RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 FSHRP23945 695 aa6.98□□□□□ -1.29
CD47-203ENST00000398258 SSTR3P32745 418 aaPredicted RBP6.98□□□□□ -1.29
CD47-203ENST00000398258 BAG6P46379 1132 aa6.98□□□□□ -1.29
CD47-203ENST00000398258 CBLBQ13191 982 aa6.98□□□□□ -1.29
CD47-203ENST00000398258 UPP2O95045 317 aa6.97□□□□□ -1.29
CD47-203ENST00000398258 FURINP09958 794 aa6.97□□□□□ -1.29
CD47-203ENST00000398258 SPTLC1O15269 473 aa6.96□□□□□ -1.3
CD47-203ENST00000398258 SH3RF1Q7Z6J0 888 aa6.96□□□□□ -1.3
CD47-203ENST00000398258 TSEN34Q9BSV6 310 aaKnown RBP6.96□□□□□ -1.3
CD47-203ENST00000398258 ITGA6P23229 1130 aa6.95□□□□□ -1.3
CD47-203ENST00000398258 SENP3-EIF4A1A0A087X0R7 540 aa6.94□□□□□ -1.3
CD47-203ENST00000398258 SPDYE5A6NIY4 337 aa6.94□□□□□ -1.3
CD47-203ENST00000398258 GAS6Q14393 721 aa6.94□□□□□ -1.3
CD47-203ENST00000398258 AGERQ15109 404 aa6.94□□□□□ -1.3
CD47-203ENST00000398258 CDC14CA4D256 554 aa6.93□□□□□ -1.3
CD47-203ENST00000398258 SPINT1O43278 529 aa6.93□□□□□ -1.3
CD47-203ENST00000398258 ADAMTS2O95450 1211 aa6.93□□□□□ -1.3
CD47-203ENST00000398258 HRCP23327 699 aa6.93□□□□□ -1.3
CD47-203ENST00000398258 CTSOP43234 321 aaPredicted RBP6.93□□□□□ -1.3
CD47-203ENST00000398258 RSBN1LQ6PCB5 846 aaPredicted RBP6.93□□□□□ -1.3
CD47-203ENST00000398258 Q6ZVU0 165 aa6.93□□□□□ -1.3
CD47-203ENST00000398258 BPHLQ86WA6 291 aaPredicted RBP6.93□□□□□ -1.3
CD47-203ENST00000398258 CUEDC1Q9NWM3 386 aaPredicted RBP6.93□□□□□ -1.3
CD47-203ENST00000398258 ITGB7P26010 798 aa6.92□□□□□ -1.3
CD47-203ENST00000398258 SH3BP5LQ7L8J4 393 aa6.92□□□□□ -1.3
CD47-203ENST00000398258 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
CD47-203ENST00000398258 MAP4K5Q9Y4K4 846 aa6.92□□□□□ -1.3
CD47-203ENST00000398258 CELA2BP08218 269 aaPredicted RBP6.91□□□□□ -1.3
CD47-203ENST00000398258 VASH1Q7L8A9 365 aaPredicted RBP6.91□□□□□ -1.3
CD47-203ENST00000398258 TRMT44Q8IYL2 757 aaKnown RBP6.91□□□□□ -1.3
CD47-203ENST00000398258 CCDC116Q8IYX3 515 aa6.91□□□□□ -1.3
CD47-203ENST00000398258 AGBL1Q96MI9 1066 aa6.91□□□□□ -1.3
CD47-203ENST00000398258 CNTNAP5Q8WYK1 1306 aa6.91□□□□□ -1.3
CD47-203ENST00000398258 PPP1R26Q5T8A7 1209 aaPredicted RBP6.9□□□□□ -1.3
CD47-203ENST00000398258 SV2AQ7L0J3 742 aa6.9□□□□□ -1.3
CD47-203ENST00000398258 TBC1D2Q9BYX2 928 aa6.9□□□□□ -1.3
CD47-203ENST00000398258 EMILIN1Q9Y6C2 1016 aa6.9□□□□□ -1.3
CD47-203ENST00000398258 INSM2Q96T92 566 aaPredicted RBP6.89□□□□□ -1.31
CD47-203ENST00000398258 GIGYF2Q6Y7W6 1299 aaKnown RBP6.88□□□□□ -1.31
CD47-203ENST00000398258 KRI1Q8N9T8 703 aaKnown RBP6.88□□□□□ -1.31
CD47-203ENST00000398258 BEGAINQ9BUH8 593 aa6.88□□□□□ -1.31
CD47-203ENST00000398258 ARID1BQ8NFD5 2236 aaPredicted RBP6.87□□□□□ -1.31
CD47-203ENST00000398258 MAGEB6P1A0A0J9YX57 407 aa6.87□□□□□ -1.31
CD47-203ENST00000398258 GJA5P36382 358 aa6.87□□□□□ -1.31
CD47-203ENST00000398258 ERFEQ4G0M1 354 aa6.87□□□□□ -1.31
CD47-203ENST00000398258 RNF217Q8TC41 542 aa6.87□□□□□ -1.31
CD47-203ENST00000398258 SRSF11Q05519 484 aaKnown RBP6.86□□□□□ -1.31
CD47-203ENST00000398258 RELBQ01201 579 aa6.85□□□□□ -1.31
CD47-203ENST00000398258 QPCTQ16769 361 aa6.85□□□□□ -1.31
CD47-203ENST00000398258 CARD14Q9BXL6 1004 aa6.85□□□□□ -1.31
CD47-203ENST00000398258 ZBTB3Q9H5J0 574 aa6.85□□□□□ -1.31
CD47-203ENST00000398258 KDM2AQ9Y2K7 1162 aa6.85□□□□□ -1.31
CD47-203ENST00000398258 PLCB2Q00722 1185 aa6.84□□□□□ -1.31
CD47-203ENST00000398258 CSPP1Q1MSJ5 1256 aa6.84□□□□□ -1.31
CD47-203ENST00000398258 FOXD4L5Q5VV16 416 aaPredicted RBP6.84□□□□□ -1.31
CD47-203ENST00000398258 TTLL12Q14166 644 aaPredicted RBP6.83□□□□□ -1.32
CD47-203ENST00000398258 AMHR2Q16671 573 aa6.83□□□□□ -1.32
CD47-203ENST00000398258 KDF1Q8NAX2 398 aaPredicted RBP6.83□□□□□ -1.32
CD47-203ENST00000398258 ZNF395Q9H8N7 513 aaPredicted RBP6.83□□□□□ -1.32
CD47-203ENST00000398258 LIMD1Q9UGP4 676 aa6.83□□□□□ -1.32
CD47-203ENST00000398258 PHF20L1A8MW92 1017 aa6.81□□□□□ -1.32
CD47-203ENST00000398258 GPR25O00155 361 aa6.81□□□□□ -1.32
CD47-203ENST00000398258 MAP3K10Q02779 954 aa6.81□□□□□ -1.32
CD47-203ENST00000398258 PRPF38BQ5VTL8 546 aaKnown RBP6.81□□□□□ -1.32
CD47-203ENST00000398258 RIC3Q7Z5B4 369 aa6.81□□□□□ -1.32
CD47-203ENST00000398258 TSC1Q92574 1164 aa6.81□□□□□ -1.32
CD47-203ENST00000398258 PGPEP1Q9NXJ5 209 aa6.81□□□□□ -1.32
CD47-203ENST00000398258 INTS6LQ5JSJ4 861 aaKnown RBP6.8□□□□□ -1.32
CD47-203ENST00000398258 KRTAP5-3Q6L8H2 238 aa6.8□□□□□ -1.32
CD47-203ENST00000398258 ACDQ96AP0 544 aa6.8□□□□□ -1.32
CD47-203ENST00000398258 KCTD15Q96SI1 283 aaPredicted RBP6.8□□□□□ -1.32
CD47-203ENST00000398258 OCSTAMPQ9BR26 566 aa6.8□□□□□ -1.32
CD47-203ENST00000398258 POLMQ9NP87 494 aaPredicted RBP6.8□□□□□ -1.32
CD47-203ENST00000398258 KRBA1A5PL33 1030 aa6.79□□□□□ -1.32
CD47-203ENST00000398258 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
CD47-203ENST00000398258 ZMYM1Q5SVZ6 1142 aa6.79□□□□□ -1.32
CD47-203ENST00000398258 NBPF14Q5TI25 921 aa6.79□□□□□ -1.32
CD47-203ENST00000398258 PARP9Q8IXQ6 854 aa6.79□□□□□ -1.32
CD47-203ENST00000398258 ZNF837Q96EG3 531 aaPredicted RBP6.79□□□□□ -1.32
CD47-203ENST00000398258 TMPRSS4Q9NRS4 437 aa6.79□□□□□ -1.32
CD47-203ENST00000398258 IGF1RP08069 1367 aa6.79□□□□□ -1.32
CD47-203ENST00000398258 COBLO75128 1261 aa6.78□□□□□ -1.32
CD47-203ENST00000398258 RTL5Q5HYW3 569 aaPredicted RBP6.78□□□□□ -1.32
CD47-203ENST00000398258 ARMC2Q8NEN0 867 aa6.78□□□□□ -1.32
CD47-203ENST00000398258 LILRB3O75022 631 aa6.77□□□□□ -1.33
CD47-203ENST00000398258 SNRPNP63162 240 aaKnown RBP6.77□□□□□ -1.33
CD47-203ENST00000398258 KRTAP4-11Q9BYQ6 195 aa6.77□□□□□ -1.33
CD47-203ENST00000398258 MBIPQ9NS73 344 aa6.77□□□□□ -1.33
CD47-203ENST00000398258 LILRA1O75019 489 aa6.76□□□□□ -1.33
CD47-203ENST00000398258 BCRP11274 1271 aa6.76□□□□□ -1.33
CD47-203ENST00000398258 RHOQP17081 205 aa6.76□□□□□ -1.33
CD47-203ENST00000398258 DBN1Q16643 649 aa6.76□□□□□ -1.33
CD47-203ENST00000398258 MYSM1Q5VVJ2 828 aa6.75□□□□□ -1.33
CD47-203ENST00000398258 BARGINQ6ZT62 677 aa6.75□□□□□ -1.33
CD47-203ENST00000398258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.75□□□□□ -1.33
CD47-203ENST00000398258 BEND7Q8N7W2 519 aaPredicted RBP6.75□□□□□ -1.33
CD47-203ENST00000398258 ZNF784Q8NCA9 323 aaPredicted RBP6.75□□□□□ -1.33
CD47-203ENST00000398258 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
CD47-203ENST00000398258 COL8A1P27658 744 aa6.74□□□□□ -1.33
CD47-203ENST00000398258 FOXD4L6Q3SYB3 417 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms