RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 ABCC6O95255 1503 aa25.03■■□□□ 1.6
SEMA3B-202ENST00000418576 PARD3Q8TEW0 1356 aa25.02■■□□□ 1.6
SEMA3B-202ENST00000418576 HOXC9P31274 260 aa25.02■■□□□ 1.6
SEMA3B-202ENST00000418576 UNC5CLQ8IV45 518 aa25.02■■□□□ 1.6
SEMA3B-202ENST00000418576 AXIN2Q9Y2T1 843 aa25.02■■□□□ 1.6
SEMA3B-202ENST00000418576 FLT4P35916 1363 aa25.02■■□□□ 1.6
SEMA3B-202ENST00000418576 BLMP54132 1417 aaPredicted RBP25.01■■□□□ 1.59
SEMA3B-202ENST00000418576 PLCH1Q4KWH8 1693 aa25■■□□□ 1.59
SEMA3B-202ENST00000418576 STRN4Q9NRL3 753 aa25■■□□□ 1.59
SEMA3B-202ENST00000418576 MAP2P11137 1827 aaKnown RBP25■■□□□ 1.59
SEMA3B-202ENST00000418576 NWD2Q9ULI1 1742 aa25■■□□□ 1.59
SEMA3B-202ENST00000418576 LMO7Q8WWI1 1683 aa24.99■■□□□ 1.59
SEMA3B-202ENST00000418576 CAMTA1Q9Y6Y1 1673 aa24.99■■□□□ 1.59
SEMA3B-202ENST00000418576 BCL9LQ86UU0 1499 aa24.99■■□□□ 1.59
SEMA3B-202ENST00000418576 COL18A1P39060 1754 aa24.98■■□□□ 1.59
SEMA3B-202ENST00000418576 MTHFSP49914 203 aa24.98■■□□□ 1.59
SEMA3B-202ENST00000418576 ANP32CO43423 234 aa24.98■■□□□ 1.59
SEMA3B-202ENST00000418576 PPP2R1AP30153 589 aa24.98■■□□□ 1.59
SEMA3B-202ENST00000418576 PRKRIP1Q9H875 184 aaPredicted RBP24.98■■□□□ 1.59
SEMA3B-202ENST00000418576 SMG6Q86US8 1419 aaKnown RBP24.97■■□□□ 1.59
SEMA3B-202ENST00000418576 HSP90AB2PQ58FF8 381 aa24.97■■□□□ 1.59
SEMA3B-202ENST00000418576 INSRP06213 1382 aa24.96■■□□□ 1.59
SEMA3B-202ENST00000418576 CSB-PGBD3P0DP91 1061 aa24.96■■□□□ 1.59
SEMA3B-202ENST00000418576 TRPC5Q9UL62 973 aaPredicted RBP24.96■■□□□ 1.59
SEMA3B-202ENST00000418576 COL5A2P05997 1499 aaPredicted RBP24.96■■□□□ 1.59
SEMA3B-202ENST00000418576 ANKRD24Q8TF21 1146 aa24.95■■□□□ 1.59
SEMA3B-202ENST00000418576 ERBB3P21860 1342 aa24.95■■□□□ 1.58
SEMA3B-202ENST00000418576 LTV1Q96GA3 475 aaPredicted RBP24.94■■□□□ 1.58
SEMA3B-202ENST00000418576 QTRT2Q9H974 415 aaKnown RBP24.94■■□□□ 1.58
SEMA3B-202ENST00000418576 VPS72Q15906 364 aa24.93■■□□□ 1.58
SEMA3B-202ENST00000418576 CCDC9Q9Y3X0 531 aaKnown RBP24.93■■□□□ 1.58
SEMA3B-202ENST00000418576 PEAK1Q9H792 1746 aa24.93■■□□□ 1.58
SEMA3B-202ENST00000418576 WDR17Q8IZU2 1322 aa24.93■■□□□ 1.58
SEMA3B-202ENST00000418576 CDK12Q9NYV4 1490 aaPredicted RBP24.93■■□□□ 1.58
SEMA3B-202ENST00000418576 MYBBP1AQ9BQG0 1328 aaKnown RBP24.92■■□□□ 1.58
SEMA3B-202ENST00000418576 LARP1Q6PKG0 1096 aaKnown RBP24.92■■□□□ 1.58
SEMA3B-202ENST00000418576 TOM1L2Q6ZVM7 507 aa24.92■■□□□ 1.58
SEMA3B-202ENST00000418576 CFAP53Q96M91 514 aa24.92■■□□□ 1.58
SEMA3B-202ENST00000418576 RGS17Q9UGC6 210 aaPredicted RBP24.92■■□□□ 1.58
SEMA3B-202ENST00000418576 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.92■■□□□ 1.58
SEMA3B-202ENST00000418576 NRAPQ86VF7 1730 aa24.91■■□□□ 1.58
SEMA3B-202ENST00000418576 RGPD5Q99666 1765 aa24.9■■□□□ 1.58
SEMA3B-202ENST00000418576 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
SEMA3B-202ENST00000418576 CRB1P82279 1406 aa24.89■■□□□ 1.58
SEMA3B-202ENST00000418576 ATRNO75882 1429 aa24.89■■□□□ 1.57
SEMA3B-202ENST00000418576 NLRP2Q9NX02 1062 aa24.88■■□□□ 1.57
SEMA3B-202ENST00000418576 GJD4Q96KN9 370 aaPredicted RBP24.88■■□□□ 1.57
SEMA3B-202ENST00000418576 SPATA31A5Q5VU36 1347 aa24.87■■□□□ 1.57
SEMA3B-202ENST00000418576 SPATA31A7Q8IWB4 1347 aa24.87■■□□□ 1.57
SEMA3B-202ENST00000418576 USP35Q9P2H5 1018 aa24.87■■□□□ 1.57
SEMA3B-202ENST00000418576 EIF4A2Q14240 407 aaKnown RBP24.86■■□□□ 1.57
SEMA3B-202ENST00000418576 SPATA31A1Q5TZJ5 1347 aa24.86■■□□□ 1.57
SEMA3B-202ENST00000418576 DIAPH1O60610 1272 aaKnown RBP24.85■■□□□ 1.57
SEMA3B-202ENST00000418576 CARD10Q9BWT7 1032 aa24.85■■□□□ 1.57
SEMA3B-202ENST00000418576 RXRBP28702 533 aa24.84■■□□□ 1.57
SEMA3B-202ENST00000418576 RBM6P78332 1123 aaKnown RBP24.84■■□□□ 1.57
SEMA3B-202ENST00000418576 THRAP3Q9Y2W1 955 aaKnown RBP24.84■■□□□ 1.57
SEMA3B-202ENST00000418576 POTEAQ6S8J7 498 aa24.83■■□□□ 1.57
SEMA3B-202ENST00000418576 TCP11L2Q8N4U5 519 aa24.83■■□□□ 1.57
SEMA3B-202ENST00000418576 IL13P35225 146 aa24.82■■□□□ 1.56
SEMA3B-202ENST00000418576 FAM208AQ9UK61 1670 aaKnown RBP24.81■■□□□ 1.56
SEMA3B-202ENST00000418576 NBPF6Q5VWK0 638 aa24.81■■□□□ 1.56
SEMA3B-202ENST00000418576 NBPF4Q96M43 638 aa24.81■■□□□ 1.56
SEMA3B-202ENST00000418576 NUDCQ9Y266 331 aa24.8■■□□□ 1.56
SEMA3B-202ENST00000418576 EYA1Q99502 592 aa24.8■■□□□ 1.56
SEMA3B-202ENST00000418576 BARGINQ6ZT62 677 aa24.79■■□□□ 1.56
SEMA3B-202ENST00000418576 COL3A1P02461 1466 aaPredicted RBP24.77■■□□□ 1.56
SEMA3B-202ENST00000418576 FAM98CQ17RN3 349 aaKnown RBP24.77■■□□□ 1.56
SEMA3B-202ENST00000418576 CDCA7Q9BWT1 371 aaPredicted RBP24.76■■□□□ 1.55
SEMA3B-202ENST00000418576 IGSF1Q8N6C5 1336 aa24.76■■□□□ 1.55
SEMA3B-202ENST00000418576 GLI3P10071 1580 aa24.75■■□□□ 1.55
SEMA3B-202ENST00000418576 U2SURPO15042 1029 aaKnown RBP24.75■■□□□ 1.55
SEMA3B-202ENST00000418576 USHBP1Q8N6Y0 703 aa24.75■■□□□ 1.55
SEMA3B-202ENST00000418576 A0A0G2JS52 829 aa24.75■■□□□ 1.55
SEMA3B-202ENST00000418576 MYT1Q01538 1121 aa24.75■■□□□ 1.55
SEMA3B-202ENST00000418576 ONECUT3O60422 494 aaPredicted RBP24.74■■□□□ 1.55
SEMA3B-202ENST00000418576 IL2RBP14784 551 aa24.73■■□□□ 1.55
SEMA3B-202ENST00000418576 RAPGEF4Q8WZA2 1011 aa24.73■■□□□ 1.55
SEMA3B-202ENST00000418576 RGPD2P0DJD1 1756 aa24.72■■□□□ 1.55
SEMA3B-202ENST00000418576 SULT6B1Q6IMI4 303 aa24.72■■□□□ 1.55
SEMA3B-202ENST00000418576 U2AF1L5P0DN76 240 aaPredicted RBP24.7■■□□□ 1.55
SEMA3B-202ENST00000418576 U2AF1Q01081 240 aaKnown RBP eCLIP24.7■■□□□ 1.55
SEMA3B-202ENST00000418576 NCAPD2Q15021 1401 aa24.7■■□□□ 1.54
SEMA3B-202ENST00000418576 TATP17735 454 aaPredicted RBP24.7■■□□□ 1.54
SEMA3B-202ENST00000418576 SEPT12Q8IYM1 358 aa24.7■■□□□ 1.54
SEMA3B-202ENST00000418576 MRS2Q9HD23 443 aa24.69■■□□□ 1.54
SEMA3B-202ENST00000418576 HMOX1P09601 288 aa24.68■■□□□ 1.54
SEMA3B-202ENST00000418576 RGPD1P0DJD0 1748 aa24.68■■□□□ 1.54
SEMA3B-202ENST00000418576 KDRP35968 1356 aa24.67■■□□□ 1.54
SEMA3B-202ENST00000418576 DISP2A7MBM2 1401 aa24.67■■□□□ 1.54
SEMA3B-202ENST00000418576 WDR43Q15061 677 aaKnown RBP eCLIP24.67■■□□□ 1.54
SEMA3B-202ENST00000418576 AEBP1Q8IUX7 1158 aa24.67■■□□□ 1.54
SEMA3B-202ENST00000418576 EXOC5O00471 708 aa24.66■■□□□ 1.54
SEMA3B-202ENST00000418576 DDB1Q16531 1140 aa24.66■■□□□ 1.54
SEMA3B-202ENST00000418576 CCDC184Q52MB2 194 aa24.65■■□□□ 1.54
SEMA3B-202ENST00000418576 FCHSD2O94868 740 aa24.64■■□□□ 1.53
SEMA3B-202ENST00000418576 MEGF6O75095 1541 aa24.63■■□□□ 1.53
SEMA3B-202ENST00000418576 RGS12O14924 1447 aa24.63■■□□□ 1.53
SEMA3B-202ENST00000418576 THSD7AQ9UPZ6 1657 aa24.63■■□□□ 1.53
SEMA3B-202ENST00000418576 PDE3BQ13370 1112 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms