RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 AXIN2Q9Y2T1 843 aa29.67■■■□□ 2.34
SEC22C-207ENST00000423701 VPS72Q15906 364 aa29.65■■■□□ 2.34
SEC22C-207ENST00000423701 STRN4Q9NRL3 753 aa29.65■■■□□ 2.34
SEC22C-207ENST00000423701 GLI3P10071 1580 aa29.64■■■□□ 2.34
SEC22C-207ENST00000423701 RRS1Q15050 365 aaKnown RBP29.64■■■□□ 2.34
SEC22C-207ENST00000423701 NPC1L1Q9UHC9 1359 aa29.62■■■□□ 2.33
SEC22C-207ENST00000423701 RXRBP28702 533 aa29.61■■■□□ 2.33
SEC22C-207ENST00000423701 RBM6P78332 1123 aaKnown RBP29.61■■■□□ 2.33
SEC22C-207ENST00000423701 GJD4Q96KN9 370 aaPredicted RBP29.61■■■□□ 2.33
SEC22C-207ENST00000423701 PEAK1Q9H792 1746 aa29.61■■■□□ 2.33
SEC22C-207ENST00000423701 EVA1CP58658 441 aa29.61■■■□□ 2.33
SEC22C-207ENST00000423701 RTL1A6NKG5 1358 aa29.6■■■□□ 2.33
SEC22C-207ENST00000423701 BLMP54132 1417 aaPredicted RBP29.6■■■□□ 2.33
SEC22C-207ENST00000423701 TNNT2P45379 298 aaPredicted RBP29.6■■■□□ 2.33
SEC22C-207ENST00000423701 CC2D1BQ5T0F9 858 aaKnown RBP29.6■■■□□ 2.33
SEC22C-207ENST00000423701 MORC1Q86VD1 984 aa29.6■■■□□ 2.33
SEC22C-207ENST00000423701 CCDC9Q9Y3X0 531 aaKnown RBP29.6■■■□□ 2.33
SEC22C-207ENST00000423701 AMPHP49418 695 aa29.58■■■□□ 2.33
SEC22C-207ENST00000423701 LARP1Q6PKG0 1096 aaKnown RBP29.58■■■□□ 2.33
SEC22C-207ENST00000423701 IP6K1Q92551 441 aa29.58■■■□□ 2.33
SEC22C-207ENST00000423701 MAP2P11137 1827 aaKnown RBP29.58■■■□□ 2.33
SEC22C-207ENST00000423701 ZNF316A6NFI3 1004 aaPredicted RBP29.57■■■□□ 2.32
SEC22C-207ENST00000423701 HOXC9P31274 260 aa29.57■■■□□ 2.32
SEC22C-207ENST00000423701 DDX10Q13206 875 aaKnown RBP29.57■■■□□ 2.32
SEC22C-207ENST00000423701 ILDR2Q71H61 639 aa29.57■■■□□ 2.32
SEC22C-207ENST00000423701 SPATA31A5Q5VU36 1347 aa29.57■■■□□ 2.32
SEC22C-207ENST00000423701 SPATA31A7Q8IWB4 1347 aa29.57■■■□□ 2.32
SEC22C-207ENST00000423701 EMILIN1Q9Y6C2 1016 aa29.56■■■□□ 2.32
SEC22C-207ENST00000423701 CDK12Q9NYV4 1490 aaPredicted RBP29.56■■■□□ 2.32
SEC22C-207ENST00000423701 ERBB3P21860 1342 aa29.55■■■□□ 2.32
SEC22C-207ENST00000423701 WDR17Q8IZU2 1322 aa29.55■■■□□ 2.32
SEC22C-207ENST00000423701 KIF24Q5T7B8 1368 aa29.55■■■□□ 2.32
SEC22C-207ENST00000423701 CRB1P82279 1406 aa29.55■■■□□ 2.32
SEC22C-207ENST00000423701 SPATA31A1Q5TZJ5 1347 aa29.55■■■□□ 2.32
SEC22C-207ENST00000423701 FLT4P35916 1363 aa29.54■■■□□ 2.32
SEC22C-207ENST00000423701 RGS12O14924 1447 aa29.54■■■□□ 2.32
SEC22C-207ENST00000423701 CNGB1Q14028 1251 aaPredicted RBP29.54■■■□□ 2.32
SEC22C-207ENST00000423701 POLKQ9UBT6 870 aa29.53■■■□□ 2.32
SEC22C-207ENST00000423701 SMG6Q86US8 1419 aaKnown RBP29.52■■■□□ 2.32
SEC22C-207ENST00000423701 CSB-PGBD3P0DP91 1061 aa29.51■■■□□ 2.31
SEC22C-207ENST00000423701 ANKRD24Q8TF21 1146 aa29.51■■■□□ 2.31
SEC22C-207ENST00000423701 FAM208AQ9UK61 1670 aaKnown RBP29.5■■■□□ 2.31
SEC22C-207ENST00000423701 TOM1L2Q6ZVM7 507 aa29.5■■■□□ 2.31
SEC22C-207ENST00000423701 USP35Q9P2H5 1018 aa29.5■■■□□ 2.31
SEC22C-207ENST00000423701 PPM1GO15355 546 aaPredicted RBP29.49■■■□□ 2.31
SEC22C-207ENST00000423701 INSRP06213 1382 aa29.49■■■□□ 2.31
SEC22C-207ENST00000423701 HSP90AB2PQ58FF8 381 aa29.48■■■□□ 2.31
SEC22C-207ENST00000423701 LTV1Q96GA3 475 aaPredicted RBP29.48■■■□□ 2.31
SEC22C-207ENST00000423701 FAM98CQ17RN3 349 aaKnown RBP29.47■■■□□ 2.31
SEC22C-207ENST00000423701 THSD7AQ9UPZ6 1657 aa29.46■■■□□ 2.31
SEC22C-207ENST00000423701 TCP11L2Q8N4U5 519 aa29.45■■■□□ 2.31
SEC22C-207ENST00000423701 ONECUT3O60422 494 aaPredicted RBP29.44■■■□□ 2.3
SEC22C-207ENST00000423701 CARD10Q9BWT7 1032 aa29.44■■■□□ 2.3
SEC22C-207ENST00000423701 WNK3Q9BYP7 1800 aa29.44■■■□□ 2.3
SEC22C-207ENST00000423701 THRAP3Q9Y2W1 955 aaKnown RBP29.43■■■□□ 2.3
SEC22C-207ENST00000423701 RGPD2P0DJD1 1756 aa29.43■■■□□ 2.3
SEC22C-207ENST00000423701 BARGINQ6ZT62 677 aa29.42■■■□□ 2.3
SEC22C-207ENST00000423701 NLRP2Q9NX02 1062 aa29.42■■■□□ 2.3
SEC22C-207ENST00000423701 SEPT12Q8IYM1 358 aa29.4■■■□□ 2.3
SEC22C-207ENST00000423701 A0A0G2JS52 829 aa29.39■■■□□ 2.3
SEC22C-207ENST00000423701 MYT1Q01538 1121 aa29.39■■■□□ 2.3
SEC22C-207ENST00000423701 BRWD3Q6RI45 1802 aa29.39■■■□□ 2.29
SEC22C-207ENST00000423701 PARD3Q8TEW0 1356 aa29.38■■■□□ 2.29
SEC22C-207ENST00000423701 MTHFSP49914 203 aa29.37■■■□□ 2.29
SEC22C-207ENST00000423701 PARP4Q9UKK3 1724 aaKnown RBP29.36■■■□□ 2.29
SEC22C-207ENST00000423701 DISP2A7MBM2 1401 aa29.36■■■□□ 2.29
SEC22C-207ENST00000423701 LRRC37A3O60309 1634 aa29.34■■■□□ 2.29
SEC22C-207ENST00000423701 EIF4A2Q14240 407 aaKnown RBP29.34■■■□□ 2.29
SEC22C-207ENST00000423701 NBPF6Q5VWK0 638 aa29.34■■■□□ 2.29
SEC22C-207ENST00000423701 NBPF4Q96M43 638 aa29.34■■■□□ 2.29
SEC22C-207ENST00000423701 PPP2R1AP30153 589 aa29.31■■■□□ 2.28
SEC22C-207ENST00000423701 USHBP1Q8N6Y0 703 aa29.3■■■□□ 2.28
SEC22C-207ENST00000423701 NCAPD2Q15021 1401 aa29.3■■■□□ 2.28
SEC22C-207ENST00000423701 CDCA7Q9BWT1 371 aaPredicted RBP29.29■■■□□ 2.28
SEC22C-207ENST00000423701 COL3A1P02461 1466 aaPredicted RBP29.28■■■□□ 2.28
SEC22C-207ENST00000423701 EYA1Q99502 592 aa29.28■■■□□ 2.28
SEC22C-207ENST00000423701 IL2RBP14784 551 aa29.27■■■□□ 2.28
SEC22C-207ENST00000423701 KRT27Q7Z3Y8 459 aa29.27■■■□□ 2.28
SEC22C-207ENST00000423701 RGPD1P0DJD0 1748 aa29.26■■■□□ 2.27
SEC22C-207ENST00000423701 RALBP1Q15311 655 aa29.26■■■□□ 2.27
SEC22C-207ENST00000423701 MEGF6O75095 1541 aa29.25■■■□□ 2.27
SEC22C-207ENST00000423701 IL13P35225 146 aa29.24■■■□□ 2.27
SEC22C-207ENST00000423701 TNS2Q63HR2 1409 aa29.24■■■□□ 2.27
SEC22C-207ENST00000423701 IGSF1Q8N6C5 1336 aa29.24■■■□□ 2.27
SEC22C-207ENST00000423701 DDB1Q16531 1140 aa29.23■■■□□ 2.27
SEC22C-207ENST00000423701 EP400Q96L91 3159 aa29.22■■■□□ 2.27
SEC22C-207ENST00000423701 OVOS2A0A0G2JMS6 1433 aa29.2■■■□□ 2.27
SEC22C-207ENST00000423701 DIAPH1O60610 1272 aaKnown RBP29.2■■■□□ 2.26
SEC22C-207ENST00000423701 PDE3BQ13370 1112 aa29.2■■■□□ 2.26
SEC22C-207ENST00000423701 CFAP53Q96M91 514 aa29.19■■■□□ 2.26
SEC22C-207ENST00000423701 PRKRIP1Q9H875 184 aaPredicted RBP29.19■■■□□ 2.26
SEC22C-207ENST00000423701 FAM182BQ5T319 152 aa29.18■■■□□ 2.26
SEC22C-207ENST00000423701 RAPGEF4Q8WZA2 1011 aa29.18■■■□□ 2.26
SEC22C-207ENST00000423701 EXOC5O00471 708 aa29.17■■■□□ 2.26
SEC22C-207ENST00000423701 MYBBP1AQ9BQG0 1328 aaKnown RBP29.17■■■□□ 2.26
SEC22C-207ENST00000423701 SHANK3Q9BYB0 1731 aa29.17■■■□□ 2.26
SEC22C-207ENST00000423701 TATP17735 454 aaPredicted RBP29.15■■■□□ 2.26
SEC22C-207ENST00000423701 PKD1L3Q7Z443 1732 aa29.14■■■□□ 2.26
SEC22C-207ENST00000423701 AEBP1Q8IUX7 1158 aa29.14■■■□□ 2.26
SEC22C-207ENST00000423701 KDRP35968 1356 aa29.14■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms