RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 Q6ZVU0 165 aa7.98□□□□□ -1.13
SDCBPP3-201ENST00000419629 LRRN4Q8WUT4 740 aa7.98□□□□□ -1.13
SDCBPP3-201ENST00000419629 TTLL8A6PVC2 850 aa7.97□□□□□ -1.13
SDCBPP3-201ENST00000419629 CBLBQ13191 982 aa7.97□□□□□ -1.13
SDCBPP3-201ENST00000419629 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.97□□□□□ -1.13
SDCBPP3-201ENST00000419629 GPR161Q8N6U8 529 aaKnown RBP7.97□□□□□ -1.13
SDCBPP3-201ENST00000419629 PTSQ03393 145 aa7.96□□□□□ -1.14
SDCBPP3-201ENST00000419629 ARHGAP9Q9BRR9 750 aa7.96□□□□□ -1.14
SDCBPP3-201ENST00000419629 PGPEP1Q9NXJ5 209 aa7.96□□□□□ -1.14
SDCBPP3-201ENST00000419629 FKBPLQ9UIM3 349 aa7.96□□□□□ -1.14
SDCBPP3-201ENST00000419629 FIGNL2A6NMB9 653 aa7.95□□□□□ -1.14
SDCBPP3-201ENST00000419629 SPINT1O43278 529 aa7.95□□□□□ -1.14
SDCBPP3-201ENST00000419629 KRT76Q01546 638 aa7.95□□□□□ -1.14
SDCBPP3-201ENST00000419629 SKIV2LQ15477 1246 aaKnown RBP7.95□□□□□ -1.14
SDCBPP3-201ENST00000419629 KCTD15Q96SI1 283 aaPredicted RBP7.95□□□□□ -1.14
SDCBPP3-201ENST00000419629 NR6A1Q15406 480 aa7.94□□□□□ -1.14
SDCBPP3-201ENST00000419629 OCSTAMPQ9BR26 566 aa7.94□□□□□ -1.14
SDCBPP3-201ENST00000419629 PROCA1Q8NCQ7 364 aaPredicted RBP7.93□□□□□ -1.14
SDCBPP3-201ENST00000419629 SLC10A4Q96EP9 437 aa7.93□□□□□ -1.14
SDCBPP3-201ENST00000419629 CDV3Q9UKY7 258 aaKnown RBP7.93□□□□□ -1.14
SDCBPP3-201ENST00000419629 ZC3H4Q9UPT8 1303 aaKnown RBP7.93□□□□□ -1.14
SDCBPP3-201ENST00000419629 GSK3AP49840 483 aa7.92□□□□□ -1.14
SDCBPP3-201ENST00000419629 PPP2R2DQ66LE6 453 aa7.92□□□□□ -1.14
SDCBPP3-201ENST00000419629 ZBTB33Q86T24 672 aa7.92□□□□□ -1.14
SDCBPP3-201ENST00000419629 NANOS1Q8WY41 292 aaKnown RBP7.92□□□□□ -1.14
SDCBPP3-201ENST00000419629 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.92□□□□□ -1.14
SDCBPP3-201ENST00000419629 DHX9Q08211 1270 aaKnown RBP7.91□□□□□ -1.14
SDCBPP3-201ENST00000419629 KCNMA1Q12791 1236 aa7.91□□□□□ -1.14
SDCBPP3-201ENST00000419629 SH3D19Q5HYK7 790 aa7.91□□□□□ -1.14
SDCBPP3-201ENST00000419629 INTS6LQ5JSJ4 861 aaKnown RBP7.91□□□□□ -1.14
SDCBPP3-201ENST00000419629 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
SDCBPP3-201ENST00000419629 AGBL1Q96MI9 1066 aa7.91□□□□□ -1.14
SDCBPP3-201ENST00000419629 CNTNAP3BQ96NU0 1288 aa7.91□□□□□ -1.14
SDCBPP3-201ENST00000419629 CNTNAP3Q9BZ76 1288 aa7.91□□□□□ -1.14
SDCBPP3-201ENST00000419629 SLC35F4A4IF30 521 aa7.9□□□□□ -1.14
SDCBPP3-201ENST00000419629 CTSOP43234 321 aaPredicted RBP7.9□□□□□ -1.14
SDCBPP3-201ENST00000419629 COL25A1Q9BXS0 654 aaPredicted RBP7.9□□□□□ -1.14
SDCBPP3-201ENST00000419629 GPSM3Q9Y4H4 160 aa7.9□□□□□ -1.14
SDCBPP3-201ENST00000419629 PTK2Q05397 1052 aa7.89□□□□□ -1.15
SDCBPP3-201ENST00000419629 ADAM32Q8TC27 787 aa7.89□□□□□ -1.15
SDCBPP3-201ENST00000419629 INSM2Q96T92 566 aaPredicted RBP7.89□□□□□ -1.15
SDCBPP3-201ENST00000419629 FAM117AQ9C073 453 aa7.89□□□□□ -1.15
SDCBPP3-201ENST00000419629 GPBP1L1Q9HC44 474 aaPredicted RBP7.89□□□□□ -1.15
SDCBPP3-201ENST00000419629 RNFT1Q5M7Z0 435 aa7.88□□□□□ -1.15
SDCBPP3-201ENST00000419629 EPS8L1Q8TE68 723 aa7.88□□□□□ -1.15
SDCBPP3-201ENST00000419629 KDM4CQ9H3R0 1056 aa7.88□□□□□ -1.15
SDCBPP3-201ENST00000419629 AP1G2O75843 785 aa7.87□□□□□ -1.15
SDCBPP3-201ENST00000419629 ITGA6P23229 1130 aa7.87□□□□□ -1.15
SDCBPP3-201ENST00000419629 RELBQ01201 579 aa7.87□□□□□ -1.15
SDCBPP3-201ENST00000419629 VWA5B2Q8N398 1253 aa7.87□□□□□ -1.15
SDCBPP3-201ENST00000419629 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
SDCBPP3-201ENST00000419629 DDRGK1Q96HY6 314 aa7.86□□□□□ -1.15
SDCBPP3-201ENST00000419629 ADAMTS8Q9UP79 889 aa7.86□□□□□ -1.15
SDCBPP3-201ENST00000419629 KDF1Q8NAX2 398 aaPredicted RBP7.85□□□□□ -1.15
SDCBPP3-201ENST00000419629 ZNF784Q8NCA9 323 aaPredicted RBP7.85□□□□□ -1.15
SDCBPP3-201ENST00000419629 RNF217Q8TC41 542 aa7.85□□□□□ -1.15
SDCBPP3-201ENST00000419629 BCANQ96GW7 911 aa7.85□□□□□ -1.15
SDCBPP3-201ENST00000419629 ZNF395Q9H8N7 513 aaPredicted RBP7.85□□□□□ -1.15
SDCBPP3-201ENST00000419629 HMX1Q9NP08 348 aaPredicted RBP7.85□□□□□ -1.15
SDCBPP3-201ENST00000419629 SENP3-EIF4A1A0A087X0R7 540 aa7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 LOC100996750A0A140TA64 210 aa7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 LILRA1O75019 489 aa7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 SLURP2P0DP57 97 aa7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 NBPF20Q3BBV1 942 aa7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 ZNF385CQ66K41 422 aaPredicted RBP7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 KCTD17Q8N5Z5 321 aa7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 POLMQ9NP87 494 aaPredicted RBP7.84□□□□□ -1.15
SDCBPP3-201ENST00000419629 ESPNB1AK53 854 aa7.83□□□□□ -1.16
SDCBPP3-201ENST00000419629 RASSF7Q02833 373 aa7.83□□□□□ -1.16
SDCBPP3-201ENST00000419629 SV2AQ7L0J3 742 aa7.83□□□□□ -1.16
SDCBPP3-201ENST00000419629 TMEM151AQ8N4L1 468 aa7.83□□□□□ -1.16
SDCBPP3-201ENST00000419629 WHAMMQ8TF30 809 aa7.83□□□□□ -1.16
SDCBPP3-201ENST00000419629 ATP1B4Q9UN42 357 aaPredicted RBP7.83□□□□□ -1.16
SDCBPP3-201ENST00000419629 ERVH48-1M5A8F1 160 aa7.82□□□□□ -1.16
SDCBPP3-201ENST00000419629 ADH1AP07327 375 aa7.82□□□□□ -1.16
SDCBPP3-201ENST00000419629 USP17L8P0C7I0 530 aa7.82□□□□□ -1.16
SDCBPP3-201ENST00000419629 RAB15P59190 212 aa7.82□□□□□ -1.16
SDCBPP3-201ENST00000419629 CDC14CA4D256 554 aa7.81□□□□□ -1.16
SDCBPP3-201ENST00000419629 PTGIRP43119 386 aa7.81□□□□□ -1.16
SDCBPP3-201ENST00000419629 FOXD4L5Q5VV16 416 aaPredicted RBP7.81□□□□□ -1.16
SDCBPP3-201ENST00000419629 DZIP3Q86Y13 1208 aaKnown RBP7.81□□□□□ -1.16
SDCBPP3-201ENST00000419629 PNMA1Q8ND90 353 aa7.81□□□□□ -1.16
SDCBPP3-201ENST00000419629 ARHGEF15O94989 841 aa7.8□□□□□ -1.16
SDCBPP3-201ENST00000419629 GDF11O95390 407 aa7.8□□□□□ -1.16
SDCBPP3-201ENST00000419629 SVOPQ8N4V2 548 aa7.8□□□□□ -1.16
SDCBPP3-201ENST00000419629 RFC5P40937 340 aa7.79□□□□□ -1.16
SDCBPP3-201ENST00000419629 SUZ12Q15022 739 aaKnown RBP7.79□□□□□ -1.16
SDCBPP3-201ENST00000419629 TRIM34Q9BYJ4 488 aa7.79□□□□□ -1.16
SDCBPP3-201ENST00000419629 CUEDC1Q9NWM3 386 aaPredicted RBP7.79□□□□□ -1.16
SDCBPP3-201ENST00000419629 RNF225M0QZC1 329 aaPredicted RBP7.78□□□□□ -1.16
SDCBPP3-201ENST00000419629 LYSMD3Q7Z3D4 306 aa7.77□□□□□ -1.17
SDCBPP3-201ENST00000419629 SEPT12Q8IYM1 358 aa7.77□□□□□ -1.17
SDCBPP3-201ENST00000419629 RNF144AP50876 292 aaPredicted RBP7.76□□□□□ -1.17
SDCBPP3-201ENST00000419629 ADAMTS2O95450 1211 aa7.75□□□□□ -1.17
SDCBPP3-201ENST00000419629 GAS6Q14393 721 aa7.75□□□□□ -1.17
SDCBPP3-201ENST00000419629 PRICKLE2Q7Z3G6 844 aa7.75□□□□□ -1.17
SDCBPP3-201ENST00000419629 CYLDQ9NQC7 956 aa7.75□□□□□ -1.17
SDCBPP3-201ENST00000419629 LYPD4Q6UWN0 246 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms