RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ADAMTS2O95450 1211 aa14.86□□□□□ -0.03
CHD4-202ENST00000430771 AMPHP49418 695 aa14.86□□□□□ -0.03
CHD4-202ENST00000430771 RGPD5Q99666 1765 aa14.85□□□□□ -0.03
CHD4-202ENST00000430771 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
CHD4-202ENST00000430771 EMILIN1Q9Y6C2 1016 aa14.85□□□□□ -0.03
CHD4-202ENST00000430771 SLIT2O94813 1529 aa14.84□□□□□ -0.03
CHD4-202ENST00000430771 POLKQ9UBT6 870 aa14.84□□□□□ -0.03
CHD4-202ENST00000430771 COL5A2P05997 1499 aaPredicted RBP14.83□□□□□ -0.03
CHD4-202ENST00000430771 PPM1GO15355 546 aaPredicted RBP14.83□□□□□ -0.04
CHD4-202ENST00000430771 HOXC9P31274 260 aa14.83□□□□□ -0.04
CHD4-202ENST00000430771 CFAP53Q96M91 514 aa14.83□□□□□ -0.04
CHD4-202ENST00000430771 INSRP06213 1382 aa14.83□□□□□ -0.04
CHD4-202ENST00000430771 COL3A1P02461 1466 aaPredicted RBP14.82□□□□□ -0.04
CHD4-202ENST00000430771 CAMTA1Q9Y6Y1 1673 aa14.82□□□□□ -0.04
CHD4-202ENST00000430771 FBLN1P23142 703 aa14.82□□□□□ -0.04
CHD4-202ENST00000430771 MTHFSP49914 203 aa14.82□□□□□ -0.04
CHD4-202ENST00000430771 CHRNA2Q15822 529 aa14.82□□□□□ -0.04
CHD4-202ENST00000430771 IP6K1Q92551 441 aa14.82□□□□□ -0.04
CHD4-202ENST00000430771 C8orf37Q96NL8 207 aa14.82□□□□□ -0.04
CHD4-202ENST00000430771 ERBB3P21860 1342 aa14.8□□□□□ -0.04
CHD4-202ENST00000430771 FAM83GA6ND36 823 aa14.79□□□□□ -0.04
CHD4-202ENST00000430771 RGPD1P0DJD0 1748 aa14.79□□□□□ -0.04
CHD4-202ENST00000430771 NGLY1Q96IV0 654 aa14.79□□□□□ -0.04
CHD4-202ENST00000430771 BTG4Q9NY30 223 aa14.79□□□□□ -0.04
CHD4-202ENST00000430771 WNK3Q9BYP7 1800 aa14.78□□□□□ -0.04
CHD4-202ENST00000430771 CRB1P82279 1406 aa14.77□□□□□ -0.04
CHD4-202ENST00000430771 AFF2P51816 1311 aa14.77□□□□□ -0.04
CHD4-202ENST00000430771 WDR17Q8IZU2 1322 aa14.77□□□□□ -0.04
CHD4-202ENST00000430771 CSB-PGBD3P0DP91 1061 aa14.77□□□□□ -0.05
CHD4-202ENST00000430771 HSP90AB2PQ58FF8 381 aa14.77□□□□□ -0.05
CHD4-202ENST00000430771 FNBP4Q8N3X1 1017 aaPredicted RBP14.77□□□□□ -0.05
CHD4-202ENST00000430771 ANKRD24Q8TF21 1146 aa14.77□□□□□ -0.05
CHD4-202ENST00000430771 RGPD2P0DJD1 1756 aa14.77□□□□□ -0.05
CHD4-202ENST00000430771 AXIN2Q9Y2T1 843 aa14.76□□□□□ -0.05
CHD4-202ENST00000430771 BCL9LQ86UU0 1499 aa14.76□□□□□ -0.05
CHD4-202ENST00000430771 DIAPH1O60610 1272 aaKnown RBP14.75□□□□□ -0.05
CHD4-202ENST00000430771 EVA1CP58658 441 aa14.75□□□□□ -0.05
CHD4-202ENST00000430771 EIF4A2Q14240 407 aaKnown RBP14.75□□□□□ -0.05
CHD4-202ENST00000430771 UNC5CLQ8IV45 518 aa14.75□□□□□ -0.05
CHD4-202ENST00000430771 LTV1Q96GA3 475 aaPredicted RBP14.75□□□□□ -0.05
CHD4-202ENST00000430771 STRN4Q9NRL3 753 aa14.75□□□□□ -0.05
CHD4-202ENST00000430771 USP21Q9UK80 565 aa14.75□□□□□ -0.05
CHD4-202ENST00000430771 NUDCQ9Y266 331 aa14.75□□□□□ -0.05
CHD4-202ENST00000430771 PARP4Q9UKK3 1724 aaKnown RBP14.75□□□□□ -0.05
CHD4-202ENST00000430771 CCER2I3L3R5 266 aa14.74□□□□□ -0.05
CHD4-202ENST00000430771 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
CHD4-202ENST00000430771 MRS2Q9HD23 443 aa14.74□□□□□ -0.05
CHD4-202ENST00000430771 ATRNO75882 1429 aa14.74□□□□□ -0.05
CHD4-202ENST00000430771 NCAPD2Q15021 1401 aa14.74□□□□□ -0.05
CHD4-202ENST00000430771 ZNF772Q68DY9 489 aaPredicted RBP14.73□□□□□ -0.05
CHD4-202ENST00000430771 TOM1L2Q6ZVM7 507 aa14.73□□□□□ -0.05
CHD4-202ENST00000430771 IL13P35225 146 aa14.72□□□□□ -0.05
CHD4-202ENST00000430771 IGSF1Q8N6C5 1336 aa14.71□□□□□ -0.05
CHD4-202ENST00000430771 VPS72Q15906 364 aa14.71□□□□□ -0.05
CHD4-202ENST00000430771 NLRP2Q9NX02 1062 aa14.71□□□□□ -0.05
CHD4-202ENST00000430771 TRPC5Q9UL62 973 aaPredicted RBP14.71□□□□□ -0.05
CHD4-202ENST00000430771 PLEKHG2Q9H7P9 1386 aa14.71□□□□□ -0.06
CHD4-202ENST00000430771 GLI3P10071 1580 aa14.7□□□□□ -0.06
CHD4-202ENST00000430771 U2SURPO15042 1029 aaKnown RBP14.7□□□□□ -0.06
CHD4-202ENST00000430771 WDR43Q15061 677 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHD4-202ENST00000430771 LARP1Q6PKG0 1096 aaKnown RBP14.7□□□□□ -0.06
CHD4-202ENST00000430771 MIER1Q8N108 512 aa14.7□□□□□ -0.06
CHD4-202ENST00000430771 CARD10Q9BWT7 1032 aa14.7□□□□□ -0.06
CHD4-202ENST00000430771 CCDC9Q9Y3X0 531 aaKnown RBP14.7□□□□□ -0.06
CHD4-202ENST00000430771 KDRP35968 1356 aa14.69□□□□□ -0.06
CHD4-202ENST00000430771 SPATA31A1Q5TZJ5 1347 aa14.68□□□□□ -0.06
CHD4-202ENST00000430771 SPATA31A5Q5VU36 1347 aa14.68□□□□□ -0.06
CHD4-202ENST00000430771 SPATA31A7Q8IWB4 1347 aa14.68□□□□□ -0.06
CHD4-202ENST00000430771 EYA1Q99502 592 aa14.68□□□□□ -0.06
CHD4-202ENST00000430771 THRAP3Q9Y2W1 955 aaKnown RBP14.68□□□□□ -0.06
CHD4-202ENST00000430771 PKD1L3Q7Z443 1732 aa14.68□□□□□ -0.06
CHD4-202ENST00000430771 THSD7AQ9UPZ6 1657 aa14.68□□□□□ -0.06
CHD4-202ENST00000430771 LRRC37A3O60309 1634 aa14.67□□□□□ -0.06
CHD4-202ENST00000430771 U2AF1L5P0DN76 240 aaPredicted RBP14.67□□□□□ -0.06
CHD4-202ENST00000430771 U2AF1Q01081 240 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHD4-202ENST00000430771 NBPF6Q5VWK0 638 aa14.67□□□□□ -0.06
CHD4-202ENST00000430771 TCP11L2Q8N4U5 519 aa14.67□□□□□ -0.06
CHD4-202ENST00000430771 NBPF4Q96M43 638 aa14.67□□□□□ -0.06
CHD4-202ENST00000430771 DISP2A7MBM2 1401 aa14.66□□□□□ -0.06
CHD4-202ENST00000430771 USP35Q9P2H5 1018 aa14.66□□□□□ -0.06
CHD4-202ENST00000430771 MEGF6O75095 1541 aa14.66□□□□□ -0.06
CHD4-202ENST00000430771 CCDC184Q52MB2 194 aa14.65□□□□□ -0.06
CHD4-202ENST00000430771 SULT6B1Q6IMI4 303 aa14.65□□□□□ -0.06
CHD4-202ENST00000430771 USHBP1Q8N6Y0 703 aa14.65□□□□□ -0.06
CHD4-202ENST00000430771 RAPGEF4Q8WZA2 1011 aa14.65□□□□□ -0.06
CHD4-202ENST00000430771 CDCA7Q9BWT1 371 aaPredicted RBP14.65□□□□□ -0.06
CHD4-202ENST00000430771 PNNQ9H307 717 aaKnown RBP14.65□□□□□ -0.06
CHD4-202ENST00000430771 OVOS2A0A0G2JMS6 1433 aa14.65□□□□□ -0.06
CHD4-202ENST00000430771 NEFMP07197 916 aa14.64□□□□□ -0.07
CHD4-202ENST00000430771 IL2RBP14784 551 aa14.64□□□□□ -0.07
CHD4-202ENST00000430771 BARGINQ6ZT62 677 aa14.64□□□□□ -0.07
CHD4-202ENST00000430771 GJD4Q96KN9 370 aaPredicted RBP14.64□□□□□ -0.07
CHD4-202ENST00000430771 QTRT2Q9H974 415 aaKnown RBP14.64□□□□□ -0.07
CHD4-202ENST00000430771 RGS17Q9UGC6 210 aaPredicted RBP14.64□□□□□ -0.07
CHD4-202ENST00000430771 TNS2Q63HR2 1409 aa14.64□□□□□ -0.07
CHD4-202ENST00000430771 HMOX1P09601 288 aa14.63□□□□□ -0.07
CHD4-202ENST00000430771 TATP17735 454 aaPredicted RBP14.63□□□□□ -0.07
CHD4-202ENST00000430771 AEBP1Q8IUX7 1158 aa14.63□□□□□ -0.07
CHD4-202ENST00000430771 SHANK3Q9BYB0 1731 aa14.63□□□□□ -0.07
CHD4-202ENST00000430771 FCHSD2O94868 740 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms