RNA–Protein interactions for RNA: ENST00000384619.1

RNVU1-17-201, Transcript of RNA, variant U1 small nuclear 17, humanhuman

BASIC

Gene RNVU1-17, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-17-201ENST00000384619 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.29
RNVU1-17-201ENST00000384619 FNBP4Q8N3X1 1017 aaPredicted RBP13.27□□□□□ -0.29
RNVU1-17-201ENST00000384619 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
RNVU1-17-201ENST00000384619 BTG4Q9NY30 223 aa13.27□□□□□ -0.29
RNVU1-17-201ENST00000384619 NFAT5O94916 1531 aa13.27□□□□□ -0.29
RNVU1-17-201ENST00000384619 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
RNVU1-17-201ENST00000384619 IL13P35225 146 aa13.26□□□□□ -0.29
RNVU1-17-201ENST00000384619 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
RNVU1-17-201ENST00000384619 USP54Q70EL1 1684 aa13.26□□□□□ -0.29
RNVU1-17-201ENST00000384619 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
RNVU1-17-201ENST00000384619 CDK12Q9NYV4 1490 aaPredicted RBP13.26□□□□□ -0.29
RNVU1-17-201ENST00000384619 U2SURPO15042 1029 aaKnown RBP13.25□□□□□ -0.29
RNVU1-17-201ENST00000384619 PNISRQ8TF01 805 aaKnown RBP13.25□□□□□ -0.29
RNVU1-17-201ENST00000384619 LTV1Q96GA3 475 aaPredicted RBP13.25□□□□□ -0.29
RNVU1-17-201ENST00000384619 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
RNVU1-17-201ENST00000384619 ERBB3P21860 1342 aa13.24□□□□□ -0.29
RNVU1-17-201ENST00000384619 FCHSD2O94868 740 aa13.24□□□□□ -0.29
RNVU1-17-201ENST00000384619 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
RNVU1-17-201ENST00000384619 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
RNVU1-17-201ENST00000384619 ILDR1Q86SU0 546 aaPredicted RBP13.24□□□□□ -0.29
RNVU1-17-201ENST00000384619 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
RNVU1-17-201ENST00000384619 NLRP2Q9NX02 1062 aa13.24□□□□□ -0.29
RNVU1-17-201ENST00000384619 ABCC6O95255 1503 aa13.23□□□□□ -0.29
RNVU1-17-201ENST00000384619 WDR17Q8IZU2 1322 aa13.23□□□□□ -0.29
RNVU1-17-201ENST00000384619 NEFMP07197 916 aa13.23□□□□□ -0.29
RNVU1-17-201ENST00000384619 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
RNVU1-17-201ENST00000384619 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
RNVU1-17-201ENST00000384619 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
RNVU1-17-201ENST00000384619 USP21Q9UK80 565 aa13.23□□□□□ -0.29
RNVU1-17-201ENST00000384619 SHPRHQ149N8 1683 aa13.23□□□□□ -0.29
RNVU1-17-201ENST00000384619 ZNF772Q68DY9 489 aaPredicted RBP13.22□□□□□ -0.29
RNVU1-17-201ENST00000384619 EYA1Q99502 592 aa13.22□□□□□ -0.29
RNVU1-17-201ENST00000384619 CARD10Q9BWT7 1032 aa13.22□□□□□ -0.29
RNVU1-17-201ENST00000384619 ANKRD26Q9UPS8 1709 aa13.22□□□□□ -0.29
RNVU1-17-201ENST00000384619 NBPF6Q5VWK0 638 aa13.21□□□□□ -0.29
RNVU1-17-201ENST00000384619 NBPF4Q96M43 638 aa13.21□□□□□ -0.29
RNVU1-17-201ENST00000384619 THRAP3Q9Y2W1 955 aaKnown RBP13.21□□□□□ -0.29
RNVU1-17-201ENST00000384619 VPS72Q15906 364 aa13.2□□□□□ -0.3
RNVU1-17-201ENST00000384619 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
RNVU1-17-201ENST00000384619 LARP1Q6PKG0 1096 aaKnown RBP13.2□□□□□ -0.3
RNVU1-17-201ENST00000384619 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
RNVU1-17-201ENST00000384619 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
RNVU1-17-201ENST00000384619 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
RNVU1-17-201ENST00000384619 SLIT2O94813 1529 aa13.19□□□□□ -0.3
RNVU1-17-201ENST00000384619 AFF2P51816 1311 aa13.19□□□□□ -0.3
RNVU1-17-201ENST00000384619 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
RNVU1-17-201ENST00000384619 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
RNVU1-17-201ENST00000384619 CDCA7Q9BWT1 371 aaPredicted RBP13.19□□□□□ -0.3
RNVU1-17-201ENST00000384619 TRPC5Q9UL62 973 aaPredicted RBP13.19□□□□□ -0.3
RNVU1-17-201ENST00000384619 CAMTA1Q9Y6Y1 1673 aa13.18□□□□□ -0.3
RNVU1-17-201ENST00000384619 COL5A2P05997 1499 aaPredicted RBP13.18□□□□□ -0.3
RNVU1-17-201ENST00000384619 LRP6O75581 1613 aa13.18□□□□□ -0.3
RNVU1-17-201ENST00000384619 PHRF1Q9P1Y6 1649 aaKnown RBP13.18□□□□□ -0.3
RNVU1-17-201ENST00000384619 TCP11L2Q8N4U5 519 aa13.18□□□□□ -0.3
RNVU1-17-201ENST00000384619 CRB1P82279 1406 aa13.18□□□□□ -0.3
RNVU1-17-201ENST00000384619 HMOX1P09601 288 aa13.17□□□□□ -0.3
RNVU1-17-201ENST00000384619 QTRT2Q9H974 415 aaKnown RBP13.17□□□□□ -0.3
RNVU1-17-201ENST00000384619 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 SPATA31A5Q5VU36 1347 aa13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 SPATA31A7Q8IWB4 1347 aa13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 BARGINQ6ZT62 677 aa13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 RUNDC1Q96C34 613 aa13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 COL14A1Q05707 1796 aaKnown RBP13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
RNVU1-17-201ENST00000384619 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 IL2RBP14784 551 aa13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 PRKAR2BP31323 418 aa13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 NGEFQ8N5V2 710 aa13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 GJD4Q96KN9 370 aaPredicted RBP13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 USP35Q9P2H5 1018 aa13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 KDRP35968 1356 aa13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
RNVU1-17-201ENST00000384619 MAPK8IP3Q9UPT6 1336 aa13.14□□□□□ -0.31
RNVU1-17-201ENST00000384619 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
RNVU1-17-201ENST00000384619 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
RNVU1-17-201ENST00000384619 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
RNVU1-17-201ENST00000384619 PLEKHF1Q96S99 279 aa13.13□□□□□ -0.31
RNVU1-17-201ENST00000384619 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
RNVU1-17-201ENST00000384619 EXOC5O00471 708 aa13.12□□□□□ -0.31
RNVU1-17-201ENST00000384619 ONECUT3O60422 494 aaPredicted RBP13.12□□□□□ -0.31
RNVU1-17-201ENST00000384619 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
RNVU1-17-201ENST00000384619 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
RNVU1-17-201ENST00000384619 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
RNVU1-17-201ENST00000384619 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
RNVU1-17-201ENST00000384619 ABCA3Q99758 1704 aa13.11□□□□□ -0.31
RNVU1-17-201ENST00000384619 ZCRB1Q8TBF4 217 aaKnown RBP13.11□□□□□ -0.31
RNVU1-17-201ENST00000384619 COL18A1P39060 1754 aa13.11□□□□□ -0.31
RNVU1-17-201ENST00000384619 NCAPD2Q15021 1401 aa13.11□□□□□ -0.31
RNVU1-17-201ENST00000384619 RXRBP28702 533 aa13.1□□□□□ -0.31
RNVU1-17-201ENST00000384619 CCDC146Q8IYE0 955 aa13.1□□□□□ -0.31
RNVU1-17-201ENST00000384619 MAP2P11137 1827 aaKnown RBP13.1□□□□□ -0.31
RNVU1-17-201ENST00000384619 APAF1O14727 1248 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms