RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 MAP3K19Q56UN5 1328 aa27.65■■■□□ 2.02
EGFR-204ENST00000420316 VPS72Q15906 364 aa27.65■■■□□ 2.02
EGFR-204ENST00000420316 AXIN2Q9Y2T1 843 aa27.65■■■□□ 2.02
EGFR-204ENST00000420316 MAP2P11137 1827 aaKnown RBP27.65■■■□□ 2.02
EGFR-204ENST00000420316 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.64■■■□□ 2.02
EGFR-204ENST00000420316 LMO7Q8WWI1 1683 aa27.64■■■□□ 2.02
EGFR-204ENST00000420316 CAMTA1Q9Y6Y1 1673 aa27.64■■■□□ 2.02
EGFR-204ENST00000420316 RXRBP28702 533 aa27.64■■■□□ 2.01
EGFR-204ENST00000420316 RBM6P78332 1123 aaKnown RBP27.64■■■□□ 2.01
EGFR-204ENST00000420316 EMILIN1Q9Y6C2 1016 aa27.64■■■□□ 2.01
EGFR-204ENST00000420316 EVA1CP58658 441 aa27.63■■■□□ 2.01
EGFR-204ENST00000420316 GJD4Q96KN9 370 aaPredicted RBP27.63■■■□□ 2.01
EGFR-204ENST00000420316 STRN4Q9NRL3 753 aa27.63■■■□□ 2.01
EGFR-204ENST00000420316 NRAPQ86VF7 1730 aa27.62■■■□□ 2.01
EGFR-204ENST00000420316 PEAK1Q9H792 1746 aa27.62■■■□□ 2.01
EGFR-204ENST00000420316 PPM1GO15355 546 aaPredicted RBP27.61■■■□□ 2.01
EGFR-204ENST00000420316 ABCC6O95255 1503 aa27.61■■■□□ 2.01
EGFR-204ENST00000420316 NPC1L1Q9UHC9 1359 aa27.6■■■□□ 2.01
EGFR-204ENST00000420316 AMPHP49418 695 aa27.6■■■□□ 2.01
EGFR-204ENST00000420316 IP6K1Q92551 441 aa27.6■■■□□ 2.01
EGFR-204ENST00000420316 POLKQ9UBT6 870 aa27.58■■■□□ 2.01
EGFR-204ENST00000420316 CCDC9Q9Y3X0 531 aaKnown RBP27.58■■■□□ 2.01
EGFR-204ENST00000420316 COL5A2P05997 1499 aaPredicted RBP27.58■■■□□ 2.01
EGFR-204ENST00000420316 HOXC9P31274 260 aa27.57■■■□□ 2
EGFR-204ENST00000420316 LTV1Q96GA3 475 aaPredicted RBP27.57■■■□□ 2
EGFR-204ENST00000420316 SPATA31A5Q5VU36 1347 aa27.56■■■□□ 2
EGFR-204ENST00000420316 SPATA31A7Q8IWB4 1347 aa27.56■■■□□ 2
EGFR-204ENST00000420316 KIF24Q5T7B8 1368 aa27.56■■■□□ 2
EGFR-204ENST00000420316 LARP1Q6PKG0 1096 aaKnown RBP27.55■■■□□ 2
EGFR-204ENST00000420316 RTL1A6NKG5 1358 aa27.54■■■□□ 2
EGFR-204ENST00000420316 ILDR2Q71H61 639 aa27.54■■■□□ 2
EGFR-204ENST00000420316 BLMP54132 1417 aaPredicted RBP27.54■■■□□ 2
EGFR-204ENST00000420316 WDR17Q8IZU2 1322 aa27.54■■■□□ 2
EGFR-204ENST00000420316 HSP90AB2PQ58FF8 381 aa27.53■■■□□ 2
EGFR-204ENST00000420316 SPATA31A1Q5TZJ5 1347 aa27.53■■■□□ 2
EGFR-204ENST00000420316 CDK12Q9NYV4 1490 aaPredicted RBP27.52■■■□□ 2
EGFR-204ENST00000420316 ONECUT3O60422 494 aaPredicted RBP27.51■■□□□ 1.99
EGFR-204ENST00000420316 CSB-PGBD3P0DP91 1061 aa27.51■■□□□ 1.99
EGFR-204ENST00000420316 ANKRD24Q8TF21 1146 aa27.51■■□□□ 1.99
EGFR-204ENST00000420316 USP35Q9P2H5 1018 aa27.51■■□□□ 1.99
EGFR-204ENST00000420316 ERBB3P21860 1342 aa27.51■■□□□ 1.99
EGFR-204ENST00000420316 CRB1P82279 1406 aa27.5■■□□□ 1.99
EGFR-204ENST00000420316 FLT4P35916 1363 aa27.5■■□□□ 1.99
EGFR-204ENST00000420316 TOM1L2Q6ZVM7 507 aa27.49■■□□□ 1.99
EGFR-204ENST00000420316 GLI3P10071 1580 aa27.49■■□□□ 1.99
EGFR-204ENST00000420316 RGPD2P0DJD1 1756 aa27.49■■□□□ 1.99
EGFR-204ENST00000420316 MTHFSP49914 203 aa27.48■■□□□ 1.99
EGFR-204ENST00000420316 THRAP3Q9Y2W1 955 aaKnown RBP27.48■■□□□ 1.99
EGFR-204ENST00000420316 PARD3Q8TEW0 1356 aa27.47■■□□□ 1.99
EGFR-204ENST00000420316 PPP2R1AP30153 589 aa27.47■■□□□ 1.99
EGFR-204ENST00000420316 TCP11L2Q8N4U5 519 aa27.47■■□□□ 1.99
EGFR-204ENST00000420316 CARD10Q9BWT7 1032 aa27.47■■□□□ 1.99
EGFR-204ENST00000420316 INSRP06213 1382 aa27.47■■□□□ 1.99
EGFR-204ENST00000420316 SMG6Q86US8 1419 aaKnown RBP27.45■■□□□ 1.99
EGFR-204ENST00000420316 BARGINQ6ZT62 677 aa27.45■■□□□ 1.99
EGFR-204ENST00000420316 FAM98CQ17RN3 349 aaKnown RBP27.44■■□□□ 1.98
EGFR-204ENST00000420316 NLRP2Q9NX02 1062 aa27.43■■□□□ 1.98
EGFR-204ENST00000420316 RGS12O14924 1447 aa27.43■■□□□ 1.98
EGFR-204ENST00000420316 SEPT12Q8IYM1 358 aa27.41■■□□□ 1.98
EGFR-204ENST00000420316 USHBP1Q8N6Y0 703 aa27.41■■□□□ 1.98
EGFR-204ENST00000420316 PRKRIP1Q9H875 184 aaPredicted RBP27.4■■□□□ 1.98
EGFR-204ENST00000420316 EIF4A2Q14240 407 aaKnown RBP27.39■■□□□ 1.98
EGFR-204ENST00000420316 RALBP1Q15311 655 aa27.39■■□□□ 1.97
EGFR-204ENST00000420316 NBPF6Q5VWK0 638 aa27.38■■□□□ 1.97
EGFR-204ENST00000420316 NBPF4Q96M43 638 aa27.38■■□□□ 1.97
EGFR-204ENST00000420316 A0A0G2JS52 829 aa27.36■■□□□ 1.97
EGFR-204ENST00000420316 MYT1Q01538 1121 aa27.36■■□□□ 1.97
EGFR-204ENST00000420316 CDCA7Q9BWT1 371 aaPredicted RBP27.36■■□□□ 1.97
EGFR-204ENST00000420316 FAM208AQ9UK61 1670 aaKnown RBP27.35■■□□□ 1.97
EGFR-204ENST00000420316 EYA1Q99502 592 aa27.33■■□□□ 1.97
EGFR-204ENST00000420316 COL3A1P02461 1466 aaPredicted RBP27.33■■□□□ 1.96
EGFR-204ENST00000420316 MYBBP1AQ9BQG0 1328 aaKnown RBP27.32■■□□□ 1.96
EGFR-204ENST00000420316 THSD7AQ9UPZ6 1657 aa27.32■■□□□ 1.96
EGFR-204ENST00000420316 ANP32CO43423 234 aa27.31■■□□□ 1.96
EGFR-204ENST00000420316 IL13P35225 146 aa27.31■■□□□ 1.96
EGFR-204ENST00000420316 WNK3Q9BYP7 1800 aa27.31■■□□□ 1.96
EGFR-204ENST00000420316 DISP2A7MBM2 1401 aa27.29■■□□□ 1.96
EGFR-204ENST00000420316 DIAPH1O60610 1272 aaKnown RBP27.29■■□□□ 1.96
EGFR-204ENST00000420316 IL2RBP14784 551 aa27.29■■□□□ 1.96
EGFR-204ENST00000420316 KRT27Q7Z3Y8 459 aa27.29■■□□□ 1.96
EGFR-204ENST00000420316 CFAP53Q96M91 514 aa27.28■■□□□ 1.96
EGFR-204ENST00000420316 BRWD3Q6RI45 1802 aa27.28■■□□□ 1.96
EGFR-204ENST00000420316 DDB1Q16531 1140 aa27.26■■□□□ 1.95
EGFR-204ENST00000420316 U2SURPO15042 1029 aaKnown RBP27.25■■□□□ 1.95
EGFR-204ENST00000420316 RGPD1P0DJD0 1748 aa27.25■■□□□ 1.95
EGFR-204ENST00000420316 PDE3BQ13370 1112 aa27.25■■□□□ 1.95
EGFR-204ENST00000420316 AEBP1Q8IUX7 1158 aa27.25■■□□□ 1.95
EGFR-204ENST00000420316 EXOC5O00471 708 aa27.24■■□□□ 1.95
EGFR-204ENST00000420316 NCAPD2Q15021 1401 aa27.23■■□□□ 1.95
EGFR-204ENST00000420316 IGSF1Q8N6C5 1336 aa27.23■■□□□ 1.95
EGFR-204ENST00000420316 CCDC184Q52MB2 194 aa27.23■■□□□ 1.95
EGFR-204ENST00000420316 DIEXFQ68CQ4 756 aaKnown RBP27.23■■□□□ 1.95
EGFR-204ENST00000420316 MEGF6O75095 1541 aa27.23■■□□□ 1.95
EGFR-204ENST00000420316 PARP4Q9UKK3 1724 aaKnown RBP27.22■■□□□ 1.95
EGFR-204ENST00000420316 HMOX1P09601 288 aa27.22■■□□□ 1.95
EGFR-204ENST00000420316 SULT6B1Q6IMI4 303 aa27.22■■□□□ 1.95
EGFR-204ENST00000420316 RAPGEF4Q8WZA2 1011 aa27.22■■□□□ 1.95
EGFR-204ENST00000420316 FAM182BQ5T319 152 aa27.21■■□□□ 1.95
EGFR-204ENST00000420316 LRRC37A3O60309 1634 aa27.2■■□□□ 1.95
EGFR-204ENST00000420316 SOCS7O14512 581 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms