown RBP10.96□□□□□ -0.65
USP9YP28-201ENST00000435142 RAB15P59190 212 aa10.96□□□□□ -0.65
USP9YP28-201ENST00000435142 NBPF20Q3BBV1 942 aa10.96□□□□□ -0.65
USP9YP28-201ENST00000435142 FOXD4L5Q5VV16 416 aaPredicted RBP10.96□□□□□ -0.65
USP9YP28-201ENST00000435142 SLC24A3Q9HC58 644 aa10.96□□□□□ -0.65
USP9YP28-201ENST00000435142 PTGIRP43119 386 aa10.95□□□□□ -0.66
USP9YP28-201ENST00000435142 LYSMD3Q7Z3D4 306 aa10.95□□□□□ -0.66
USP9YP28-201ENST00000435142 CUEDC1Q9NWM3 386 aaPredicted RBP10.95□□□□□ -0.66
USP9YP28-201ENST00000435142 LILRA1O75019 489 aa10.94□□□□□ -0.66
USP9YP28-201ENST00000435142 GAS6Q14393 721 aa10.94□□□□□ -0.66
USP9YP28-201ENST00000435142 KDF1Q8NAX2 398 aaPredicted RBP10.94□□□□□ -0.66
USP9YP28-201ENST00000435142 ENAMQ9NRM1 1142 aa10.94□□□□□ -0.66
USP9YP28-201ENST00000435142 ERVH48-1M5A8F1 160 aa10.93□□□□□ -0.66
USP9YP28-201ENST00000435142 FBXO31Q5XUX0 539 aaPredicted RBP10.92□□□□□ -0.66
USP9YP28-201ENST00000435142 SKIV2LQ15477 1246 aaKnown RBP10.91□□□□□ -0.66
USP9YP28-201ENST00000435142 PRICKLE2Q7Z3G6 844 aa10.91□□□□□ -0.66
USP9YP28-201ENST00000435142 DZIP3Q86Y13 1208 aaKnown RBP10.91□□□□□ -0.66
USP9YP28-201ENST00000435142 PPP2R2DQ66LE6 453 aa10.89□□□□□ -0.67
USP9YP28-201ENST00000435142 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
USP9YP28-201ENST00000435142 EPS8L1Q8TE68 723 aa10.89□□□□□ -0.67
USP9YP28-201ENST00000435142 ATP1B4Q9UN42 357 aaPredicted RBP10.89□□□□□ -0.67
USP9YP28-201ENST00000435142 AP1G2O75843 785 aa10.88□□□□□ -0.67
USP9YP28-201ENST00000435142 RHOQP17081 205 aa10.88□□□□□ -0.67
USP9YP28-201ENST00000435142 RNF144AP50876 292 aaPredicted RBP10.88□□□□□ -0.67
USP9YP28-201ENST00000435142 PNMA1Q8ND90 353 aa10.88□□□□□ -0.67
USP9YP28-201ENST00000435142 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
USP9YP28-201ENST00000435142 PHF20L1A8MW92 1017 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms