RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 COL14A1Q05707 1796 aaKnown RBP13.44□□□□□ -0.26
HDLBP-209ENST00000422933 EP400Q96L91 3159 aa13.44□□□□□ -0.26
HDLBP-209ENST00000422933 RRS1Q15050 365 aaKnown RBP13.43□□□□□ -0.26
HDLBP-209ENST00000422933 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
HDLBP-209ENST00000422933 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
HDLBP-209ENST00000422933 BRWD3Q6RI45 1802 aa13.42□□□□□ -0.26
HDLBP-209ENST00000422933 FAM83GA6ND36 823 aa13.42□□□□□ -0.26
HDLBP-209ENST00000422933 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
HDLBP-209ENST00000422933 CHRNA2Q15822 529 aa13.42□□□□□ -0.26
HDLBP-209ENST00000422933 IP6K1Q92551 441 aa13.42□□□□□ -0.26
HDLBP-209ENST00000422933 MAP3K19Q56UN5 1328 aa13.41□□□□□ -0.26
HDLBP-209ENST00000422933 MYBBP1AQ9BQG0 1328 aaKnown RBP13.41□□□□□ -0.26
HDLBP-209ENST00000422933 ATRNO75882 1429 aa13.41□□□□□ -0.26
HDLBP-209ENST00000422933 NFAT5O94916 1531 aa13.41□□□□□ -0.26
HDLBP-209ENST00000422933 PRKRIP1Q9H875 184 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-209ENST00000422933 BTG4Q9NY30 223 aa13.41□□□□□ -0.26
HDLBP-209ENST00000422933 FLT4P35916 1363 aa13.41□□□□□ -0.26
HDLBP-209ENST00000422933 PARD3Q8TEW0 1356 aa13.41□□□□□ -0.26
HDLBP-209ENST00000422933 BLMP54132 1417 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-209ENST00000422933 ABCC6O95255 1503 aa13.4□□□□□ -0.26
HDLBP-209ENST00000422933 MTHFSP49914 203 aa13.4□□□□□ -0.26
HDLBP-209ENST00000422933 POLKQ9UBT6 870 aa13.4□□□□□ -0.26
HDLBP-209ENST00000422933 USP21Q9UK80 565 aa13.4□□□□□ -0.26
HDLBP-209ENST00000422933 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
HDLBP-209ENST00000422933 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.26
HDLBP-209ENST00000422933 NWD2Q9ULI1 1742 aa13.39□□□□□ -0.27
HDLBP-209ENST00000422933 FBLN1P23142 703 aa13.39□□□□□ -0.27
HDLBP-209ENST00000422933 PPP2R1AP30153 589 aa13.39□□□□□ -0.27
HDLBP-209ENST00000422933 HOXC9P31274 260 aa13.39□□□□□ -0.27
HDLBP-209ENST00000422933 STRN4Q9NRL3 753 aa13.39□□□□□ -0.27
HDLBP-209ENST00000422933 NUDCQ9Y266 331 aa13.39□□□□□ -0.27
HDLBP-209ENST00000422933 EMILIN1Q9Y6C2 1016 aa13.39□□□□□ -0.27
HDLBP-209ENST00000422933 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
HDLBP-209ENST00000422933 GLI3P10071 1580 aa13.38□□□□□ -0.27
HDLBP-209ENST00000422933 UNC5CLQ8IV45 518 aa13.38□□□□□ -0.27
HDLBP-209ENST00000422933 FNBP4Q8N3X1 1017 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-209ENST00000422933 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
HDLBP-209ENST00000422933 INSRP06213 1382 aa13.37□□□□□ -0.27
HDLBP-209ENST00000422933 TOM1L2Q6ZVM7 507 aa13.37□□□□□ -0.27
HDLBP-209ENST00000422933 ANKRD24Q8TF21 1146 aa13.37□□□□□ -0.27
HDLBP-209ENST00000422933 LTV1Q96GA3 475 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-209ENST00000422933 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-209ENST00000422933 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
HDLBP-209ENST00000422933 DIAPH1O60610 1272 aaKnown RBP13.36□□□□□ -0.27
HDLBP-209ENST00000422933 HSP90AB2PQ58FF8 381 aa13.35□□□□□ -0.27
HDLBP-209ENST00000422933 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
HDLBP-209ENST00000422933 WDR17Q8IZU2 1322 aa13.35□□□□□ -0.27
HDLBP-209ENST00000422933 FAM208AQ9UK61 1670 aaKnown RBP13.34□□□□□ -0.27
HDLBP-209ENST00000422933 SLIT2O94813 1529 aa13.34□□□□□ -0.27
HDLBP-209ENST00000422933 NEFMP07197 916 aa13.34□□□□□ -0.27
HDLBP-209ENST00000422933 AXIN2Q9Y2T1 843 aa13.34□□□□□ -0.27
HDLBP-209ENST00000422933 COL18A1P39060 1754 aa13.34□□□□□ -0.27
HDLBP-209ENST00000422933 ERBB3P21860 1342 aa13.34□□□□□ -0.27
HDLBP-209ENST00000422933 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
HDLBP-209ENST00000422933 VPS72Q15906 364 aa13.33□□□□□ -0.28
HDLBP-209ENST00000422933 PNNQ9H307 717 aaKnown RBP13.33□□□□□ -0.28
HDLBP-209ENST00000422933 LMO7Q8WWI1 1683 aa13.33□□□□□ -0.28
HDLBP-209ENST00000422933 CRB1P82279 1406 aa13.32□□□□□ -0.28
HDLBP-209ENST00000422933 COL5A2P05997 1499 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-209ENST00000422933 U2SURPO15042 1029 aaKnown RBP13.32□□□□□ -0.28
HDLBP-209ENST00000422933 WDR43Q15061 677 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDLBP-209ENST00000422933 THRAP3Q9Y2W1 955 aaKnown RBP13.32□□□□□ -0.28
HDLBP-209ENST00000422933 EIF4A2Q14240 407 aaKnown RBP13.31□□□□□ -0.28
HDLBP-209ENST00000422933 LARP1Q6PKG0 1096 aaKnown RBP13.31□□□□□ -0.28
HDLBP-209ENST00000422933 CARD10Q9BWT7 1032 aa13.31□□□□□ -0.28
HDLBP-209ENST00000422933 USP35Q9P2H5 1018 aa13.31□□□□□ -0.28
HDLBP-209ENST00000422933 PEAK1Q9H792 1746 aa13.3□□□□□ -0.28
HDLBP-209ENST00000422933 A0A0G2JS52 829 aa13.3□□□□□ -0.28
HDLBP-209ENST00000422933 MYT1Q01538 1121 aa13.3□□□□□ -0.28
HDLBP-209ENST00000422933 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
HDLBP-209ENST00000422933 RAPGEF4Q8WZA2 1011 aa13.3□□□□□ -0.28
HDLBP-209ENST00000422933 CDCA7Q9BWT1 371 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-209ENST00000422933 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
HDLBP-209ENST00000422933 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-209ENST00000422933 NRAPQ86VF7 1730 aa13.29□□□□□ -0.28
HDLBP-209ENST00000422933 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
HDLBP-209ENST00000422933 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-209ENST00000422933 TATP17735 454 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-209ENST00000422933 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDLBP-209ENST00000422933 SPATA31A1Q5TZJ5 1347 aa13.28□□□□□ -0.28
HDLBP-209ENST00000422933 SPATA31A5Q5VU36 1347 aa13.28□□□□□ -0.28
HDLBP-209ENST00000422933 SPATA31A7Q8IWB4 1347 aa13.28□□□□□ -0.28
HDLBP-209ENST00000422933 IL13P35225 146 aa13.27□□□□□ -0.29
HDLBP-209ENST00000422933 EYA1Q99502 592 aa13.27□□□□□ -0.29
HDLBP-209ENST00000422933 IL2RBP14784 551 aa13.26□□□□□ -0.29
HDLBP-209ENST00000422933 NBPF6Q5VWK0 638 aa13.26□□□□□ -0.29
HDLBP-209ENST00000422933 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
HDLBP-209ENST00000422933 BARGINQ6ZT62 677 aa13.26□□□□□ -0.29
HDLBP-209ENST00000422933 NBPF4Q96M43 638 aa13.26□□□□□ -0.29
HDLBP-209ENST00000422933 RGPD2P0DJD1 1756 aa13.25□□□□□ -0.29
HDLBP-209ENST00000422933 IGSF1Q8N6C5 1336 aa13.25□□□□□ -0.29
HDLBP-209ENST00000422933 EXOC5O00471 708 aa13.24□□□□□ -0.29
HDLBP-209ENST00000422933 FCHSD2O94868 740 aa13.24□□□□□ -0.29
HDLBP-209ENST00000422933 FAM98CQ17RN3 349 aaKnown RBP13.24□□□□□ -0.29
HDLBP-209ENST00000422933 DEFB132Q7Z7B7 95 aa13.24□□□□□ -0.29
HDLBP-209ENST00000422933 MIER1Q8N108 512 aa13.24□□□□□ -0.29
HDLBP-209ENST00000422933 USHBP1Q8N6Y0 703 aa13.24□□□□□ -0.29
HDLBP-209ENST00000422933 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
HDLBP-209ENST00000422933 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
HDLBP-209ENST00000422933 HMOX1P09601 288 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms