RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
GABPB1-204ENST00000396464 NR3C2P08235 984 aa8.09□□□□□ -1.11
GABPB1-204ENST00000396464 KLF16Q9BXK1 252 aaPredicted RBP8.09□□□□□ -1.11
GABPB1-204ENST00000396464 SOBPA7XYQ1 873 aa8.08□□□□□ -1.12
GABPB1-204ENST00000396464 GRM5P41594 1212 aa8.08□□□□□ -1.12
GABPB1-204ENST00000396464 ZSCAN1Q8NBB4 408 aa8.08□□□□□ -1.12
GABPB1-204ENST00000396464 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.12
GABPB1-204ENST00000396464 MAP4K5Q9Y4K4 846 aa8.07□□□□□ -1.12
GABPB1-204ENST00000396464 EMILIN1Q9Y6C2 1016 aa8.07□□□□□ -1.12
GABPB1-204ENST00000396464 APBB1O00213 710 aa8.06□□□□□ -1.12
GABPB1-204ENST00000396464 SH3RF1Q7Z6J0 888 aa8.06□□□□□ -1.12
GABPB1-204ENST00000396464 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
GABPB1-204ENST00000396464 C1QTNF2Q9BXJ5 285 aa8.06□□□□□ -1.12
GABPB1-204ENST00000396464 IGSF3O75054 1194 aa8.05□□□□□ -1.12
GABPB1-204ENST00000396464 CTDSPL2Q05D32 466 aa8.05□□□□□ -1.12
GABPB1-204ENST00000396464 SH3BP5LQ7L8J4 393 aa8.05□□□□□ -1.12
GABPB1-204ENST00000396464 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
GABPB1-204ENST00000396464 CCDC116Q8IYX3 515 aa8.05□□□□□ -1.12
GABPB1-204ENST00000396464 MEIOBQ8N635 442 aa8.05□□□□□ -1.12
GABPB1-204ENST00000396464 TSEN34Q9BSV6 310 aaKnown RBP8.05□□□□□ -1.12
GABPB1-204ENST00000396464 ARHGAP9Q9BRR9 750 aa8.04□□□□□ -1.12
GABPB1-204ENST00000396464 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
GABPB1-204ENST00000396464 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
GABPB1-204ENST00000396464 ZBTB33Q86T24 672 aa8.03□□□□□ -1.12
GABPB1-204ENST00000396464 KCTD17Q8N5Z5 321 aa8.03□□□□□ -1.12
GABPB1-204ENST00000396464 SLC10A4Q96EP9 437 aa8.03□□□□□ -1.12
GABPB1-204ENST00000396464 GPBP1L1Q9HC44 474 aaPredicted RBP8.03□□□□□ -1.12
GABPB1-204ENST00000396464 EIF5BO60841 1220 aaKnown RBP8.03□□□□□ -1.12
GABPB1-204ENST00000396464 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
GABPB1-204ENST00000396464 ERFEQ4G0M1 354 aa8.03□□□□□ -1.12
GABPB1-204ENST00000396464 PNMA1Q8ND90 353 aa8.03□□□□□ -1.12
GABPB1-204ENST00000396464 PDXDC2PQ6P474 469 aa8.02□□□□□ -1.13
GABPB1-204ENST00000396464 IL27Q8NEV9 243 aa8.02□□□□□ -1.13
GABPB1-204ENST00000396464 DDRGK1Q96HY6 314 aa8.02□□□□□ -1.13
GABPB1-204ENST00000396464 FKBPLQ9UIM3 349 aa8.02□□□□□ -1.13
GABPB1-204ENST00000396464 CDV3Q9UKY7 258 aaKnown RBP8.02□□□□□ -1.13
GABPB1-204ENST00000396464 LRRN4Q8WUT4 740 aa8.01□□□□□ -1.13
GABPB1-204ENST00000396464 SHROOM4Q9ULL8 1493 aa8□□□□□ -1.13
GABPB1-204ENST00000396464 PTK2Q05397 1052 aa8□□□□□ -1.13
GABPB1-204ENST00000396464 DHX9Q08211 1270 aaKnown RBP8□□□□□ -1.13
GABPB1-204ENST00000396464 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8□□□□□ -1.13
GABPB1-204ENST00000396464 PPP1R26Q5T8A7 1209 aaPredicted RBP8□□□□□ -1.13
GABPB1-204ENST00000396464 TTLL8A6PVC2 850 aa7.99□□□□□ -1.13
GABPB1-204ENST00000396464 PPFIA3O75145 1194 aa7.99□□□□□ -1.13
GABPB1-204ENST00000396464 AP1G2O75843 785 aa7.99□□□□□ -1.13
GABPB1-204ENST00000396464 SH3D19Q5HYK7 790 aa7.99□□□□□ -1.13
GABPB1-204ENST00000396464 KCTD15Q96SI1 283 aaPredicted RBP7.99□□□□□ -1.13
GABPB1-204ENST00000396464 KDM4CQ9H3R0 1056 aa7.99□□□□□ -1.13
GABPB1-204ENST00000396464 SOS2Q07890 1332 aaPredicted RBP7.99□□□□□ -1.13
GABPB1-204ENST00000396464 ZC3H4Q9UPT8 1303 aaKnown RBP7.99□□□□□ -1.13
GABPB1-204ENST00000396464 RAD21O60216 631 aa7.98□□□□□ -1.13
GABPB1-204ENST00000396464 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
GABPB1-204ENST00000396464 NR6A1Q15406 480 aa7.98□□□□□ -1.13
GABPB1-204ENST00000396464 DNMT3LQ9UJW3 386 aa7.98□□□□□ -1.13
GABPB1-204ENST00000396464 CCDC82Q8N4S0 544 aa7.97□□□□□ -1.13
GABPB1-204ENST00000396464 FIGNL2A6NMB9 653 aa7.96□□□□□ -1.13
GABPB1-204ENST00000396464 CBLBQ13191 982 aa7.96□□□□□ -1.13
GABPB1-204ENST00000396464 PROCA1Q8NCQ7 364 aaPredicted RBP7.96□□□□□ -1.13
GABPB1-204ENST00000396464 NBPF20Q3BBV1 942 aa7.95□□□□□ -1.14
GABPB1-204ENST00000396464 RGS22Q8NE09 1264 aa7.95□□□□□ -1.14
GABPB1-204ENST00000396464 FAM117AQ9C073 453 aa7.95□□□□□ -1.14
GABPB1-204ENST00000396464 GPSM3Q9Y4H4 160 aa7.95□□□□□ -1.14
GABPB1-204ENST00000396464 RAB15P59190 212 aa7.94□□□□□ -1.14
GABPB1-204ENST00000396464 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
GABPB1-204ENST00000396464 ADAM32Q8TC27 787 aa7.94□□□□□ -1.14
GABPB1-204ENST00000396464 SPINT1O43278 529 aa7.93□□□□□ -1.14
GABPB1-204ENST00000396464 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
GABPB1-204ENST00000396464 RELBQ01201 579 aa7.93□□□□□ -1.14
GABPB1-204ENST00000396464 PTSQ03393 145 aa7.93□□□□□ -1.14
GABPB1-204ENST00000396464 INTS6LQ5JSJ4 861 aaKnown RBP7.93□□□□□ -1.14
GABPB1-204ENST00000396464 Q6ZVU0 165 aa7.93□□□□□ -1.14
GABPB1-204ENST00000396464 DZIP3Q86Y13 1208 aaKnown RBP7.93□□□□□ -1.14
GABPB1-204ENST00000396464 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
GABPB1-204ENST00000396464 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.93□□□□□ -1.14
GABPB1-204ENST00000396464 TRAIPQ9BWF2 469 aa7.93□□□□□ -1.14
GABPB1-204ENST00000396464 POLMQ9NP87 494 aaPredicted RBP7.93□□□□□ -1.14
GABPB1-204ENST00000396464 USP17L8P0C7I0 530 aa7.91□□□□□ -1.14
GABPB1-204ENST00000396464 AGBL1Q96MI9 1066 aa7.91□□□□□ -1.14
GABPB1-204ENST00000396464 MTMR7Q9Y216 660 aa7.91□□□□□ -1.14
GABPB1-204ENST00000396464 CDK11BP21127 795 aaKnown RBP7.9□□□□□ -1.14
GABPB1-204ENST00000396464 CCDC155Q8N6L0 562 aa7.9□□□□□ -1.14
GABPB1-204ENST00000396464 CDK11AQ9UQ88 783 aaPredicted RBP7.9□□□□□ -1.14
GABPB1-204ENST00000396464 CNTNAP3BQ96NU0 1288 aa7.89□□□□□ -1.15
GABPB1-204ENST00000396464 INSM2Q96T92 566 aaPredicted RBP7.89□□□□□ -1.15
GABPB1-204ENST00000396464 CNTNAP3Q9BZ76 1288 aa7.89□□□□□ -1.15
GABPB1-204ENST00000396464 HMGB1P09429 215 aaKnown RBP7.88□□□□□ -1.15
GABPB1-204ENST00000396464 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
GABPB1-204ENST00000396464 PCMTD1Q96MG8 357 aaPredicted RBP7.88□□□□□ -1.15
GABPB1-204ENST00000396464 ZNF395Q9H8N7 513 aaPredicted RBP7.88□□□□□ -1.15
GABPB1-204ENST00000396464 CDC14CA4D256 554 aa7.87□□□□□ -1.15
GABPB1-204ENST00000396464 HSP90B1P14625 803 aaKnown RBP7.87□□□□□ -1.15
GABPB1-204ENST00000396464 CTSOP43234 321 aaPredicted RBP7.87□□□□□ -1.15
GABPB1-204ENST00000396464 FLIIQ13045 1269 aa7.87□□□□□ -1.15
GABPB1-204ENST00000396464 TMCO4Q5TGY1 634 aa7.87□□□□□ -1.15
GABPB1-204ENST00000396464 FBXO31Q5XUX0 539 aaPredicted RBP7.87□□□□□ -1.15
GABPB1-204ENST00000396464 EPS8L1Q8TE68 723 aa7.87□□□□□ -1.15
GABPB1-204ENST00000396464 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
GABPB1-204ENST00000396464 RFC5P40937 340 aa7.86□□□□□ -1.15
GABPB1-204ENST00000396464 RBM25P49756 843 aaKnown RBP7.86□□□□□ -1.15
GABPB1-204ENST00000396464 ZNF784Q8NCA9 323 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms