RNA–Protein interactions for RNA: ENST00000412585.6

HLA-B-249, Transcript of major histocompatibility complex, class I, B, humanhuman

APPRIS P1 BASIC

Gene HLA-B, Length 1,547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-249ENST00000412585 ARHGEF25Q86VW2 580 aa22.34■■□□□ 1.17
HLA-B-249ENST00000412585 EMILIN1Q9Y6C2 1016 aa22.34■■□□□ 1.17
HLA-B-249ENST00000412585 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
HLA-B-249ENST00000412585 COL18A1P39060 1754 aa22.33■■□□□ 1.17
HLA-B-249ENST00000412585 MTHFSP49914 203 aa22.33■■□□□ 1.17
HLA-B-249ENST00000412585 CFAP53Q96M91 514 aa22.33■■□□□ 1.17
HLA-B-249ENST00000412585 SUPT16HQ9Y5B9 1047 aaKnown RBP22.32■■□□□ 1.16
HLA-B-249ENST00000412585 LMO7Q8WWI1 1683 aa22.32■■□□□ 1.16
HLA-B-249ENST00000412585 LRP6O75581 1613 aa22.31■■□□□ 1.16
HLA-B-249ENST00000412585 NWD2Q9ULI1 1742 aa22.31■■□□□ 1.16
HLA-B-249ENST00000412585 BLMP54132 1417 aaPredicted RBP22.31■■□□□ 1.16
HLA-B-249ENST00000412585 ADAMTS2O95450 1211 aa22.31■■□□□ 1.16
HLA-B-249ENST00000412585 FAM208AQ9UK61 1670 aaKnown RBP22.3■■□□□ 1.16
HLA-B-249ENST00000412585 HOXC9P31274 260 aa22.28■■□□□ 1.16
HLA-B-249ENST00000412585 CHRNA2Q15822 529 aa22.28■■□□□ 1.16
HLA-B-249ENST00000412585 IP6K1Q92551 441 aa22.28■■□□□ 1.16
HLA-B-249ENST00000412585 INSRP06213 1382 aa22.27■■□□□ 1.16
HLA-B-249ENST00000412585 CCDC184Q52MB2 194 aa22.27■■□□□ 1.16
HLA-B-249ENST00000412585 MEX3CQ5U5Q3 659 aaKnown RBP22.27■■□□□ 1.16
HLA-B-249ENST00000412585 COL3A1P02461 1466 aaPredicted RBP22.26■■□□□ 1.15
HLA-B-249ENST00000412585 MRS2Q9HD23 443 aa22.25■■□□□ 1.15
HLA-B-249ENST00000412585 NRAPQ86VF7 1730 aa22.25■■□□□ 1.15
HLA-B-249ENST00000412585 HSP90AB2PQ58FF8 381 aa22.24■■□□□ 1.15
HLA-B-249ENST00000412585 CAMTA1Q9Y6Y1 1673 aa22.24■■□□□ 1.15
HLA-B-249ENST00000412585 FAM83GA6ND36 823 aa22.23■■□□□ 1.15
HLA-B-249ENST00000412585 COL5A2P05997 1499 aaPredicted RBP22.22■■□□□ 1.15
HLA-B-249ENST00000412585 C8orf37Q96NL8 207 aa22.22■■□□□ 1.15
HLA-B-249ENST00000412585 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.22■■□□□ 1.15
HLA-B-249ENST00000412585 RGPD2P0DJD1 1756 aa22.21■■□□□ 1.15
HLA-B-249ENST00000412585 DIAPH1O60610 1272 aaKnown RBP22.21■■□□□ 1.15
HLA-B-249ENST00000412585 NGLY1Q96IV0 654 aa22.21■■□□□ 1.15
HLA-B-249ENST00000412585 ERBB3P21860 1342 aa22.2■■□□□ 1.15
HLA-B-249ENST00000412585 SLIT2O94813 1529 aa22.2■■□□□ 1.14
HLA-B-249ENST00000412585 LTV1Q96GA3 475 aaPredicted RBP22.2■■□□□ 1.14
HLA-B-249ENST00000412585 BTG4Q9NY30 223 aa22.2■■□□□ 1.14
HLA-B-249ENST00000412585 NUDCQ9Y266 331 aa22.2■■□□□ 1.14
HLA-B-249ENST00000412585 AXIN2Q9Y2T1 843 aa22.2■■□□□ 1.14
HLA-B-249ENST00000412585 RGPD1P0DJD0 1748 aa22.19■■□□□ 1.14
HLA-B-249ENST00000412585 CSB-PGBD3P0DP91 1061 aa22.19■■□□□ 1.14
HLA-B-249ENST00000412585 ANKRD24Q8TF21 1146 aa22.19■■□□□ 1.14
HLA-B-249ENST00000412585 EVA1CP58658 441 aa22.18■■□□□ 1.14
HLA-B-249ENST00000412585 EIF4A2Q14240 407 aaKnown RBP22.18■■□□□ 1.14
HLA-B-249ENST00000412585 WDR43Q15061 677 aaKnown RBP eCLIP22.16■■□□□ 1.14
HLA-B-249ENST00000412585 ILDR1Q86SU0 546 aaPredicted RBP22.16■■□□□ 1.14
HLA-B-249ENST00000412585 STRN4Q9NRL3 753 aa22.16■■□□□ 1.14
HLA-B-249ENST00000412585 WDR17Q8IZU2 1322 aa22.16■■□□□ 1.14
HLA-B-249ENST00000412585 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
HLA-B-249ENST00000412585 IL13P35225 146 aa22.15■■□□□ 1.14
HLA-B-249ENST00000412585 FNBP4Q8N3X1 1017 aaPredicted RBP22.13■■□□□ 1.13
HLA-B-249ENST00000412585 CRB1P82279 1406 aa22.13■■□□□ 1.13
HLA-B-249ENST00000412585 TOM1L2Q6ZVM7 507 aa22.12■■□□□ 1.13
HLA-B-249ENST00000412585 AFF2P51816 1311 aa22.12■■□□□ 1.13
HLA-B-249ENST00000412585 UNC5CLQ8IV45 518 aa22.11■■□□□ 1.13
HLA-B-249ENST00000412585 NLRP2Q9NX02 1062 aa22.11■■□□□ 1.13
HLA-B-249ENST00000412585 USP21Q9UK80 565 aa22.11■■□□□ 1.13
HLA-B-249ENST00000412585 WNK3Q9BYP7 1800 aa22.11■■□□□ 1.13
HLA-B-249ENST00000412585 BCL9LQ86UU0 1499 aa22.11■■□□□ 1.13
HLA-B-249ENST00000412585 U2AF1L5P0DN76 240 aaPredicted RBP22.11■■□□□ 1.13
HLA-B-249ENST00000412585 U2AF1Q01081 240 aaKnown RBP eCLIP22.11■■□□□ 1.13
HLA-B-249ENST00000412585 IGSF1Q8N6C5 1336 aa22.1■■□□□ 1.13
HLA-B-249ENST00000412585 LARP1Q6PKG0 1096 aaKnown RBP22.09■■□□□ 1.13
HLA-B-249ENST00000412585 PNISRQ8TF01 805 aaKnown RBP22.09■■□□□ 1.13
HLA-B-249ENST00000412585 EYA1Q99502 592 aa22.09■■□□□ 1.13
HLA-B-249ENST00000412585 PARP4Q9UKK3 1724 aaKnown RBP22.09■■□□□ 1.13
HLA-B-249ENST00000412585 FAM9BQ8IZU0 186 aa22.08■■□□□ 1.13
HLA-B-249ENST00000412585 NCAPD2Q15021 1401 aa22.08■■□□□ 1.12
HLA-B-249ENST00000412585 HNRNPUQ00839 825 aaKnown RBP eCLIP22.07■■□□□ 1.12
HLA-B-249ENST00000412585 NBPF6Q5VWK0 638 aa22.06■■□□□ 1.12
HLA-B-249ENST00000412585 NBPF4Q96M43 638 aa22.06■■□□□ 1.12
HLA-B-249ENST00000412585 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
HLA-B-249ENST00000412585 CCDC9Q9Y3X0 531 aaKnown RBP22.06■■□□□ 1.12
HLA-B-249ENST00000412585 KDRP35968 1356 aa22.06■■□□□ 1.12
HLA-B-249ENST00000412585 SULT6B1Q6IMI4 303 aa22.06■■□□□ 1.12
HLA-B-249ENST00000412585 HMOX1P09601 288 aa22.05■■□□□ 1.12
HLA-B-249ENST00000412585 VPS72Q15906 364 aa22.05■■□□□ 1.12
HLA-B-249ENST00000412585 PNNQ9H307 717 aaKnown RBP22.05■■□□□ 1.12
HLA-B-249ENST00000412585 ZBED9Q6R2W3 1325 aa22.04■■□□□ 1.12
HLA-B-249ENST00000412585 ZNF772Q68DY9 489 aaPredicted RBP22.04■■□□□ 1.12
HLA-B-249ENST00000412585 USHBP1Q8N6Y0 703 aa22.04■■□□□ 1.12
HLA-B-249ENST00000412585 NEFMP07197 916 aa22.03■■□□□ 1.12
HLA-B-249ENST00000412585 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
HLA-B-249ENST00000412585 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
HLA-B-249ENST00000412585 TRPC5Q9UL62 973 aaPredicted RBP22.03■■□□□ 1.12
HLA-B-249ENST00000412585 ATRNO75882 1429 aa22.02■■□□□ 1.12
HLA-B-249ENST00000412585 ADAMTS8Q9UP79 889 aa22.02■■□□□ 1.12
HLA-B-249ENST00000412585 SPATA31A5Q5VU36 1347 aa22.02■■□□□ 1.12
HLA-B-249ENST00000412585 SPATA31A7Q8IWB4 1347 aa22.02■■□□□ 1.12
HLA-B-249ENST00000412585 FCHSD2O94868 740 aa22.01■■□□□ 1.11
HLA-B-249ENST00000412585 AEBP1Q8IUX7 1158 aa22.01■■□□□ 1.11
HLA-B-249ENST00000412585 SPATA31A1Q5TZJ5 1347 aa22.01■■□□□ 1.11
HLA-B-249ENST00000412585 TCP11L2Q8N4U5 519 aa22.01■■□□□ 1.11
HLA-B-249ENST00000412585 RAPGEF4Q8WZA2 1011 aa22.01■■□□□ 1.11
HLA-B-249ENST00000412585 THRAP3Q9Y2W1 955 aaKnown RBP22.01■■□□□ 1.11
HLA-B-249ENST00000412585 RSPH6AQ9H0K4 717 aa22■■□□□ 1.11
HLA-B-249ENST00000412585 MAPK8IP3Q9UPT6 1336 aa22■■□□□ 1.11
HLA-B-249ENST00000412585 PLEKHG2Q9H7P9 1386 aa21.99■■□□□ 1.11
HLA-B-249ENST00000412585 PRKAR2BP31323 418 aa21.99■■□□□ 1.11
HLA-B-249ENST00000412585 PKD1L3Q7Z443 1732 aa21.99■■□□□ 1.11
HLA-B-249ENST00000412585 GLI3P10071 1580 aa21.98■■□□□ 1.11
HLA-B-249ENST00000412585 FKBP8Q14318 412 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms