RNA–Protein interactions for RNA: ENST00000394225.6

NDUFC1-202, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 2

Gene NDUFC1, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-202ENST00000394225 TRPC5Q9UL62 973 aaPredicted RBP20.72■□□□□ 0.91
NDUFC1-202ENST00000394225 NRAPQ86VF7 1730 aa20.72■□□□□ 0.91
NDUFC1-202ENST00000394225 DDX10Q13206 875 aaKnown RBP20.71■□□□□ 0.91
NDUFC1-202ENST00000394225 COL18A1P39060 1754 aa20.71■□□□□ 0.91
NDUFC1-202ENST00000394225 MAP3K19Q56UN5 1328 aa20.7■□□□□ 0.9
NDUFC1-202ENST00000394225 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.9
NDUFC1-202ENST00000394225 RTL1A6NKG5 1358 aa20.7■□□□□ 0.9
NDUFC1-202ENST00000394225 KIF24Q5T7B8 1368 aa20.7■□□□□ 0.9
NDUFC1-202ENST00000394225 ATRNO75882 1429 aa20.7■□□□□ 0.9
NDUFC1-202ENST00000394225 QTRT2Q9H974 415 aaKnown RBP20.69■□□□□ 0.9
NDUFC1-202ENST00000394225 AMPHP49418 695 aa20.68■□□□□ 0.9
NDUFC1-202ENST00000394225 EVA1CP58658 441 aa20.68■□□□□ 0.9
NDUFC1-202ENST00000394225 CC2D1BQ5T0F9 858 aaKnown RBP20.68■□□□□ 0.9
NDUFC1-202ENST00000394225 BLMP54132 1417 aaPredicted RBP20.68■□□□□ 0.9
NDUFC1-202ENST00000394225 COL5A2P05997 1499 aaPredicted RBP20.68■□□□□ 0.9
NDUFC1-202ENST00000394225 RRS1Q15050 365 aaKnown RBP20.67■□□□□ 0.9
NDUFC1-202ENST00000394225 VPS72Q15906 364 aa20.67■□□□□ 0.9
NDUFC1-202ENST00000394225 IP6K1Q92551 441 aa20.67■□□□□ 0.9
NDUFC1-202ENST00000394225 FBLN1P23142 703 aa20.66■□□□□ 0.9
NDUFC1-202ENST00000394225 TNNT2P45379 298 aaPredicted RBP20.66■□□□□ 0.9
NDUFC1-202ENST00000394225 POTEAQ6S8J7 498 aa20.66■□□□□ 0.9
NDUFC1-202ENST00000394225 STRN4Q9NRL3 753 aa20.66■□□□□ 0.9
NDUFC1-202ENST00000394225 AXIN2Q9Y2T1 843 aa20.66■□□□□ 0.9
NDUFC1-202ENST00000394225 FLT4P35916 1363 aa20.65■□□□□ 0.9
NDUFC1-202ENST00000394225 HOXC9P31274 260 aa20.65■□□□□ 0.9
NDUFC1-202ENST00000394225 CCDC9Q9Y3X0 531 aaKnown RBP20.65■□□□□ 0.9
NDUFC1-202ENST00000394225 MAP2P11137 1827 aaKnown RBP20.64■□□□□ 0.9
NDUFC1-202ENST00000394225 RBM6P78332 1123 aaKnown RBP20.64■□□□□ 0.89
NDUFC1-202ENST00000394225 RGPD5Q99666 1765 aa20.64■□□□□ 0.89
NDUFC1-202ENST00000394225 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
NDUFC1-202ENST00000394225 RXRBP28702 533 aa20.63■□□□□ 0.89
NDUFC1-202ENST00000394225 GJD4Q96KN9 370 aaPredicted RBP20.63■□□□□ 0.89
NDUFC1-202ENST00000394225 WDR17Q8IZU2 1322 aa20.62■□□□□ 0.89
NDUFC1-202ENST00000394225 CSB-PGBD3P0DP91 1061 aa20.62■□□□□ 0.89
NDUFC1-202ENST00000394225 CNGB1Q14028 1251 aaPredicted RBP20.62■□□□□ 0.89
NDUFC1-202ENST00000394225 POLKQ9UBT6 870 aa20.62■□□□□ 0.89
NDUFC1-202ENST00000394225 EMILIN1Q9Y6C2 1016 aa20.62■□□□□ 0.89
NDUFC1-202ENST00000394225 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
NDUFC1-202ENST00000394225 ERBB3P21860 1342 aa20.61■□□□□ 0.89
NDUFC1-202ENST00000394225 PEAK1Q9H792 1746 aa20.61■□□□□ 0.89
NDUFC1-202ENST00000394225 CRB1P82279 1406 aa20.61■□□□□ 0.89
NDUFC1-202ENST00000394225 INSRP06213 1382 aa20.6■□□□□ 0.89
NDUFC1-202ENST00000394225 SPATA31A5Q5VU36 1347 aa20.6■□□□□ 0.89
NDUFC1-202ENST00000394225 SPATA31A7Q8IWB4 1347 aa20.6■□□□□ 0.89
NDUFC1-202ENST00000394225 PPM1GO15355 546 aaPredicted RBP20.6■□□□□ 0.89
NDUFC1-202ENST00000394225 LARP1Q6PKG0 1096 aaKnown RBP20.6■□□□□ 0.89
NDUFC1-202ENST00000394225 ANKRD24Q8TF21 1146 aa20.6■□□□□ 0.89
NDUFC1-202ENST00000394225 FAM208AQ9UK61 1670 aaKnown RBP20.6■□□□□ 0.89
NDUFC1-202ENST00000394225 TOM1L2Q6ZVM7 507 aa20.59■□□□□ 0.89
NDUFC1-202ENST00000394225 GLI3P10071 1580 aa20.59■□□□□ 0.89
NDUFC1-202ENST00000394225 SPATA31A1Q5TZJ5 1347 aa20.58■□□□□ 0.89
NDUFC1-202ENST00000394225 CDK12Q9NYV4 1490 aaPredicted RBP20.58■□□□□ 0.89
NDUFC1-202ENST00000394225 HSP90AB2PQ58FF8 381 aa20.57■□□□□ 0.88
NDUFC1-202ENST00000394225 LTV1Q96GA3 475 aaPredicted RBP20.56■□□□□ 0.88
NDUFC1-202ENST00000394225 THRAP3Q9Y2W1 955 aaKnown RBP20.56■□□□□ 0.88
NDUFC1-202ENST00000394225 PARD3Q8TEW0 1356 aa20.56■□□□□ 0.88
NDUFC1-202ENST00000394225 TCP11L2Q8N4U5 519 aa20.55■□□□□ 0.88
NDUFC1-202ENST00000394225 CARD10Q9BWT7 1032 aa20.55■□□□□ 0.88
NDUFC1-202ENST00000394225 RALBP1Q15311 655 aa20.54■□□□□ 0.88
NDUFC1-202ENST00000394225 NLRP2Q9NX02 1062 aa20.54■□□□□ 0.88
NDUFC1-202ENST00000394225 USP35Q9P2H5 1018 aa20.54■□□□□ 0.88
NDUFC1-202ENST00000394225 MTHFSP49914 203 aa20.53■□□□□ 0.88
NDUFC1-202ENST00000394225 BARGINQ6ZT62 677 aa20.53■□□□□ 0.88
NDUFC1-202ENST00000394225 ONECUT3O60422 494 aaPredicted RBP20.52■□□□□ 0.88
NDUFC1-202ENST00000394225 FAM98CQ17RN3 349 aaKnown RBP20.52■□□□□ 0.88
NDUFC1-202ENST00000394225 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
NDUFC1-202ENST00000394225 CDCA7Q9BWT1 371 aaPredicted RBP20.5■□□□□ 0.87
NDUFC1-202ENST00000394225 RGS12O14924 1447 aa20.5■□□□□ 0.87
NDUFC1-202ENST00000394225 A0A0G2JS52 829 aa20.49■□□□□ 0.87
NDUFC1-202ENST00000394225 MYT1Q01538 1121 aa20.49■□□□□ 0.87
NDUFC1-202ENST00000394225 CFAP53Q96M91 514 aa20.49■□□□□ 0.87
NDUFC1-202ENST00000394225 THSD7AQ9UPZ6 1657 aa20.48■□□□□ 0.87
NDUFC1-202ENST00000394225 EIF4A2Q14240 407 aaKnown RBP20.48■□□□□ 0.87
NDUFC1-202ENST00000394225 SEPT12Q8IYM1 358 aa20.48■□□□□ 0.87
NDUFC1-202ENST00000394225 WNK3Q9BYP7 1800 aa20.48■□□□□ 0.87
NDUFC1-202ENST00000394225 NBPF6Q5VWK0 638 aa20.47■□□□□ 0.87
NDUFC1-202ENST00000394225 NBPF4Q96M43 638 aa20.47■□□□□ 0.87
NDUFC1-202ENST00000394225 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
NDUFC1-202ENST00000394225 PRKRIP1Q9H875 184 aaPredicted RBP20.46■□□□□ 0.87
NDUFC1-202ENST00000394225 PARP4Q9UKK3 1724 aaKnown RBP20.45■□□□□ 0.86
NDUFC1-202ENST00000394225 MYBBP1AQ9BQG0 1328 aaKnown RBP20.45■□□□□ 0.86
NDUFC1-202ENST00000394225 DISP2A7MBM2 1401 aa20.44■□□□□ 0.86
NDUFC1-202ENST00000394225 DIAPH1O60610 1272 aaKnown RBP20.44■□□□□ 0.86
NDUFC1-202ENST00000394225 IL2RBP14784 551 aa20.44■□□□□ 0.86
NDUFC1-202ENST00000394225 ILDR2Q71H61 639 aa20.44■□□□□ 0.86
NDUFC1-202ENST00000394225 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
NDUFC1-202ENST00000394225 EYA1Q99502 592 aa20.43■□□□□ 0.86
NDUFC1-202ENST00000394225 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
NDUFC1-202ENST00000394225 IL13P35225 146 aa20.42■□□□□ 0.86
NDUFC1-202ENST00000394225 USHBP1Q8N6Y0 703 aa20.42■□□□□ 0.86
NDUFC1-202ENST00000394225 IGSF1Q8N6C5 1336 aa20.42■□□□□ 0.86
NDUFC1-202ENST00000394225 ANP32CO43423 234 aa20.41■□□□□ 0.86
NDUFC1-202ENST00000394225 RAPGEF4Q8WZA2 1011 aa20.41■□□□□ 0.86
NDUFC1-202ENST00000394225 LRRC37A3O60309 1634 aa20.41■□□□□ 0.86
NDUFC1-202ENST00000394225 DDB1Q16531 1140 aa20.4■□□□□ 0.86
NDUFC1-202ENST00000394225 BRWD3Q6RI45 1802 aa20.4■□□□□ 0.86
NDUFC1-202ENST00000394225 RNF216Q9NWF9 866 aaPredicted RBP20.4■□□□□ 0.86
NDUFC1-202ENST00000394225 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.86
NDUFC1-202ENST00000394225 PDE3BQ13370 1112 aa20.39■□□□□ 0.85
NDUFC1-202ENST00000394225 KRT27Q7Z3Y8 459 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms