RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 BLMP54132 1417 aaPredicted RBP11.31□□□□□ -0.6
RPE-204ENST00000411934 WASHC2AQ641Q2 1341 aa11.31□□□□□ -0.6
RPE-204ENST00000411934 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
RPE-204ENST00000411934 POTEAQ6S8J7 498 aa11.3□□□□□ -0.6
RPE-204ENST00000411934 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
RPE-204ENST00000411934 CAMTA1Q9Y6Y1 1673 aa11.3□□□□□ -0.6
RPE-204ENST00000411934 GLI3P10071 1580 aa11.29□□□□□ -0.6
RPE-204ENST00000411934 RXRBP28702 533 aa11.29□□□□□ -0.6
RPE-204ENST00000411934 ZC3H6P61129 1189 aaKnown RBP11.29□□□□□ -0.6
RPE-204ENST00000411934 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
RPE-204ENST00000411934 PANK3Q9H999 370 aa11.29□□□□□ -0.6
RPE-204ENST00000411934 BTG4Q9NY30 223 aa11.29□□□□□ -0.6
RPE-204ENST00000411934 GJD4Q96KN9 370 aaPredicted RBP11.28□□□□□ -0.6
RPE-204ENST00000411934 KNSTRNQ9Y448 316 aa11.28□□□□□ -0.6
RPE-204ENST00000411934 CRB1P82279 1406 aa11.27□□□□□ -0.6
RPE-204ENST00000411934 SMG6Q86US8 1419 aaKnown RBP11.27□□□□□ -0.6
RPE-204ENST00000411934 THRAP3Q9Y2W1 955 aaKnown RBP11.27□□□□□ -0.61
RPE-204ENST00000411934 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.61
RPE-204ENST00000411934 RGS12O14924 1447 aa11.26□□□□□ -0.61
RPE-204ENST00000411934 GGNBP2Q9H3C7 697 aa11.26□□□□□ -0.61
RPE-204ENST00000411934 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
RPE-204ENST00000411934 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
RPE-204ENST00000411934 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
RPE-204ENST00000411934 WDR17Q8IZU2 1322 aa11.26□□□□□ -0.61
RPE-204ENST00000411934 FLT4P35916 1363 aa11.26□□□□□ -0.61
RPE-204ENST00000411934 WNK3Q9BYP7 1800 aa11.25□□□□□ -0.61
RPE-204ENST00000411934 PER1O15534 1290 aaPredicted RBP11.25□□□□□ -0.61
RPE-204ENST00000411934 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
RPE-204ENST00000411934 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
RPE-204ENST00000411934 CHRNA2Q15822 529 aa11.25□□□□□ -0.61
RPE-204ENST00000411934 ERBB3P21860 1342 aa11.25□□□□□ -0.61
RPE-204ENST00000411934 SPATA31A1Q5TZJ5 1347 aa11.25□□□□□ -0.61
RPE-204ENST00000411934 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
RPE-204ENST00000411934 BARGINQ6ZT62 677 aa11.24□□□□□ -0.61
RPE-204ENST00000411934 IP6K1Q92551 441 aa11.24□□□□□ -0.61
RPE-204ENST00000411934 MAP3K19Q56UN5 1328 aa11.24□□□□□ -0.61
RPE-204ENST00000411934 PARP4Q9UKK3 1724 aaKnown RBP11.23□□□□□ -0.61
RPE-204ENST00000411934 RGPD5Q99666 1765 aa11.23□□□□□ -0.61
RPE-204ENST00000411934 EVA1CP58658 441 aa11.23□□□□□ -0.61
RPE-204ENST00000411934 INSRP06213 1382 aa11.23□□□□□ -0.61
RPE-204ENST00000411934 PLEKHG2Q9H7P9 1386 aa11.23□□□□□ -0.61
RPE-204ENST00000411934 HOXC9P31274 260 aa11.22□□□□□ -0.61
RPE-204ENST00000411934 ILDR2Q71H61 639 aa11.22□□□□□ -0.61
RPE-204ENST00000411934 TCP11L2Q8N4U5 519 aa11.22□□□□□ -0.61
RPE-204ENST00000411934 CDCA7Q9BWT1 371 aaPredicted RBP11.22□□□□□ -0.61
RPE-204ENST00000411934 PEAK1Q9H792 1746 aa11.22□□□□□ -0.61
RPE-204ENST00000411934 MAP2P11137 1827 aaKnown RBP11.21□□□□□ -0.61
RPE-204ENST00000411934 SOX12O15370 315 aa11.21□□□□□ -0.61
RPE-204ENST00000411934 DSG3P32926 999 aa11.21□□□□□ -0.61
RPE-204ENST00000411934 AMPHP49418 695 aa11.21□□□□□ -0.61
RPE-204ENST00000411934 CARD10Q9BWT7 1032 aa11.21□□□□□ -0.61
RPE-204ENST00000411934 STRN4Q9NRL3 753 aa11.21□□□□□ -0.61
RPE-204ENST00000411934 AXIN2Q9Y2T1 843 aa11.21□□□□□ -0.61
RPE-204ENST00000411934 CCDC9Q9Y3X0 531 aaKnown RBP11.21□□□□□ -0.61
RPE-204ENST00000411934 DISP2A7MBM2 1401 aa11.2□□□□□ -0.62
RPE-204ENST00000411934 NCAPD2Q15021 1401 aa11.2□□□□□ -0.62
RPE-204ENST00000411934 CAPN15O75808 1086 aa11.2□□□□□ -0.62
RPE-204ENST00000411934 LARP1Q6PKG0 1096 aaKnown RBP11.2□□□□□ -0.62
RPE-204ENST00000411934 ZBTB7CA1YPR0 619 aa11.19□□□□□ -0.62
RPE-204ENST00000411934 RRS1Q15050 365 aaKnown RBP11.19□□□□□ -0.62
RPE-204ENST00000411934 TOM1L2Q6ZVM7 507 aa11.19□□□□□ -0.62
RPE-204ENST00000411934 MORC1Q86VD1 984 aa11.19□□□□□ -0.62
RPE-204ENST00000411934 ANKRD24Q8TF21 1146 aa11.19□□□□□ -0.62
RPE-204ENST00000411934 LRRC37A3O60309 1634 aa11.19□□□□□ -0.62
RPE-204ENST00000411934 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
RPE-204ENST00000411934 POLKQ9UBT6 870 aa11.18□□□□□ -0.62
RPE-204ENST00000411934 BRWD3Q6RI45 1802 aa11.17□□□□□ -0.62
RPE-204ENST00000411934 SOCS7O14512 581 aa11.17□□□□□ -0.62
RPE-204ENST00000411934 FAM98CQ17RN3 349 aaKnown RBP11.17□□□□□ -0.62
RPE-204ENST00000411934 SEPT12Q8IYM1 358 aa11.17□□□□□ -0.62
RPE-204ENST00000411934 EMILIN1Q9Y6C2 1016 aa11.17□□□□□ -0.62
RPE-204ENST00000411934 BCL9O00512 1426 aa11.17□□□□□ -0.62
RPE-204ENST00000411934 TNS2Q63HR2 1409 aa11.17□□□□□ -0.62
RPE-204ENST00000411934 KRT27Q7Z3Y8 459 aa11.15□□□□□ -0.62
RPE-204ENST00000411934 PARD3Q8TEW0 1356 aa11.15□□□□□ -0.63
RPE-204ENST00000411934 IL2RBP14784 551 aa11.14□□□□□ -0.63
RPE-204ENST00000411934 HSP90AB2PQ58FF8 381 aa11.14□□□□□ -0.63
RPE-204ENST00000411934 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
RPE-204ENST00000411934 RGPD1P0DJD0 1748 aa11.14□□□□□ -0.63
RPE-204ENST00000411934 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
RPE-204ENST00000411934 A0A0G2JS52 829 aa11.13□□□□□ -0.63
RPE-204ENST00000411934 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
RPE-204ENST00000411934 FBLN1P23142 703 aa11.13□□□□□ -0.63
RPE-204ENST00000411934 MYT1Q01538 1121 aa11.13□□□□□ -0.63
RPE-204ENST00000411934 CC2D1BQ5T0F9 858 aaKnown RBP11.13□□□□□ -0.63
RPE-204ENST00000411934 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
RPE-204ENST00000411934 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
RPE-204ENST00000411934 RGPD2P0DJD1 1756 aa11.13□□□□□ -0.63
RPE-204ENST00000411934 PKD1L3Q7Z443 1732 aa11.12□□□□□ -0.63
RPE-204ENST00000411934 IGSF1Q8N6C5 1336 aa11.12□□□□□ -0.63
RPE-204ENST00000411934 DDB1Q16531 1140 aa11.12□□□□□ -0.63
RPE-204ENST00000411934 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
RPE-204ENST00000411934 PPM1GO15355 546 aaPredicted RBP11.11□□□□□ -0.63
RPE-204ENST00000411934 TNNT2P45379 298 aaPredicted RBP11.11□□□□□ -0.63
RPE-204ENST00000411934 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
RPE-204ENST00000411934 RALBP1Q15311 655 aa11.11□□□□□ -0.63
RPE-204ENST00000411934 KDRP35968 1356 aa11.11□□□□□ -0.63
RPE-204ENST00000411934 MEGF6O75095 1541 aa11.1□□□□□ -0.63
RPE-204ENST00000411934 MTHFSP49914 203 aa11.1□□□□□ -0.63
RPE-204ENST00000411934 EIF4A2Q14240 407 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms