RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 RBM6P78332 1123 aaKnown RBP14.21□□□□□ -0.13
TSPAN9-202ENST00000407263 KCNH5Q8NCM2 988 aa14.21□□□□□ -0.13
TSPAN9-202ENST00000407263 COG3Q96JB2 828 aa14.21□□□□□ -0.13
TSPAN9-202ENST00000407263 LRRC37A3O60309 1634 aa14.21□□□□□ -0.13
TSPAN9-202ENST00000407263 PARP4Q9UKK3 1724 aaKnown RBP14.21□□□□□ -0.14
TSPAN9-202ENST00000407263 PELP1Q8IZL8 1130 aaKnown RBP14.2□□□□□ -0.14
TSPAN9-202ENST00000407263 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
TSPAN9-202ENST00000407263 WASHC2AQ641Q2 1341 aa14.19□□□□□ -0.14
TSPAN9-202ENST00000407263 VPS72Q15906 364 aa14.19□□□□□ -0.14
TSPAN9-202ENST00000407263 GJD4Q96KN9 370 aaPredicted RBP14.19□□□□□ -0.14
TSPAN9-202ENST00000407263 PANK3Q9H999 370 aa14.19□□□□□ -0.14
TSPAN9-202ENST00000407263 FYB1O15117 783 aa14.18□□□□□ -0.14
TSPAN9-202ENST00000407263 CGNL1Q0VF96 1302 aa14.17□□□□□ -0.14
TSPAN9-202ENST00000407263 A0A0G2JS52 829 aa14.17□□□□□ -0.14
TSPAN9-202ENST00000407263 ARHGEF25Q86VW2 580 aa14.17□□□□□ -0.14
TSPAN9-202ENST00000407263 FBLN1P23142 703 aa14.16□□□□□ -0.14
TSPAN9-202ENST00000407263 EVA1CP58658 441 aa14.16□□□□□ -0.14
TSPAN9-202ENST00000407263 LARP1Q6PKG0 1096 aaKnown RBP14.16□□□□□ -0.14
TSPAN9-202ENST00000407263 USP35Q9P2H5 1018 aa14.16□□□□□ -0.14
TSPAN9-202ENST00000407263 SPATA31A5Q5VU36 1347 aa14.15□□□□□ -0.14
TSPAN9-202ENST00000407263 SPATA31A7Q8IWB4 1347 aa14.15□□□□□ -0.14
TSPAN9-202ENST00000407263 CRB1P82279 1406 aa14.15□□□□□ -0.14
TSPAN9-202ENST00000407263 AXIN2Q9Y2T1 843 aa14.15□□□□□ -0.14
TSPAN9-202ENST00000407263 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
TSPAN9-202ENST00000407263 RRS1Q15050 365 aaKnown RBP14.14□□□□□ -0.15
TSPAN9-202ENST00000407263 FAM98CQ17RN3 349 aaKnown RBP14.14□□□□□ -0.15
TSPAN9-202ENST00000407263 BLMP54132 1417 aaPredicted RBP14.14□□□□□ -0.15
TSPAN9-202ENST00000407263 SPATA31A1Q5TZJ5 1347 aa14.14□□□□□ -0.15
TSPAN9-202ENST00000407263 SHANK3Q9BYB0 1731 aa14.13□□□□□ -0.15
TSPAN9-202ENST00000407263 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
TSPAN9-202ENST00000407263 NSD2O96028 1365 aa14.13□□□□□ -0.15
TSPAN9-202ENST00000407263 CSB-PGBD3P0DP91 1061 aa14.13□□□□□ -0.15
TSPAN9-202ENST00000407263 ZEB1P37275 1124 aaPredicted RBP14.13□□□□□ -0.15
TSPAN9-202ENST00000407263 WDR17Q8IZU2 1322 aa14.13□□□□□ -0.15
TSPAN9-202ENST00000407263 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
TSPAN9-202ENST00000407263 SOCS7O14512 581 aa14.11□□□□□ -0.15
TSPAN9-202ENST00000407263 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
TSPAN9-202ENST00000407263 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
TSPAN9-202ENST00000407263 TOM1L2Q6ZVM7 507 aa14.11□□□□□ -0.15
TSPAN9-202ENST00000407263 LTV1Q96GA3 475 aaPredicted RBP14.11□□□□□ -0.15
TSPAN9-202ENST00000407263 TNS1Q9HBL0 1735 aaKnown RBP14.11□□□□□ -0.15
TSPAN9-202ENST00000407263 ERBB3P21860 1342 aa14.11□□□□□ -0.15
TSPAN9-202ENST00000407263 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
TSPAN9-202ENST00000407263 HOXC9P31274 260 aa14.1□□□□□ -0.15
TSPAN9-202ENST00000407263 AMPHP49418 695 aa14.1□□□□□ -0.15
TSPAN9-202ENST00000407263 SEPT12Q8IYM1 358 aa14.1□□□□□ -0.15
TSPAN9-202ENST00000407263 KNSTRNQ9Y448 316 aa14.1□□□□□ -0.15
TSPAN9-202ENST00000407263 FLT4P35916 1363 aa14.09□□□□□ -0.15
TSPAN9-202ENST00000407263 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
TSPAN9-202ENST00000407263 ANKRD24Q8TF21 1146 aa14.09□□□□□ -0.15
TSPAN9-202ENST00000407263 EMILIN1Q9Y6C2 1016 aa14.09□□□□□ -0.15
TSPAN9-202ENST00000407263 TCP11L2Q8N4U5 519 aa14.08□□□□□ -0.16
TSPAN9-202ENST00000407263 PPM1GO15355 546 aaPredicted RBP14.07□□□□□ -0.16
TSPAN9-202ENST00000407263 CC2D1BQ5T0F9 858 aaKnown RBP14.07□□□□□ -0.16
TSPAN9-202ENST00000407263 IP6K1Q92551 441 aa14.07□□□□□ -0.16
TSPAN9-202ENST00000407263 DISP2A7MBM2 1401 aa14.07□□□□□ -0.16
TSPAN9-202ENST00000407263 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
TSPAN9-202ENST00000407263 MORC1Q86VD1 984 aa14.06□□□□□ -0.16
TSPAN9-202ENST00000407263 NLRP2Q9NX02 1062 aa14.06□□□□□ -0.16
TSPAN9-202ENST00000407263 PKD1L3Q7Z443 1732 aa14.06□□□□□ -0.16
TSPAN9-202ENST00000407263 DOT1LQ8TEK3 1739 aa14.06□□□□□ -0.16
TSPAN9-202ENST00000407263 BARGINQ6ZT62 677 aa14.05□□□□□ -0.16
TSPAN9-202ENST00000407263 INSRP06213 1382 aa14.05□□□□□ -0.16
TSPAN9-202ENST00000407263 KIF24Q5T7B8 1368 aa14.05□□□□□ -0.16
TSPAN9-202ENST00000407263 TNS2Q63HR2 1409 aa14.05□□□□□ -0.16
TSPAN9-202ENST00000407263 EP400Q96L91 3159 aa14.04□□□□□ -0.16
TSPAN9-202ENST00000407263 HSP90AB2PQ58FF8 381 aa14.04□□□□□ -0.16
TSPAN9-202ENST00000407263 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
TSPAN9-202ENST00000407263 MEGF6O75095 1541 aa14.04□□□□□ -0.16
TSPAN9-202ENST00000407263 VIRMAQ69YN4 1812 aaKnown RBP14.04□□□□□ -0.16
TSPAN9-202ENST00000407263 PER1O15534 1290 aaPredicted RBP14.03□□□□□ -0.16
TSPAN9-202ENST00000407263 ONECUT3O60422 494 aaPredicted RBP14.03□□□□□ -0.16
TSPAN9-202ENST00000407263 KRT27Q7Z3Y8 459 aa14.03□□□□□ -0.16
TSPAN9-202ENST00000407263 USHBP1Q8N6Y0 703 aa14.03□□□□□ -0.16
TSPAN9-202ENST00000407263 CARD10Q9BWT7 1032 aa14.03□□□□□ -0.16
TSPAN9-202ENST00000407263 THRAP3Q9Y2W1 955 aaKnown RBP14.03□□□□□ -0.16
TSPAN9-202ENST00000407263 KAT6BQ8WYB5 2073 aa14.02□□□□□ -0.16
TSPAN9-202ENST00000407263 NHSQ6T4R5 1651 aa14.02□□□□□ -0.16
TSPAN9-202ENST00000407263 POLKQ9UBT6 870 aa14.02□□□□□ -0.17
TSPAN9-202ENST00000407263 NPC1L1Q9UHC9 1359 aa14□□□□□ -0.17
TSPAN9-202ENST00000407263 UPF1Q92900 1129 aaKnown RBP eCLIP14□□□□□ -0.17
TSPAN9-202ENST00000407263 TOGARAM1Q9Y4F4 1720 aa14□□□□□ -0.17
TSPAN9-202ENST00000407263 OVOS2A0A0G2JMS6 1433 aa13.99□□□□□ -0.17
TSPAN9-202ENST00000407263 DDB1Q16531 1140 aa13.99□□□□□ -0.17
TSPAN9-202ENST00000407263 BTAF1O14981 1849 aa13.99□□□□□ -0.17
TSPAN9-202ENST00000407263 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
TSPAN9-202ENST00000407263 IL2RBP14784 551 aa13.98□□□□□ -0.17
TSPAN9-202ENST00000407263 PDE3BQ13370 1112 aa13.98□□□□□ -0.17
TSPAN9-202ENST00000407263 NBPF6Q5VWK0 638 aa13.98□□□□□ -0.17
TSPAN9-202ENST00000407263 NBPF4Q96M43 638 aa13.98□□□□□ -0.17
TSPAN9-202ENST00000407263 NCAPD2Q15021 1401 aa13.98□□□□□ -0.17
TSPAN9-202ENST00000407263 RREB1Q92766 1687 aa13.98□□□□□ -0.17
TSPAN9-202ENST00000407263 ITGB4P16144 1822 aa13.97□□□□□ -0.17
TSPAN9-202ENST00000407263 DDX10Q13206 875 aaKnown RBP13.97□□□□□ -0.17
TSPAN9-202ENST00000407263 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-202ENST00000407263 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.17
TSPAN9-202ENST00000407263 NUP188Q5SRE5 1749 aa13.96□□□□□ -0.17
TSPAN9-202ENST00000407263 EIF4A2Q14240 407 aaKnown RBP13.96□□□□□ -0.17
TSPAN9-202ENST00000407263 CDCA7Q9BWT1 371 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-202ENST00000407263 MTHFSP49914 203 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms