RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 IFT57Q9NWB7 429 aa7.13□□□□□ -1.27
CNGA1-202ENST00000402813 TIMM44O43615 452 aa7.13□□□□□ -1.27
CNGA1-202ENST00000402813 TSNAXIP1Q2TAA8 658 aa7.13□□□□□ -1.27
CNGA1-202ENST00000402813 PROCA1Q8NCQ7 364 aaPredicted RBP7.13□□□□□ -1.27
CNGA1-202ENST00000402813 ADAMTS19Q8TE59 1207 aa7.13□□□□□ -1.27
CNGA1-202ENST00000402813 CUX2O14529 1486 aa7.13□□□□□ -1.27
CNGA1-202ENST00000402813 GOLGA3Q08378 1498 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 SYNRGQ9UMZ2 1314 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 TCEAL9Q9UHQ7 104 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 PUF60Q9UHX1 559 aaKnown RBP7.12□□□□□ -1.27
CNGA1-202ENST00000402813 SOWAHDA6NJG2 315 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 RBL2Q08999 1139 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 TTLL12Q14166 644 aaPredicted RBP7.12□□□□□ -1.27
CNGA1-202ENST00000402813 NBPF6Q5VWK0 638 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 PHLDB3Q6NSJ2 640 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 NBPF5PQ86XG9 351 aaPredicted RBP7.12□□□□□ -1.27
CNGA1-202ENST00000402813 DRC7Q8IY82 874 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 NBPF4Q96M43 638 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 ZNF830Q96NB3 372 aaPredicted RBP7.12□□□□□ -1.27
CNGA1-202ENST00000402813 PCGF6Q9BYE7 350 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 PPP1R12CQ9BZL4 782 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 NLRP2Q9NX02 1062 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 PRDM4Q9UKN5 801 aa7.12□□□□□ -1.27
CNGA1-202ENST00000402813 ATP2B1P20020 1258 aa7.11□□□□□ -1.27
CNGA1-202ENST00000402813 NEXNQ0ZGT2 675 aa7.11□□□□□ -1.27
CNGA1-202ENST00000402813 CC2D1BQ5T0F9 858 aaKnown RBP7.11□□□□□ -1.27
CNGA1-202ENST00000402813 CCSAPQ6IQ19 270 aaPredicted RBP7.11□□□□□ -1.27
CNGA1-202ENST00000402813 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.11□□□□□ -1.27
CNGA1-202ENST00000402813 TAGLNQ01995 201 aaKnown RBP7.11□□□□□ -1.27
CNGA1-202ENST00000402813 MAP9Q49MG5 647 aa7.11□□□□□ -1.27
CNGA1-202ENST00000402813 KLF15Q9UIH9 416 aa7.11□□□□□ -1.27
CNGA1-202ENST00000402813 CTDP1Q9Y5B0 961 aaPredicted RBP7.11□□□□□ -1.27
CNGA1-202ENST00000402813 CDC5LQ99459 802 aaKnown RBP7.1□□□□□ -1.27
CNGA1-202ENST00000402813 DMGDHQ9UI17 866 aaKnown RBP7.1□□□□□ -1.27
CNGA1-202ENST00000402813 CEP164Q9UPV0 1460 aa7.1□□□□□ -1.27
CNGA1-202ENST00000402813 BIVM-ERCC5R4GMW8 1640 aa7.1□□□□□ -1.27
CNGA1-202ENST00000402813 FAM163BP0C2L3 166 aa7.1□□□□□ -1.27
CNGA1-202ENST00000402813 GJC2Q5T442 439 aaPredicted RBP7.1□□□□□ -1.27
CNGA1-202ENST00000402813 TTC39BQ5VTQ0 682 aaPredicted RBP7.1□□□□□ -1.27
CNGA1-202ENST00000402813 FILIP1Q7Z7B0 1213 aa7.1□□□□□ -1.27
CNGA1-202ENST00000402813 ZSWIM4Q9H7M6 989 aa7.1□□□□□ -1.27
CNGA1-202ENST00000402813 ZNF467Q7Z7K2 595 aaPredicted RBP7.1□□□□□ -1.27
CNGA1-202ENST00000402813 TTC30BQ8N4P2 665 aa7.1□□□□□ -1.27
CNGA1-202ENST00000402813 RUNDC1Q96C34 613 aa7.1□□□□□ -1.27
CNGA1-202ENST00000402813 GTF2F1P35269 517 aaKnown RBP eCLIP7.09□□□□□ -1.27
CNGA1-202ENST00000402813 CALD1Q05682 793 aaKnown RBP7.09□□□□□ -1.27
CNGA1-202ENST00000402813 UVSSAQ2YD98 709 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 HDGFL1Q5TGJ6 251 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 MTMR14Q8NCE2 650 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 RELTQ969Z4 430 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 AVENQ9NQS1 362 aaPredicted RBP7.09□□□□□ -1.27
CNGA1-202ENST00000402813 IQSEC3Q9UPP2 1182 aaPredicted RBP7.09□□□□□ -1.27
CNGA1-202ENST00000402813 AKAP2Q9Y2D5 859 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 SCAMP3O14828 347 aaKnown RBP7.09□□□□□ -1.27
CNGA1-202ENST00000402813 PEX19P40855 299 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 NUBP1P53384 320 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 CAMK2BQ13554 666 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 HSP90AA2PQ14568 343 aaPredicted RBP7.09□□□□□ -1.27
CNGA1-202ENST00000402813 MFSD10Q14728 455 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 ZRSR2Q15696 482 aaKnown RBP7.09□□□□□ -1.27
CNGA1-202ENST00000402813 JDP2Q8WYK2 163 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 BACH2Q9BYV9 841 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 CWC25Q9NXE8 425 aaPredicted RBP7.09□□□□□ -1.27
CNGA1-202ENST00000402813 ANAPC4Q9UJX5 808 aa7.09□□□□□ -1.27
CNGA1-202ENST00000402813 IFRD1O00458 451 aaPredicted RBP7.08□□□□□ -1.28
CNGA1-202ENST00000402813 NEUROD6Q96NK8 337 aa7.08□□□□□ -1.28
CNGA1-202ENST00000402813 MUC3BQ9H195 1237 aa7.08□□□□□ -1.28
CNGA1-202ENST00000402813 TYW1Q9NV66 732 aaKnown RBP7.08□□□□□ -1.28
CNGA1-202ENST00000402813 LDHCP07864 332 aa7.08□□□□□ -1.28
CNGA1-202ENST00000402813 PDGFRBP09619 1106 aa7.08□□□□□ -1.28
CNGA1-202ENST00000402813 SAFB2Q14151 953 aaKnown RBP eCLIP7.08□□□□□ -1.28
CNGA1-202ENST00000402813 KCTD2Q14681 263 aa7.08□□□□□ -1.28
CNGA1-202ENST00000402813 PRDM2Q13029 1718 aa7.08□□□□□ -1.28
CNGA1-202ENST00000402813 WIZO95785 1651 aa7.08□□□□□ -1.28
CNGA1-202ENST00000402813 NCKAP5LQ9HCH0 1330 aa7.08□□□□□ -1.28
CNGA1-202ENST00000402813 SOCS7O14512 581 aa7.07□□□□□ -1.28
CNGA1-202ENST00000402813 TDO2P48775 406 aa7.07□□□□□ -1.28
CNGA1-202ENST00000402813 C9orf131Q5VYM1 1079 aa7.07□□□□□ -1.28
CNGA1-202ENST00000402813 GMLQ99445 158 aa7.07□□□□□ -1.28
CNGA1-202ENST00000402813 LDHAP00338 332 aaKnown RBP7.07□□□□□ -1.28
CNGA1-202ENST00000402813 ABL2P42684 1182 aa7.07□□□□□ -1.28
CNGA1-202ENST00000402813 VPS72Q15906 364 aa7.07□□□□□ -1.28
CNGA1-202ENST00000402813 AGBL1Q96MI9 1066 aa7.07□□□□□ -1.28
CNGA1-202ENST00000402813 MYCBPQ99417 103 aaPredicted RBP7.07□□□□□ -1.28
CNGA1-202ENST00000402813 RETREG1Q9H6L5 497 aa7.07□□□□□ -1.28
CNGA1-202ENST00000402813 ZKSCAN8Q15776 578 aaPredicted RBP7.06□□□□□ -1.28
CNGA1-202ENST00000402813 RPAINQ86UA6 219 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 RSPH1Q8WYR4 309 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 REPIN1Q9BWE0 567 aaKnown RBP7.06□□□□□ -1.28
CNGA1-202ENST00000402813 TTF2Q9UNY4 1162 aaKnown RBP7.06□□□□□ -1.28
CNGA1-202ENST00000402813 SSUH2Q9Y2M2 353 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 U3KPZ7 1027 aaPredicted RBP7.06□□□□□ -1.28
CNGA1-202ENST00000402813 LDLRAD1Q5T700 205 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 DNAJC6O75061 913 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 TGFB3P10600 412 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 RFC5P40937 340 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 KRT77Q7Z794 578 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 ZSCAN30Q86W11 494 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 MPNDQ8N594 471 aa7.06□□□□□ -1.28
CNGA1-202ENST00000402813 PMFBP1Q8TBY8 1022 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms