RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 PARD3Q8TEW0 1356 aa23.38■■□□□ 1.33
HLA-A-204ENST00000396634 AMPHP49418 695 aa23.38■■□□□ 1.33
HLA-A-204ENST00000396634 STRN4Q9NRL3 753 aa23.38■■□□□ 1.33
HLA-A-204ENST00000396634 SLIT2O94813 1529 aa23.38■■□□□ 1.33
HLA-A-204ENST00000396634 LTV1Q96GA3 475 aaPredicted RBP23.37■■□□□ 1.33
HLA-A-204ENST00000396634 NWD2Q9ULI1 1742 aa23.37■■□□□ 1.33
HLA-A-204ENST00000396634 BCL9LQ86UU0 1499 aa23.36■■□□□ 1.33
HLA-A-204ENST00000396634 AATKQ6ZMQ8 1374 aa23.36■■□□□ 1.33
HLA-A-204ENST00000396634 HOXC9P31274 260 aa23.36■■□□□ 1.33
HLA-A-204ENST00000396634 HSP90AB2PQ58FF8 381 aa23.36■■□□□ 1.33
HLA-A-204ENST00000396634 RGPD2P0DJD1 1756 aa23.36■■□□□ 1.33
HLA-A-204ENST00000396634 USP21Q9UK80 565 aa23.34■■□□□ 1.33
HLA-A-204ENST00000396634 COL5A2P05997 1499 aaPredicted RBP23.34■■□□□ 1.33
HLA-A-204ENST00000396634 MTHFSP49914 203 aa23.34■■□□□ 1.33
HLA-A-204ENST00000396634 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
HLA-A-204ENST00000396634 RGS17Q9UGC6 210 aaPredicted RBP23.34■■□□□ 1.33
HLA-A-204ENST00000396634 GTF3C3Q9Y5Q9 886 aa23.34■■□□□ 1.33
HLA-A-204ENST00000396634 PPP2R1AP30153 589 aa23.33■■□□□ 1.33
HLA-A-204ENST00000396634 FNBP4Q8N3X1 1017 aaPredicted RBP23.33■■□□□ 1.33
HLA-A-204ENST00000396634 PRKRIP1Q9H875 184 aaPredicted RBP23.33■■□□□ 1.33
HLA-A-204ENST00000396634 IP6K1Q92551 441 aa23.32■■□□□ 1.32
HLA-A-204ENST00000396634 FLT4P35916 1363 aa23.32■■□□□ 1.32
HLA-A-204ENST00000396634 LARP1Q6PKG0 1096 aaKnown RBP23.31■■□□□ 1.32
HLA-A-204ENST00000396634 SMG6Q86US8 1419 aaKnown RBP23.31■■□□□ 1.32
HLA-A-204ENST00000396634 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.3■■□□□ 1.32
HLA-A-204ENST00000396634 UNC5CLQ8IV45 518 aa23.3■■□□□ 1.32
HLA-A-204ENST00000396634 USP35Q9P2H5 1018 aa23.3■■□□□ 1.32
HLA-A-204ENST00000396634 RTL1A6NKG5 1358 aa23.29■■□□□ 1.32
HLA-A-204ENST00000396634 EVA1CP58658 441 aa23.29■■□□□ 1.32
HLA-A-204ENST00000396634 ANKRD24Q8TF21 1146 aa23.29■■□□□ 1.32
HLA-A-204ENST00000396634 CCDC9Q9Y3X0 531 aaKnown RBP23.28■■□□□ 1.32
HLA-A-204ENST00000396634 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
HLA-A-204ENST00000396634 ERBB3P21860 1342 aa23.28■■□□□ 1.32
HLA-A-204ENST00000396634 ABCC6O95255 1503 aa23.28■■□□□ 1.32
HLA-A-204ENST00000396634 CSB-PGBD3P0DP91 1061 aa23.28■■□□□ 1.32
HLA-A-204ENST00000396634 DIEXFQ68CQ4 756 aaKnown RBP23.28■■□□□ 1.32
HLA-A-204ENST00000396634 BLMP54132 1417 aaPredicted RBP23.27■■□□□ 1.32
HLA-A-204ENST00000396634 RALBP1Q15311 655 aa23.26■■□□□ 1.31
HLA-A-204ENST00000396634 POTEAQ6S8J7 498 aa23.26■■□□□ 1.31
HLA-A-204ENST00000396634 INSRP06213 1382 aa23.25■■□□□ 1.31
HLA-A-204ENST00000396634 ANP32CO43423 234 aa23.25■■□□□ 1.31
HLA-A-204ENST00000396634 USHBP1Q8N6Y0 703 aa23.25■■□□□ 1.31
HLA-A-204ENST00000396634 QTRT2Q9H974 415 aaKnown RBP23.24■■□□□ 1.31
HLA-A-204ENST00000396634 ATRNO75882 1429 aa23.24■■□□□ 1.31
HLA-A-204ENST00000396634 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
HLA-A-204ENST00000396634 EIF4A2Q14240 407 aaKnown RBP23.24■■□□□ 1.31
HLA-A-204ENST00000396634 TOM1L2Q6ZVM7 507 aa23.24■■□□□ 1.31
HLA-A-204ENST00000396634 WDR17Q8IZU2 1322 aa23.24■■□□□ 1.31
HLA-A-204ENST00000396634 MYBBP1AQ9BQG0 1328 aaKnown RBP23.24■■□□□ 1.31
HLA-A-204ENST00000396634 GLI3P10071 1580 aa23.23■■□□□ 1.31
HLA-A-204ENST00000396634 NLRP2Q9NX02 1062 aa23.23■■□□□ 1.31
HLA-A-204ENST00000396634 KIF24Q5T7B8 1368 aa23.22■■□□□ 1.31
HLA-A-204ENST00000396634 CCDC184Q52MB2 194 aa23.22■■□□□ 1.31
HLA-A-204ENST00000396634 ZNF772Q68DY9 489 aaPredicted RBP23.21■■□□□ 1.31
HLA-A-204ENST00000396634 CRB1P82279 1406 aa23.21■■□□□ 1.31
HLA-A-204ENST00000396634 VPS72Q15906 364 aa23.2■■□□□ 1.3
HLA-A-204ENST00000396634 NBPF6Q5VWK0 638 aa23.2■■□□□ 1.3
HLA-A-204ENST00000396634 NBPF4Q96M43 638 aa23.2■■□□□ 1.3
HLA-A-204ENST00000396634 FAM208AQ9UK61 1670 aaKnown RBP23.2■■□□□ 1.3
HLA-A-204ENST00000396634 TRPC5Q9UL62 973 aaPredicted RBP23.19■■□□□ 1.3
HLA-A-204ENST00000396634 SPATA31A5Q5VU36 1347 aa23.19■■□□□ 1.3
HLA-A-204ENST00000396634 SPATA31A7Q8IWB4 1347 aa23.19■■□□□ 1.3
HLA-A-204ENST00000396634 SPATA31A1Q5TZJ5 1347 aa23.18■■□□□ 1.3
HLA-A-204ENST00000396634 FAM98CQ17RN3 349 aaKnown RBP23.17■■□□□ 1.3
HLA-A-204ENST00000396634 GJD4Q96KN9 370 aaPredicted RBP23.17■■□□□ 1.3
HLA-A-204ENST00000396634 EYA1Q99502 592 aa23.17■■□□□ 1.3
HLA-A-204ENST00000396634 IL13P35225 146 aa23.16■■□□□ 1.3
HLA-A-204ENST00000396634 RGPD1P0DJD0 1748 aa23.16■■□□□ 1.3
HLA-A-204ENST00000396634 WNK3Q9BYP7 1800 aa23.16■■□□□ 1.3
HLA-A-204ENST00000396634 DIAPH1O60610 1272 aaKnown RBP23.15■■□□□ 1.3
HLA-A-204ENST00000396634 AEBP1Q8IUX7 1158 aa23.15■■□□□ 1.3
HLA-A-204ENST00000396634 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.29
HLA-A-204ENST00000396634 CFAP53Q96M91 514 aa23.14■■□□□ 1.29
HLA-A-204ENST00000396634 A0A0G2JS52 829 aa23.13■■□□□ 1.29
HLA-A-204ENST00000396634 CARD10Q9BWT7 1032 aa23.13■■□□□ 1.29
HLA-A-204ENST00000396634 HMOX1P09601 288 aa23.12■■□□□ 1.29
HLA-A-204ENST00000396634 MIER1Q8N108 512 aa23.12■■□□□ 1.29
HLA-A-204ENST00000396634 TCP11L2Q8N4U5 519 aa23.12■■□□□ 1.29
HLA-A-204ENST00000396634 EP400Q96L91 3159 aa23.12■■□□□ 1.29
HLA-A-204ENST00000396634 MEGF6O75095 1541 aa23.1■■□□□ 1.29
HLA-A-204ENST00000396634 RXRBP28702 533 aa23.1■■□□□ 1.29
HLA-A-204ENST00000396634 RBM6P78332 1123 aaKnown RBP23.1■■□□□ 1.29
HLA-A-204ENST00000396634 IGSF1Q8N6C5 1336 aa23.1■■□□□ 1.29
HLA-A-204ENST00000396634 BRWD3Q6RI45 1802 aa23.09■■□□□ 1.29
HLA-A-204ENST00000396634 SULT6B1Q6IMI4 303 aa23.09■■□□□ 1.29
HLA-A-204ENST00000396634 THSD7AQ9UPZ6 1657 aa23.08■■□□□ 1.29
HLA-A-204ENST00000396634 RGS12O14924 1447 aa23.08■■□□□ 1.28
HLA-A-204ENST00000396634 MRS2Q9HD23 443 aa23.07■■□□□ 1.28
HLA-A-204ENST00000396634 LRRC37A3O60309 1634 aa23.06■■□□□ 1.28
HLA-A-204ENST00000396634 DISP2A7MBM2 1401 aa23.06■■□□□ 1.28
HLA-A-204ENST00000396634 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
HLA-A-204ENST00000396634 U2AF1L5P0DN76 240 aaPredicted RBP23.06■■□□□ 1.28
HLA-A-204ENST00000396634 U2AF1Q01081 240 aaKnown RBP eCLIP23.06■■□□□ 1.28
HLA-A-204ENST00000396634 SEPT12Q8IYM1 358 aa23.05■■□□□ 1.28
HLA-A-204ENST00000396634 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
HLA-A-204ENST00000396634 IL2RBP14784 551 aa23.03■■□□□ 1.28
HLA-A-204ENST00000396634 FAM182BQ5T319 152 aa23.03■■□□□ 1.28
HLA-A-204ENST00000396634 BARGINQ6ZT62 677 aa23.03■■□□□ 1.28
HLA-A-204ENST00000396634 SHANK3Q9BYB0 1731 aa23.03■■□□□ 1.28
HLA-A-204ENST00000396634 THRAP3Q9Y2W1 955 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms