RNA–Protein interactions for RNA: ENST00000420724.1

AC007389.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007389.3, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007389.3-201ENST00000420724 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
AC007389.3-201ENST00000420724 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
AC007389.3-201ENST00000420724 ABCC9O60706 1549 aa26.8■■□□□ 1.88
AC007389.3-201ENST00000420724 ZCCHC6Q5VYS8 1495 aaKnown RBP26.31■■□□□ 1.8
AC007389.3-201ENST00000420724 DCAF8L2P0C7V8 631 aa26.06■■□□□ 1.76
AC007389.3-201ENST00000420724 DCAF1Q9Y4B6 1507 aa26.03■■□□□ 1.76
AC007389.3-201ENST00000420724 NACADO15069 1562 aa25.99■■□□□ 1.75
AC007389.3-201ENST00000420724 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
AC007389.3-201ENST00000420724 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
AC007389.3-201ENST00000420724 SCRIBQ14160 1630 aa25.39■■□□□ 1.66
AC007389.3-201ENST00000420724 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.65
AC007389.3-201ENST00000420724 BICRAQ9NZM4 1560 aa25.2■■□□□ 1.62
AC007389.3-201ENST00000420724 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
AC007389.3-201ENST00000420724 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
AC007389.3-201ENST00000420724 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
AC007389.3-201ENST00000420724 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
AC007389.3-201ENST00000420724 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.49
AC007389.3-201ENST00000420724 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
AC007389.3-201ENST00000420724 DNAJC5BQ9UF47 199 aa24.28■■□□□ 1.48
AC007389.3-201ENST00000420724 MROH2BQ7Z745 1585 aa24.28■■□□□ 1.48
AC007389.3-201ENST00000420724 CC2D2AQ9P2K1 1620 aa24.26■■□□□ 1.47
AC007389.3-201ENST00000420724 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.46
AC007389.3-201ENST00000420724 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
AC007389.3-201ENST00000420724 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
AC007389.3-201ENST00000420724 SMARCA2P51531 1590 aa24.04■■□□□ 1.44
AC007389.3-201ENST00000420724 WIZO95785 1651 aa24.03■■□□□ 1.44
AC007389.3-201ENST00000420724 NCAPD3P42695 1498 aa24■■□□□ 1.43
AC007389.3-201ENST00000420724 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
AC007389.3-201ENST00000420724 BAZ1BQ9UIG0 1483 aaKnown RBP23.89■■□□□ 1.42
AC007389.3-201ENST00000420724 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
AC007389.3-201ENST00000420724 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
AC007389.3-201ENST00000420724 CCDC88BA6NC98 1476 aa23.51■■□□□ 1.35
AC007389.3-201ENST00000420724 NESP48681 1621 aa23.34■■□□□ 1.33
AC007389.3-201ENST00000420724 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
AC007389.3-201ENST00000420724 CFTRP13569 1480 aa23.29■■□□□ 1.32
AC007389.3-201ENST00000420724 LAMC3Q9Y6N6 1575 aa23.28■■□□□ 1.32
AC007389.3-201ENST00000420724 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
AC007389.3-201ENST00000420724 PDS5BQ9NTI5 1447 aa23.1■■□□□ 1.29
AC007389.3-201ENST00000420724 FANCD2Q9BXW9 1451 aa23.06■■□□□ 1.28
AC007389.3-201ENST00000420724 KIF21AQ7Z4S6 1674 aa23.05■■□□□ 1.28
AC007389.3-201ENST00000420724 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
AC007389.3-201ENST00000420724 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
AC007389.3-201ENST00000420724 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.25
AC007389.3-201ENST00000420724 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
AC007389.3-201ENST00000420724 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.25
AC007389.3-201ENST00000420724 WDR62O43379 1518 aa22.8■■□□□ 1.24
AC007389.3-201ENST00000420724 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
AC007389.3-201ENST00000420724 CUX1P39880 1505 aa22.75■■□□□ 1.23
AC007389.3-201ENST00000420724 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
AC007389.3-201ENST00000420724 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
AC007389.3-201ENST00000420724 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
AC007389.3-201ENST00000420724 SYNJ1O43426 1573 aa22.68■■□□□ 1.22
AC007389.3-201ENST00000420724 TOP2BQ02880 1626 aa22.64■■□□□ 1.21
AC007389.3-201ENST00000420724 CUX2O14529 1486 aa22.63■■□□□ 1.21
AC007389.3-201ENST00000420724 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
AC007389.3-201ENST00000420724 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
AC007389.3-201ENST00000420724 FGD5Q6ZNL6 1462 aa22.59■■□□□ 1.21
AC007389.3-201ENST00000420724 RAD54L2Q9Y4B4 1467 aa22.5■■□□□ 1.19
AC007389.3-201ENST00000420724 TARBP1Q13395 1621 aaKnown RBP22.48■■□□□ 1.19
AC007389.3-201ENST00000420724 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
AC007389.3-201ENST00000420724 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
AC007389.3-201ENST00000420724 SOGA1O94964 1423 aa22.47■■□□□ 1.19
AC007389.3-201ENST00000420724 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
AC007389.3-201ENST00000420724 ZNF608Q9ULD9 1512 aaPredicted RBP22.4■■□□□ 1.18
AC007389.3-201ENST00000420724 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
AC007389.3-201ENST00000420724 ABCA10Q8WWZ4 1543 aa22.38■■□□□ 1.17
AC007389.3-201ENST00000420724 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.16
AC007389.3-201ENST00000420724 EIF4G3O43432 1585 aaKnown RBP22.3■■□□□ 1.16
AC007389.3-201ENST00000420724 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.16
AC007389.3-201ENST00000420724 ABCA5Q8WWZ7 1642 aa22.27■■□□□ 1.16
AC007389.3-201ENST00000420724 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
AC007389.3-201ENST00000420724 RUSC2Q8N2Y8 1516 aa22.2■■□□□ 1.14
AC007389.3-201ENST00000420724 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
AC007389.3-201ENST00000420724 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
AC007389.3-201ENST00000420724 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
AC007389.3-201ENST00000420724 ERICH3Q5RHP9 1530 aa22.1■■□□□ 1.13
AC007389.3-201ENST00000420724 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
AC007389.3-201ENST00000420724 IGF1RP08069 1367 aa22.09■■□□□ 1.13
AC007389.3-201ENST00000420724 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
AC007389.3-201ENST00000420724 ADAMTS12P58397 1594 aa22.02■■□□□ 1.12
AC007389.3-201ENST00000420724 EEA1Q15075 1411 aa22.02■■□□□ 1.12
AC007389.3-201ENST00000420724 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
AC007389.3-201ENST00000420724 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
AC007389.3-201ENST00000420724 CUL7Q14999 1698 aa21.97■■□□□ 1.11
AC007389.3-201ENST00000420724 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
AC007389.3-201ENST00000420724 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
AC007389.3-201ENST00000420724 CARMIL1Q5VZK9 1371 aa21.94■■□□□ 1.1
AC007389.3-201ENST00000420724 CHD1O14646 1710 aa21.93■■□□□ 1.1
AC007389.3-201ENST00000420724 PRXQ9BXM0 1461 aa21.92■■□□□ 1.1
AC007389.3-201ENST00000420724 FBLN2P98095 1184 aa21.9■■□□□ 1.1
AC007389.3-201ENST00000420724 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
AC007389.3-201ENST00000420724 GRIN2AQ12879 1464 aa21.89■■□□□ 1.09
AC007389.3-201ENST00000420724 RAPGEF2Q9Y4G8 1499 aa21.85■■□□□ 1.09
AC007389.3-201ENST00000420724 KIF21BO75037 1637 aa21.81■■□□□ 1.08
AC007389.3-201ENST00000420724 CEP170Q5SW79 1584 aa21.79■■□□□ 1.08
AC007389.3-201ENST00000420724 NUP160Q12769 1436 aa21.79■■□□□ 1.08
AC007389.3-201ENST00000420724 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
AC007389.3-201ENST00000420724 CLASP1Q7Z460 1538 aa21.71■■□□□ 1.07
AC007389.3-201ENST00000420724 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
AC007389.3-201ENST00000420724 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms