RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 CAMTA1Q9Y6Y1 1673 aa10.69□□□□□ -0.7
CPSF4-202ENST00000412686 GLI3P10071 1580 aa10.69□□□□□ -0.7
CPSF4-202ENST00000412686 CPDO75976 1380 aa10.68□□□□□ -0.7
CPSF4-202ENST00000412686 RGPD5Q99666 1765 aa10.68□□□□□ -0.7
CPSF4-202ENST00000412686 FYB1O15117 783 aa10.68□□□□□ -0.7
CPSF4-202ENST00000412686 FBLN1P23142 703 aa10.68□□□□□ -0.7
CPSF4-202ENST00000412686 QTRT2Q9H974 415 aaKnown RBP10.68□□□□□ -0.7
CPSF4-202ENST00000412686 PANK3Q9H999 370 aa10.68□□□□□ -0.7
CPSF4-202ENST00000412686 UNC5CLQ8IV45 518 aa10.67□□□□□ -0.7
CPSF4-202ENST00000412686 TRPC5Q9UL62 973 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-202ENST00000412686 KCNH5Q8NCM2 988 aa10.66□□□□□ -0.7
CPSF4-202ENST00000412686 STRN4Q9NRL3 753 aa10.66□□□□□ -0.7
CPSF4-202ENST00000412686 RGS12O14924 1447 aa10.66□□□□□ -0.7
CPSF4-202ENST00000412686 ANKRD26Q9UPS8 1709 aa10.65□□□□□ -0.7
CPSF4-202ENST00000412686 RXRBP28702 533 aa10.65□□□□□ -0.7
CPSF4-202ENST00000412686 ARHGEF25Q86VW2 580 aa10.65□□□□□ -0.7
CPSF4-202ENST00000412686 COG3Q96JB2 828 aa10.65□□□□□ -0.7
CPSF4-202ENST00000412686 AXIN2Q9Y2T1 843 aa10.65□□□□□ -0.7
CPSF4-202ENST00000412686 COL5A2P05997 1499 aaPredicted RBP10.65□□□□□ -0.7
CPSF4-202ENST00000412686 ZEB1P37275 1124 aaPredicted RBP10.64□□□□□ -0.71
CPSF4-202ENST00000412686 RBM6P78332 1123 aaKnown RBP10.64□□□□□ -0.71
CPSF4-202ENST00000412686 GJD4Q96KN9 370 aaPredicted RBP10.64□□□□□ -0.71
CPSF4-202ENST00000412686 CCDC9Q9Y3X0 531 aaKnown RBP10.64□□□□□ -0.71
CPSF4-202ENST00000412686 AATKQ6ZMQ8 1374 aa10.64□□□□□ -0.71
CPSF4-202ENST00000412686 RRS1Q15050 365 aaKnown RBP10.63□□□□□ -0.71
CPSF4-202ENST00000412686 VPS72Q15906 364 aa10.63□□□□□ -0.71
CPSF4-202ENST00000412686 LARP1Q6PKG0 1096 aaKnown RBP10.63□□□□□ -0.71
CPSF4-202ENST00000412686 PEAK1Q9H792 1746 aa10.63□□□□□ -0.71
CPSF4-202ENST00000412686 CGNL1Q0VF96 1302 aa10.62□□□□□ -0.71
CPSF4-202ENST00000412686 MAP3K19Q56UN5 1328 aa10.62□□□□□ -0.71
CPSF4-202ENST00000412686 USP35Q9P2H5 1018 aa10.62□□□□□ -0.71
CPSF4-202ENST00000412686 BRWD3Q6RI45 1802 aa10.61□□□□□ -0.71
CPSF4-202ENST00000412686 EVA1CP58658 441 aa10.61□□□□□ -0.71
CPSF4-202ENST00000412686 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-202ENST00000412686 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-202ENST00000412686 SPATA31A5Q5VU36 1347 aa10.6□□□□□ -0.71
CPSF4-202ENST00000412686 SPATA31A7Q8IWB4 1347 aa10.6□□□□□ -0.71
CPSF4-202ENST00000412686 ABCC6O95255 1503 aa10.6□□□□□ -0.71
CPSF4-202ENST00000412686 PER1O15534 1290 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-202ENST00000412686 TNNT2P45379 298 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-202ENST00000412686 FAM98CQ17RN3 349 aaKnown RBP10.6□□□□□ -0.71
CPSF4-202ENST00000412686 AMER1Q5JTC6 1135 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-202ENST00000412686 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-202ENST00000412686 RGPD2P0DJD1 1756 aa10.6□□□□□ -0.71
CPSF4-202ENST00000412686 SPATA31A1Q5TZJ5 1347 aa10.59□□□□□ -0.71
CPSF4-202ENST00000412686 MAP2P11137 1827 aaKnown RBP10.59□□□□□ -0.71
CPSF4-202ENST00000412686 WNK3Q9BYP7 1800 aa10.59□□□□□ -0.71
CPSF4-202ENST00000412686 HOXC9P31274 260 aa10.59□□□□□ -0.71
CPSF4-202ENST00000412686 LTV1Q96GA3 475 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-202ENST00000412686 KNSTRNQ9Y448 316 aa10.59□□□□□ -0.71
CPSF4-202ENST00000412686 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
CPSF4-202ENST00000412686 THSD7AQ9UPZ6 1657 aa10.59□□□□□ -0.71
CPSF4-202ENST00000412686 CRB1P82279 1406 aa10.58□□□□□ -0.72
CPSF4-202ENST00000412686 CAPN15O75808 1086 aa10.58□□□□□ -0.72
CPSF4-202ENST00000412686 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
CPSF4-202ENST00000412686 AMPHP49418 695 aa10.58□□□□□ -0.72
CPSF4-202ENST00000412686 CC2D1BQ5T0F9 858 aaKnown RBP10.58□□□□□ -0.72
CPSF4-202ENST00000412686 TOM1L2Q6ZVM7 507 aa10.58□□□□□ -0.72
CPSF4-202ENST00000412686 SEPT12Q8IYM1 358 aa10.58□□□□□ -0.72
CPSF4-202ENST00000412686 IP6K1Q92551 441 aa10.58□□□□□ -0.72
CPSF4-202ENST00000412686 ERBB3P21860 1342 aa10.58□□□□□ -0.72
CPSF4-202ENST00000412686 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.72
CPSF4-202ENST00000412686 NSD2O96028 1365 aa10.57□□□□□ -0.72
CPSF4-202ENST00000412686 A0A0G2JS52 829 aa10.57□□□□□ -0.72
CPSF4-202ENST00000412686 MYT1Q01538 1121 aa10.57□□□□□ -0.72
CPSF4-202ENST00000412686 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
CPSF4-202ENST00000412686 BLMP54132 1417 aaPredicted RBP10.57□□□□□ -0.72
CPSF4-202ENST00000412686 PPM1GO15355 546 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-202ENST00000412686 HSP90AB2PQ58FF8 381 aa10.56□□□□□ -0.72
CPSF4-202ENST00000412686 MORC1Q86VD1 984 aa10.56□□□□□ -0.72
CPSF4-202ENST00000412686 LRRC37A3O60309 1634 aa10.55□□□□□ -0.72
CPSF4-202ENST00000412686 RTL1A6NKG5 1358 aa10.55□□□□□ -0.72
CPSF4-202ENST00000412686 FLT4P35916 1363 aa10.55□□□□□ -0.72
CPSF4-202ENST00000412686 FAM208AQ9UK61 1670 aaKnown RBP10.55□□□□□ -0.72
CPSF4-202ENST00000412686 ONECUT3O60422 494 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-202ENST00000412686 TCP11L2Q8N4U5 519 aa10.55□□□□□ -0.72
CPSF4-202ENST00000412686 POLKQ9UBT6 870 aa10.55□□□□□ -0.72
CPSF4-202ENST00000412686 SOCS7O14512 581 aa10.54□□□□□ -0.72
CPSF4-202ENST00000412686 ATXN8OSP0DMR3 200 aa10.54□□□□□ -0.72
CPSF4-202ENST00000412686 DDX10Q13206 875 aaKnown RBP10.54□□□□□ -0.72
CPSF4-202ENST00000412686 FAM182BQ5T319 152 aa10.54□□□□□ -0.72
CPSF4-202ENST00000412686 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
CPSF4-202ENST00000412686 NLRP2Q9NX02 1062 aa10.54□□□□□ -0.72
CPSF4-202ENST00000412686 PARP4Q9UKK3 1724 aaKnown RBP10.54□□□□□ -0.72
CPSF4-202ENST00000412686 INSRP06213 1382 aa10.53□□□□□ -0.72
CPSF4-202ENST00000412686 DISP2A7MBM2 1401 aa10.53□□□□□ -0.72
CPSF4-202ENST00000412686 SMG6Q86US8 1419 aaKnown RBP10.53□□□□□ -0.72
CPSF4-202ENST00000412686 USHBP1Q8N6Y0 703 aa10.53□□□□□ -0.72
CPSF4-202ENST00000412686 CARD10Q9BWT7 1032 aa10.53□□□□□ -0.72
CPSF4-202ENST00000412686 ZNF219Q9P2Y4 722 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-202ENST00000412686 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
CPSF4-202ENST00000412686 KIF24Q5T7B8 1368 aa10.52□□□□□ -0.73
CPSF4-202ENST00000412686 NPC1L1Q9UHC9 1359 aa10.52□□□□□ -0.73
CPSF4-202ENST00000412686 NBPF6Q5VWK0 638 aa10.51□□□□□ -0.73
CPSF4-202ENST00000412686 KRT27Q7Z3Y8 459 aa10.51□□□□□ -0.73
CPSF4-202ENST00000412686 NBPF4Q96M43 638 aa10.51□□□□□ -0.73
CPSF4-202ENST00000412686 MEGF6O75095 1541 aa10.5□□□□□ -0.73
CPSF4-202ENST00000412686 EIF4A2Q14240 407 aaKnown RBP10.5□□□□□ -0.73
CPSF4-202ENST00000412686 SHANK3Q9BYB0 1731 aa10.5□□□□□ -0.73
CPSF4-202ENST00000412686 MTHFSP49914 203 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms