RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 ZBTB7CA1YPR0 619 aa19.51■□□□□ 0.71
SGCE-202ENST00000415788 IP6K1Q92551 441 aa19.51■□□□□ 0.71
SGCE-202ENST00000415788 EMILIN1Q9Y6C2 1016 aa19.51■□□□□ 0.71
SGCE-202ENST00000415788 BLMP54132 1417 aaPredicted RBP19.5■□□□□ 0.71
SGCE-202ENST00000415788 COL14A1Q05707 1796 aaKnown RBP19.5■□□□□ 0.71
SGCE-202ENST00000415788 CHRNA2Q15822 529 aa19.5■□□□□ 0.71
SGCE-202ENST00000415788 ANP32EQ9BTT0 268 aa19.5■□□□□ 0.71
SGCE-202ENST00000415788 PPM1GO15355 546 aaPredicted RBP19.49■□□□□ 0.71
SGCE-202ENST00000415788 HOXC9P31274 260 aa19.49■□□□□ 0.71
SGCE-202ENST00000415788 MTHFSP49914 203 aa19.49■□□□□ 0.71
SGCE-202ENST00000415788 NGLY1Q96IV0 654 aa19.49■□□□□ 0.71
SGCE-202ENST00000415788 C8orf37Q96NL8 207 aa19.49■□□□□ 0.71
SGCE-202ENST00000415788 CDK12Q9NYV4 1490 aaPredicted RBP19.49■□□□□ 0.71
SGCE-202ENST00000415788 LTN1O94822 1766 aa19.48■□□□□ 0.71
SGCE-202ENST00000415788 INSRP06213 1382 aa19.47■□□□□ 0.71
SGCE-202ENST00000415788 FNBP4Q8N3X1 1017 aaPredicted RBP19.47■□□□□ 0.71
SGCE-202ENST00000415788 SLIT2O94813 1529 aa19.47■□□□□ 0.71
SGCE-202ENST00000415788 LMO7Q8WWI1 1683 aa19.46■□□□□ 0.71
SGCE-202ENST00000415788 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
SGCE-202ENST00000415788 BTG4Q9NY30 223 aa19.45■□□□□ 0.7
SGCE-202ENST00000415788 AXIN2Q9Y2T1 843 aa19.45■□□□□ 0.7
SGCE-202ENST00000415788 MAP2P11137 1827 aaKnown RBP19.45■□□□□ 0.7
SGCE-202ENST00000415788 COL18A1P39060 1754 aa19.45■□□□□ 0.7
SGCE-202ENST00000415788 CAMTA1Q9Y6Y1 1673 aa19.44■□□□□ 0.7
SGCE-202ENST00000415788 HSP90AB2PQ58FF8 381 aa19.44■□□□□ 0.7
SGCE-202ENST00000415788 PEAK1Q9H792 1746 aa19.44■□□□□ 0.7
SGCE-202ENST00000415788 COL5A2P05997 1499 aaPredicted RBP19.43■□□□□ 0.7
SGCE-202ENST00000415788 ERBB3P21860 1342 aa19.43■□□□□ 0.7
SGCE-202ENST00000415788 NWD2Q9ULI1 1742 aa19.43■□□□□ 0.7
SGCE-202ENST00000415788 EVA1CP58658 441 aa19.42■□□□□ 0.7
SGCE-202ENST00000415788 PLCH1Q4KWH8 1693 aa19.42■□□□□ 0.7
SGCE-202ENST00000415788 UNC5CLQ8IV45 518 aa19.42■□□□□ 0.7
SGCE-202ENST00000415788 AFF2P51816 1311 aa19.41■□□□□ 0.7
SGCE-202ENST00000415788 ANKRD24Q8TF21 1146 aa19.41■□□□□ 0.7
SGCE-202ENST00000415788 USP21Q9UK80 565 aa19.41■□□□□ 0.7
SGCE-202ENST00000415788 BCL9LQ86UU0 1499 aa19.4■□□□□ 0.7
SGCE-202ENST00000415788 WDR17Q8IZU2 1322 aa19.4■□□□□ 0.7
SGCE-202ENST00000415788 CSB-PGBD3P0DP91 1061 aa19.39■□□□□ 0.7
SGCE-202ENST00000415788 STRN4Q9NRL3 753 aa19.39■□□□□ 0.7
SGCE-202ENST00000415788 DIAPH1O60610 1272 aaKnown RBP19.39■□□□□ 0.69
SGCE-202ENST00000415788 ZNF772Q68DY9 489 aaPredicted RBP19.39■□□□□ 0.69
SGCE-202ENST00000415788 EIF4A2Q14240 407 aaKnown RBP19.38■□□□□ 0.69
SGCE-202ENST00000415788 COL3A1P02461 1466 aaPredicted RBP19.38■□□□□ 0.69
SGCE-202ENST00000415788 LTV1Q96GA3 475 aaPredicted RBP19.37■□□□□ 0.69
SGCE-202ENST00000415788 NRAPQ86VF7 1730 aa19.37■□□□□ 0.69
SGCE-202ENST00000415788 IL13P35225 146 aa19.37■□□□□ 0.69
SGCE-202ENST00000415788 CRB1P82279 1406 aa19.37■□□□□ 0.69
SGCE-202ENST00000415788 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.37■□□□□ 0.69
SGCE-202ENST00000415788 VPS72Q15906 364 aa19.36■□□□□ 0.69
SGCE-202ENST00000415788 LARP1Q6PKG0 1096 aaKnown RBP19.36■□□□□ 0.69
SGCE-202ENST00000415788 TOM1L2Q6ZVM7 507 aa19.36■□□□□ 0.69
SGCE-202ENST00000415788 NUDCQ9Y266 331 aa19.36■□□□□ 0.69
SGCE-202ENST00000415788 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
SGCE-202ENST00000415788 TRPC5Q9UL62 973 aaPredicted RBP19.35■□□□□ 0.69
SGCE-202ENST00000415788 CCER2I3L3R5 266 aa19.35■□□□□ 0.69
SGCE-202ENST00000415788 FAM208AQ9UK61 1670 aaKnown RBP19.34■□□□□ 0.69
SGCE-202ENST00000415788 CARD10Q9BWT7 1032 aa19.34■□□□□ 0.69
SGCE-202ENST00000415788 NLRP2Q9NX02 1062 aa19.34■□□□□ 0.69
SGCE-202ENST00000415788 RGPD5Q99666 1765 aa19.34■□□□□ 0.69
SGCE-202ENST00000415788 ATRNO75882 1429 aa19.32■□□□□ 0.68
SGCE-202ENST00000415788 SPATA31A5Q5VU36 1347 aa19.32■□□□□ 0.68
SGCE-202ENST00000415788 SPATA31A7Q8IWB4 1347 aa19.32■□□□□ 0.68
SGCE-202ENST00000415788 IGSF1Q8N6C5 1336 aa19.32■□□□□ 0.68
SGCE-202ENST00000415788 MRS2Q9HD23 443 aa19.32■□□□□ 0.68
SGCE-202ENST00000415788 CCDC9Q9Y3X0 531 aaKnown RBP19.32■□□□□ 0.68
SGCE-202ENST00000415788 NBPF6Q5VWK0 638 aa19.31■□□□□ 0.68
SGCE-202ENST00000415788 NBPF4Q96M43 638 aa19.31■□□□□ 0.68
SGCE-202ENST00000415788 EYA1Q99502 592 aa19.31■□□□□ 0.68
SGCE-202ENST00000415788 THRAP3Q9Y2W1 955 aaKnown RBP19.31■□□□□ 0.68
SGCE-202ENST00000415788 SPATA31A1Q5TZJ5 1347 aa19.31■□□□□ 0.68
SGCE-202ENST00000415788 QTRT2Q9H974 415 aaKnown RBP19.31■□□□□ 0.68
SGCE-202ENST00000415788 NCAPD2Q15021 1401 aa19.3■□□□□ 0.68
SGCE-202ENST00000415788 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
SGCE-202ENST00000415788 TCP11L2Q8N4U5 519 aa19.3■□□□□ 0.68
SGCE-202ENST00000415788 GJD4Q96KN9 370 aaPredicted RBP19.29■□□□□ 0.68
SGCE-202ENST00000415788 NEFLP07196 543 aa19.28■□□□□ 0.68
SGCE-202ENST00000415788 WDR43Q15061 677 aaKnown RBP eCLIP19.28■□□□□ 0.68
SGCE-202ENST00000415788 CCDC184Q52MB2 194 aa19.28■□□□□ 0.68
SGCE-202ENST00000415788 RGS17Q9UGC6 210 aaPredicted RBP19.28■□□□□ 0.68
SGCE-202ENST00000415788 KDRP35968 1356 aa19.28■□□□□ 0.68
SGCE-202ENST00000415788 RGPD1P0DJD0 1748 aa19.28■□□□□ 0.68
SGCE-202ENST00000415788 U2AF1L5P0DN76 240 aaPredicted RBP19.27■□□□□ 0.68
SGCE-202ENST00000415788 U2AF1Q01081 240 aaKnown RBP eCLIP19.27■□□□□ 0.68
SGCE-202ENST00000415788 BARGINQ6ZT62 677 aa19.27■□□□□ 0.68
SGCE-202ENST00000415788 USP35Q9P2H5 1018 aa19.27■□□□□ 0.68
SGCE-202ENST00000415788 FKBP8Q14318 412 aa19.26■□□□□ 0.67
SGCE-202ENST00000415788 CDCA7Q9BWT1 371 aaPredicted RBP19.26■□□□□ 0.67
SGCE-202ENST00000415788 SULT6B1Q6IMI4 303 aa19.26■□□□□ 0.67
SGCE-202ENST00000415788 PLEKHG2Q9H7P9 1386 aa19.26■□□□□ 0.67
SGCE-202ENST00000415788 RBM6P78332 1123 aaKnown RBP19.25■□□□□ 0.67
SGCE-202ENST00000415788 USHBP1Q8N6Y0 703 aa19.25■□□□□ 0.67
SGCE-202ENST00000415788 FCHSD2O94868 740 aa19.24■□□□□ 0.67
SGCE-202ENST00000415788 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
SGCE-202ENST00000415788 RAPGEF4Q8WZA2 1011 aa19.24■□□□□ 0.67
SGCE-202ENST00000415788 PNNQ9H307 717 aaKnown RBP19.24■□□□□ 0.67
SGCE-202ENST00000415788 IL2RBP14784 551 aa19.24■□□□□ 0.67
SGCE-202ENST00000415788 HMOX1P09601 288 aa19.22■□□□□ 0.67
SGCE-202ENST00000415788 RXRBP28702 533 aa19.22■□□□□ 0.67
SGCE-202ENST00000415788 AEBP1Q8IUX7 1158 aa19.22■□□□□ 0.67
SGCE-202ENST00000415788 GLI3P10071 1580 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms