RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 DESI1Q6ICB0 168 aa5.85□□□□□ -1.47
RNU6-1140P-201ENST00000410517 VASH1Q7L8A9 365 aaPredicted RBP5.85□□□□□ -1.47
RNU6-1140P-201ENST00000410517 GPIHBP1Q8IV16 184 aa5.85□□□□□ -1.47
RNU6-1140P-201ENST00000410517 CCDC116Q8IYX3 515 aa5.85□□□□□ -1.47
RNU6-1140P-201ENST00000410517 BCANQ96GW7 911 aa5.85□□□□□ -1.47
RNU6-1140P-201ENST00000410517 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
RNU6-1140P-201ENST00000410517 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
RNU6-1140P-201ENST00000410517 TSHZ2Q9NRE2 1034 aa5.85□□□□□ -1.47
RNU6-1140P-201ENST00000410517 NDUFV2P19404 249 aa5.84□□□□□ -1.47
RNU6-1140P-201ENST00000410517 CTSOP43234 321 aaPredicted RBP5.84□□□□□ -1.47
RNU6-1140P-201ENST00000410517 MAP10Q9P2G4 905 aa5.84□□□□□ -1.47
RNU6-1140P-201ENST00000410517 SENP3-EIF4A1A0A087X0R7 540 aa5.83□□□□□ -1.48
RNU6-1140P-201ENST00000410517 MTMR2Q13614 643 aa5.83□□□□□ -1.48
RNU6-1140P-201ENST00000410517 LYPD8Q6UX82 237 aa5.83□□□□□ -1.48
RNU6-1140P-201ENST00000410517 MBIPQ9NS73 344 aa5.83□□□□□ -1.48
RNU6-1140P-201ENST00000410517 FAM217BQ9NTX9 383 aaPredicted RBP5.83□□□□□ -1.48
RNU6-1140P-201ENST00000410517 IGF1RP08069 1367 aa5.82□□□□□ -1.48
RNU6-1140P-201ENST00000410517 SPDYE5A6NIY4 337 aa5.82□□□□□ -1.48
RNU6-1140P-201ENST00000410517 MAP2K5Q13163 448 aa5.82□□□□□ -1.48
RNU6-1140P-201ENST00000410517 INSM2Q96T92 566 aaPredicted RBP5.82□□□□□ -1.48
RNU6-1140P-201ENST00000410517 POLMQ9NP87 494 aaPredicted RBP5.82□□□□□ -1.48
RNU6-1140P-201ENST00000410517 GPCPD1Q9NPB8 672 aa5.82□□□□□ -1.48
RNU6-1140P-201ENST00000410517 CUEDC1Q9NWM3 386 aaPredicted RBP5.82□□□□□ -1.48
RNU6-1140P-201ENST00000410517 IRF6O14896 467 aa5.81□□□□□ -1.48
RNU6-1140P-201ENST00000410517 PPP1R26Q5T8A7 1209 aaPredicted RBP5.81□□□□□ -1.48
RNU6-1140P-201ENST00000410517 Q6ZVU0 165 aa5.81□□□□□ -1.48
RNU6-1140P-201ENST00000410517 ACDQ96AP0 544 aa5.81□□□□□ -1.48
RNU6-1140P-201ENST00000410517 AGBL1Q96MI9 1066 aa5.81□□□□□ -1.48
RNU6-1140P-201ENST00000410517 PGPEP1Q9NXJ5 209 aa5.81□□□□□ -1.48
RNU6-1140P-201ENST00000410517 MAP4K5Q9Y4K4 846 aa5.81□□□□□ -1.48
RNU6-1140P-201ENST00000410517 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
RNU6-1140P-201ENST00000410517 CLCN1P35523 988 aa5.8□□□□□ -1.48
RNU6-1140P-201ENST00000410517 RELBQ01201 579 aa5.8□□□□□ -1.48
RNU6-1140P-201ENST00000410517 ZMYM1Q5SVZ6 1142 aa5.8□□□□□ -1.48
RNU6-1140P-201ENST00000410517 C1QTNF2Q9BXJ5 285 aa5.8□□□□□ -1.48
RNU6-1140P-201ENST00000410517 MOXD2PA6NHM9 499 aa5.79□□□□□ -1.48
RNU6-1140P-201ENST00000410517 GPR25O00155 361 aa5.79□□□□□ -1.48
RNU6-1140P-201ENST00000410517 SNRPNP63162 240 aaKnown RBP5.79□□□□□ -1.48
RNU6-1140P-201ENST00000410517 FOXR1Q6PIV2 292 aa5.79□□□□□ -1.48
RNU6-1140P-201ENST00000410517 KRI1Q8N9T8 703 aaKnown RBP5.79□□□□□ -1.48
RNU6-1140P-201ENST00000410517 RNF217Q8TC41 542 aa5.79□□□□□ -1.48
RNU6-1140P-201ENST00000410517 SPIRE2Q8WWL2 714 aa5.79□□□□□ -1.48
RNU6-1140P-201ENST00000410517 MAGEB6P1A0A0J9YX57 407 aa5.78□□□□□ -1.48
RNU6-1140P-201ENST00000410517 F12P00748 615 aaPredicted RBP5.78□□□□□ -1.48
RNU6-1140P-201ENST00000410517 SEMA6BQ9H3T3 888 aa5.78□□□□□ -1.48
RNU6-1140P-201ENST00000410517 ITGB7P26010 798 aa5.77□□□□□ -1.49
RNU6-1140P-201ENST00000410517 COL8A1P27658 744 aa5.77□□□□□ -1.49
RNU6-1140P-201ENST00000410517 ALYREFQ86V81 257 aaKnown RBP5.77□□□□□ -1.49
RNU6-1140P-201ENST00000410517 ZNF395Q9H8N7 513 aaPredicted RBP5.77□□□□□ -1.49
RNU6-1140P-201ENST00000410517 SCO2A0A1W2PP80 73 aa5.76□□□□□ -1.49
RNU6-1140P-201ENST00000410517 TRMT44Q8IYL2 757 aaKnown RBP5.76□□□□□ -1.49
RNU6-1140P-201ENST00000410517 ZNF837Q96EG3 531 aaPredicted RBP5.76□□□□□ -1.49
RNU6-1140P-201ENST00000410517 MKL2Q9ULH7 1088 aa5.76□□□□□ -1.49
RNU6-1140P-201ENST00000410517 CFAP99D6REC4 459 aa5.75□□□□□ -1.49
RNU6-1140P-201ENST00000410517 OIP5O43482 229 aa5.75□□□□□ -1.49
RNU6-1140P-201ENST00000410517 GRIN2CQ14957 1233 aa5.75□□□□□ -1.49
RNU6-1140P-201ENST00000410517 CARD14Q9BXL6 1004 aa5.75□□□□□ -1.49
RNU6-1140P-201ENST00000410517 RRAGCQ9HB90 399 aa5.75□□□□□ -1.49
RNU6-1140P-201ENST00000410517 LRRC4BQ9NT99 713 aa5.75□□□□□ -1.49
RNU6-1140P-201ENST00000410517 MINK1Q8N4C8 1332 aaPredicted RBP5.74□□□□□ -1.49
RNU6-1140P-201ENST00000410517 C1QTNF9BB2RNN3 333 aa5.74□□□□□ -1.49
RNU6-1140P-201ENST00000410517 PRPF38BQ5VTL8 546 aaKnown RBP5.74□□□□□ -1.49
RNU6-1140P-201ENST00000410517 TRIM22Q8IYM9 498 aa5.74□□□□□ -1.49
RNU6-1140P-201ENST00000410517 ARMC2Q8NEN0 867 aa5.74□□□□□ -1.49
RNU6-1140P-201ENST00000410517 RIPOR1Q6ZS17 1223 aa5.73□□□□□ -1.49
RNU6-1140P-201ENST00000410517 LYSMD3Q7Z3D4 306 aa5.73□□□□□ -1.49
RNU6-1140P-201ENST00000410517 GTPBP3Q969Y2 492 aaKnown RBP5.73□□□□□ -1.49
RNU6-1140P-201ENST00000410517 CCDC102AQ96A19 550 aa5.73□□□□□ -1.49
RNU6-1140P-201ENST00000410517 GMCL1Q96IK5 515 aa5.73□□□□□ -1.49
RNU6-1140P-201ENST00000410517 NSFL1CQ9UNZ2 370 aaKnown RBP5.73□□□□□ -1.49
RNU6-1140P-201ENST00000410517 PER1O15534 1290 aaPredicted RBP5.72□□□□□ -1.49
RNU6-1140P-201ENST00000410517 RHOQP17081 205 aa5.72□□□□□ -1.49
RNU6-1140P-201ENST00000410517 MX2P20592 715 aa5.72□□□□□ -1.49
RNU6-1140P-201ENST00000410517 SSTR3P32745 418 aaPredicted RBP5.72□□□□□ -1.49
RNU6-1140P-201ENST00000410517 DBN1Q16643 649 aa5.72□□□□□ -1.49
RNU6-1140P-201ENST00000410517 NBPF14Q5TI25 921 aa5.72□□□□□ -1.49
RNU6-1140P-201ENST00000410517 FOXD4L5Q5VV16 416 aaPredicted RBP5.72□□□□□ -1.49
RNU6-1140P-201ENST00000410517 SH3BP5LQ7L8J4 393 aa5.72□□□□□ -1.49
RNU6-1140P-201ENST00000410517 TRERF1Q96PN7 1200 aa5.72□□□□□ -1.49
RNU6-1140P-201ENST00000410517 DHX9Q08211 1270 aaKnown RBP5.71□□□□□ -1.5
RNU6-1140P-201ENST00000410517 DOC2BQ14184 412 aa5.71□□□□□ -1.5
RNU6-1140P-201ENST00000410517 ERFEQ4G0M1 354 aa5.71□□□□□ -1.5
RNU6-1140P-201ENST00000410517 PRICKLE2Q7Z3G6 844 aa5.71□□□□□ -1.5
RNU6-1140P-201ENST00000410517 CD163Q86VB7 1156 aa5.71□□□□□ -1.5
RNU6-1140P-201ENST00000410517 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
RNU6-1140P-201ENST00000410517 SHISA8B8ZZ34 492 aa5.7□□□□□ -1.5
RNU6-1140P-201ENST00000410517 TSC1Q92574 1164 aa5.7□□□□□ -1.5
RNU6-1140P-201ENST00000410517 KCTD15Q96SI1 283 aaPredicted RBP5.7□□□□□ -1.5
RNU6-1140P-201ENST00000410517 OXCT2Q9BYC2 517 aaPredicted RBP5.7□□□□□ -1.5
RNU6-1140P-201ENST00000410517 SUV39H2Q9H5I1 410 aa5.7□□□□□ -1.5
RNU6-1140P-201ENST00000410517 GOLGA2P5Q9HBQ8 144 aa5.7□□□□□ -1.5
RNU6-1140P-201ENST00000410517 PCDHB15Q9Y5E8 787 aa5.7□□□□□ -1.5
RNU6-1140P-201ENST00000410517 HRCP23327 699 aa5.68□□□□□ -1.5
RNU6-1140P-201ENST00000410517 NBPF11Q86T75 865 aa5.68□□□□□ -1.5
RNU6-1140P-201ENST00000410517 ZBTB3Q9H5J0 574 aa5.68□□□□□ -1.5
RNU6-1140P-201ENST00000410517 H7C1W4 665 aa5.67□□□□□ -1.5
RNU6-1140P-201ENST00000410517 CHRNA4P43681 627 aa5.67□□□□□ -1.5
RNU6-1140P-201ENST00000410517 GAS2L1Q99501 681 aaPredicted RBP5.67□□□□□ -1.5
RNU6-1140P-201ENST00000410517 ZFP64Q9NPA5 681 aa5.67□□□□□ -1.5
RNU6-1140P-201ENST00000410517 TULP1O00294 542 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms