RNA–Protein interactions for RNA: ENST00000420724.1

AC007389.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007389.3, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007389.3-201ENST00000420724 HOXC9P31274 260 aa17.88■□□□□ 0.45
AC007389.3-201ENST00000420724 MTHFSP49914 203 aa17.88■□□□□ 0.45
AC007389.3-201ENST00000420724 RTL1A6NKG5 1358 aa17.88■□□□□ 0.45
AC007389.3-201ENST00000420724 SLIT2O94813 1529 aa17.88■□□□□ 0.45
AC007389.3-201ENST00000420724 IP6K1Q92551 441 aa17.87■□□□□ 0.45
AC007389.3-201ENST00000420724 C8orf37Q96NL8 207 aa17.87■□□□□ 0.45
AC007389.3-201ENST00000420724 FLT4P35916 1363 aa17.87■□□□□ 0.45
AC007389.3-201ENST00000420724 KIF24Q5T7B8 1368 aa17.87■□□□□ 0.45
AC007389.3-201ENST00000420724 CDK12Q9NYV4 1490 aaPredicted RBP17.87■□□□□ 0.45
AC007389.3-201ENST00000420724 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
AC007389.3-201ENST00000420724 AMPHP49418 695 aa17.87■□□□□ 0.45
AC007389.3-201ENST00000420724 HSP90AB2PQ58FF8 381 aa17.87■□□□□ 0.45
AC007389.3-201ENST00000420724 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
AC007389.3-201ENST00000420724 MYBBP1AQ9BQG0 1328 aaKnown RBP17.86■□□□□ 0.45
AC007389.3-201ENST00000420724 RGPD5Q99666 1765 aa17.86■□□□□ 0.45
AC007389.3-201ENST00000420724 CENPBP07199 599 aaPredicted RBP17.86■□□□□ 0.45
AC007389.3-201ENST00000420724 MEX3CQ5U5Q3 659 aaKnown RBP17.85■□□□□ 0.45
AC007389.3-201ENST00000420724 COL3A1P02461 1466 aaPredicted RBP17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 COL5A2P05997 1499 aaPredicted RBP17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 BLMP54132 1417 aaPredicted RBP17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 FNBP4Q8N3X1 1017 aaPredicted RBP17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 NGLY1Q96IV0 654 aa17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 BTG4Q9NY30 223 aa17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 NRAPQ86VF7 1730 aa17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 BCL9LQ86UU0 1499 aa17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 INSRP06213 1382 aa17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 NWD2Q9ULI1 1742 aa17.84■□□□□ 0.45
AC007389.3-201ENST00000420724 ERBB3P21860 1342 aa17.81■□□□□ 0.44
AC007389.3-201ENST00000420724 AFF2P51816 1311 aa17.81■□□□□ 0.44
AC007389.3-201ENST00000420724 CCDC184Q52MB2 194 aa17.8■□□□□ 0.44
AC007389.3-201ENST00000420724 ANKRD24Q8TF21 1146 aa17.8■□□□□ 0.44
AC007389.3-201ENST00000420724 EIF4A2Q14240 407 aaKnown RBP17.79■□□□□ 0.44
AC007389.3-201ENST00000420724 LTV1Q96GA3 475 aaPredicted RBP17.79■□□□□ 0.44
AC007389.3-201ENST00000420724 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
AC007389.3-201ENST00000420724 UNC5CLQ8IV45 518 aa17.78■□□□□ 0.44
AC007389.3-201ENST00000420724 STRN4Q9NRL3 753 aa17.78■□□□□ 0.44
AC007389.3-201ENST00000420724 USP21Q9UK80 565 aa17.78■□□□□ 0.44
AC007389.3-201ENST00000420724 WDR17Q8IZU2 1322 aa17.78■□□□□ 0.44
AC007389.3-201ENST00000420724 LARP1Q6PKG0 1096 aaKnown RBP17.77■□□□□ 0.44
AC007389.3-201ENST00000420724 IL13P35225 146 aa17.77■□□□□ 0.43
AC007389.3-201ENST00000420724 RGPD2P0DJD1 1756 aa17.76■□□□□ 0.43
AC007389.3-201ENST00000420724 RGS17Q9UGC6 210 aaPredicted RBP17.76■□□□□ 0.43
AC007389.3-201ENST00000420724 EVA1CP58658 441 aa17.75■□□□□ 0.43
AC007389.3-201ENST00000420724 CFAP53Q96M91 514 aa17.75■□□□□ 0.43
AC007389.3-201ENST00000420724 RGPD1P0DJD0 1748 aa17.75■□□□□ 0.43
AC007389.3-201ENST00000420724 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
AC007389.3-201ENST00000420724 NBPF6Q5VWK0 638 aa17.74■□□□□ 0.43
AC007389.3-201ENST00000420724 NBPF4Q96M43 638 aa17.74■□□□□ 0.43
AC007389.3-201ENST00000420724 ATRNO75882 1429 aa17.74■□□□□ 0.43
AC007389.3-201ENST00000420724 CRB1P82279 1406 aa17.74■□□□□ 0.43
AC007389.3-201ENST00000420724 FAM208AQ9UK61 1670 aaKnown RBP17.74■□□□□ 0.43
AC007389.3-201ENST00000420724 CSB-PGBD3P0DP91 1061 aa17.74■□□□□ 0.43
AC007389.3-201ENST00000420724 EYA1Q99502 592 aa17.74■□□□□ 0.43
AC007389.3-201ENST00000420724 NCAPD2Q15021 1401 aa17.73■□□□□ 0.43
AC007389.3-201ENST00000420724 VPS72Q15906 364 aa17.73■□□□□ 0.43
AC007389.3-201ENST00000420724 TOM1L2Q6ZVM7 507 aa17.72■□□□□ 0.43
AC007389.3-201ENST00000420724 NLRP2Q9NX02 1062 aa17.72■□□□□ 0.43
AC007389.3-201ENST00000420724 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
AC007389.3-201ENST00000420724 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
AC007389.3-201ENST00000420724 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
AC007389.3-201ENST00000420724 USHBP1Q8N6Y0 703 aa17.71■□□□□ 0.43
AC007389.3-201ENST00000420724 SPATA31A1Q5TZJ5 1347 aa17.71■□□□□ 0.43
AC007389.3-201ENST00000420724 CARD10Q9BWT7 1032 aa17.71■□□□□ 0.42
AC007389.3-201ENST00000420724 GLI3P10071 1580 aa17.7■□□□□ 0.42
AC007389.3-201ENST00000420724 ZNF772Q68DY9 489 aaPredicted RBP17.7■□□□□ 0.42
AC007389.3-201ENST00000420724 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
AC007389.3-201ENST00000420724 TRPC5Q9UL62 973 aaPredicted RBP17.7■□□□□ 0.42
AC007389.3-201ENST00000420724 AEBP1Q8IUX7 1158 aa17.69■□□□□ 0.42
AC007389.3-201ENST00000420724 QTRT2Q9H974 415 aaKnown RBP17.69■□□□□ 0.42
AC007389.3-201ENST00000420724 USP35Q9P2H5 1018 aa17.69■□□□□ 0.42
AC007389.3-201ENST00000420724 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
AC007389.3-201ENST00000420724 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
AC007389.3-201ENST00000420724 KDRP35968 1356 aa17.68■□□□□ 0.42
AC007389.3-201ENST00000420724 GJD4Q96KN9 370 aaPredicted RBP17.67■□□□□ 0.42
AC007389.3-201ENST00000420724 CCDC9Q9Y3X0 531 aaKnown RBP17.67■□□□□ 0.42
AC007389.3-201ENST00000420724 POTEAQ6S8J7 498 aa17.67■□□□□ 0.42
AC007389.3-201ENST00000420724 DISP2A7MBM2 1401 aa17.66■□□□□ 0.42
AC007389.3-201ENST00000420724 SULT6B1Q6IMI4 303 aa17.66■□□□□ 0.42
AC007389.3-201ENST00000420724 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
AC007389.3-201ENST00000420724 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
AC007389.3-201ENST00000420724 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
AC007389.3-201ENST00000420724 MEGF6O75095 1541 aa17.65■□□□□ 0.42
AC007389.3-201ENST00000420724 HMOX1P09601 288 aa17.65■□□□□ 0.42
AC007389.3-201ENST00000420724 WNK3Q9BYP7 1800 aa17.65■□□□□ 0.42
AC007389.3-201ENST00000420724 U2AF1L5P0DN76 240 aaPredicted RBP17.64■□□□□ 0.42
AC007389.3-201ENST00000420724 U2AF1Q01081 240 aaKnown RBP eCLIP17.64■□□□□ 0.42
AC007389.3-201ENST00000420724 BARGINQ6ZT62 677 aa17.64■□□□□ 0.41
AC007389.3-201ENST00000420724 THRAP3Q9Y2W1 955 aaKnown RBP17.64■□□□□ 0.41
AC007389.3-201ENST00000420724 RSPH6AQ9H0K4 717 aa17.63■□□□□ 0.41
AC007389.3-201ENST00000420724 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
AC007389.3-201ENST00000420724 ADAMTS8Q9UP79 889 aa17.62■□□□□ 0.41
AC007389.3-201ENST00000420724 THSD7AQ9UPZ6 1657 aa17.62■□□□□ 0.41
AC007389.3-201ENST00000420724 RBM6P78332 1123 aaKnown RBP17.61■□□□□ 0.41
AC007389.3-201ENST00000420724 ONECUT3O60422 494 aaPredicted RBP17.61■□□□□ 0.41
AC007389.3-201ENST00000420724 IL2RBP14784 551 aa17.61■□□□□ 0.41
AC007389.3-201ENST00000420724 WDR43Q15061 677 aaKnown RBP eCLIP17.61■□□□□ 0.41
AC007389.3-201ENST00000420724 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
AC007389.3-201ENST00000420724 FCHSD2O94868 740 aa17.6■□□□□ 0.41
AC007389.3-201ENST00000420724 PARP4Q9UKK3 1724 aaKnown RBP17.59■□□□□ 0.41
AC007389.3-201ENST00000420724 PRKAR2BP31323 418 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms