RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 AMPHP49418 695 aa25.44■■□□□ 1.66
SMN2-202ENST00000380742 MTHFSP49914 203 aa25.44■■□□□ 1.66
SMN2-202ENST00000380742 MEX3CQ5U5Q3 659 aaKnown RBP25.44■■□□□ 1.66
SMN2-202ENST00000380742 C8orf37Q96NL8 207 aa25.44■■□□□ 1.66
SMN2-202ENST00000380742 AXIN2Q9Y2T1 843 aa25.44■■□□□ 1.66
SMN2-202ENST00000380742 HOXC9P31274 260 aa25.43■■□□□ 1.66
SMN2-202ENST00000380742 IP6K1Q92551 441 aa25.43■■□□□ 1.66
SMN2-202ENST00000380742 RTL1A6NKG5 1358 aa25.43■■□□□ 1.66
SMN2-202ENST00000380742 KIF24Q5T7B8 1368 aa25.43■■□□□ 1.66
SMN2-202ENST00000380742 MYBBP1AQ9BQG0 1328 aaKnown RBP25.42■■□□□ 1.66
SMN2-202ENST00000380742 NRAPQ86VF7 1730 aa25.42■■□□□ 1.66
SMN2-202ENST00000380742 FLT4P35916 1363 aa25.42■■□□□ 1.66
SMN2-202ENST00000380742 CDK12Q9NYV4 1490 aaPredicted RBP25.41■■□□□ 1.66
SMN2-202ENST00000380742 SLIT2O94813 1529 aa25.41■■□□□ 1.66
SMN2-202ENST00000380742 NGLY1Q96IV0 654 aa25.4■■□□□ 1.66
SMN2-202ENST00000380742 HSP90AB2PQ58FF8 381 aa25.39■■□□□ 1.65
SMN2-202ENST00000380742 BTG4Q9NY30 223 aa25.39■■□□□ 1.65
SMN2-202ENST00000380742 RGPD2P0DJD1 1756 aa25.38■■□□□ 1.65
SMN2-202ENST00000380742 BLMP54132 1417 aaPredicted RBP25.38■■□□□ 1.65
SMN2-202ENST00000380742 FNBP4Q8N3X1 1017 aaPredicted RBP25.37■■□□□ 1.65
SMN2-202ENST00000380742 COL5A2P05997 1499 aaPredicted RBP25.37■■□□□ 1.65
SMN2-202ENST00000380742 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.37■■□□□ 1.65
SMN2-202ENST00000380742 INSRP06213 1382 aa25.37■■□□□ 1.65
SMN2-202ENST00000380742 COL3A1P02461 1466 aaPredicted RBP25.35■■□□□ 1.65
SMN2-202ENST00000380742 BCL9LQ86UU0 1499 aa25.35■■□□□ 1.65
SMN2-202ENST00000380742 AFF2P51816 1311 aa25.34■■□□□ 1.65
SMN2-202ENST00000380742 FAM208AQ9UK61 1670 aaKnown RBP25.33■■□□□ 1.64
SMN2-202ENST00000380742 ANKRD24Q8TF21 1146 aa25.32■■□□□ 1.64
SMN2-202ENST00000380742 LTV1Q96GA3 475 aaPredicted RBP25.32■■□□□ 1.64
SMN2-202ENST00000380742 STRN4Q9NRL3 753 aa25.31■■□□□ 1.64
SMN2-202ENST00000380742 ERBB3P21860 1342 aa25.31■■□□□ 1.64
SMN2-202ENST00000380742 USP21Q9UK80 565 aa25.31■■□□□ 1.64
SMN2-202ENST00000380742 EVA1CP58658 441 aa25.3■■□□□ 1.64
SMN2-202ENST00000380742 EIF4A2Q14240 407 aaKnown RBP25.3■■□□□ 1.64
SMN2-202ENST00000380742 UNC5CLQ8IV45 518 aa25.3■■□□□ 1.64
SMN2-202ENST00000380742 CCDC184Q52MB2 194 aa25.29■■□□□ 1.64
SMN2-202ENST00000380742 MIER1Q8N108 512 aa25.29■■□□□ 1.64
SMN2-202ENST00000380742 CFAP53Q96M91 514 aa25.29■■□□□ 1.64
SMN2-202ENST00000380742 RGPD1P0DJD0 1748 aa25.28■■□□□ 1.64
SMN2-202ENST00000380742 WDR17Q8IZU2 1322 aa25.28■■□□□ 1.64
SMN2-202ENST00000380742 LARP1Q6PKG0 1096 aaKnown RBP25.28■■□□□ 1.64
SMN2-202ENST00000380742 IL13P35225 146 aa25.27■■□□□ 1.64
SMN2-202ENST00000380742 DIAPH1O60610 1272 aaKnown RBP25.26■■□□□ 1.63
SMN2-202ENST00000380742 CSB-PGBD3P0DP91 1061 aa25.25■■□□□ 1.63
SMN2-202ENST00000380742 CRB1P82279 1406 aa25.24■■□□□ 1.63
SMN2-202ENST00000380742 NBPF6Q5VWK0 638 aa25.23■■□□□ 1.63
SMN2-202ENST00000380742 TOM1L2Q6ZVM7 507 aa25.23■■□□□ 1.63
SMN2-202ENST00000380742 NBPF4Q96M43 638 aa25.23■■□□□ 1.63
SMN2-202ENST00000380742 ATRNO75882 1429 aa25.22■■□□□ 1.63
SMN2-202ENST00000380742 VPS72Q15906 364 aa25.22■■□□□ 1.63
SMN2-202ENST00000380742 RGS17Q9UGC6 210 aaPredicted RBP25.22■■□□□ 1.63
SMN2-202ENST00000380742 EYA1Q99502 592 aa25.21■■□□□ 1.63
SMN2-202ENST00000380742 NLRP2Q9NX02 1062 aa25.21■■□□□ 1.63
SMN2-202ENST00000380742 WNK3Q9BYP7 1800 aa25.2■■□□□ 1.62
SMN2-202ENST00000380742 ZNF772Q68DY9 489 aaPredicted RBP25.19■■□□□ 1.62
SMN2-202ENST00000380742 CARD10Q9BWT7 1032 aa25.19■■□□□ 1.62
SMN2-202ENST00000380742 MRS2Q9HD23 443 aa25.19■■□□□ 1.62
SMN2-202ENST00000380742 TRPC5Q9UL62 973 aaPredicted RBP25.19■■□□□ 1.62
SMN2-202ENST00000380742 SPATA31A5Q5VU36 1347 aa25.19■■□□□ 1.62
SMN2-202ENST00000380742 SPATA31A7Q8IWB4 1347 aa25.19■■□□□ 1.62
SMN2-202ENST00000380742 IGSF1Q8N6C5 1336 aa25.19■■□□□ 1.62
SMN2-202ENST00000380742 USHBP1Q8N6Y0 703 aa25.18■■□□□ 1.62
SMN2-202ENST00000380742 QTRT2Q9H974 415 aaKnown RBP25.18■■□□□ 1.62
SMN2-202ENST00000380742 GLI3P10071 1580 aa25.18■■□□□ 1.62
SMN2-202ENST00000380742 NCAPD2Q15021 1401 aa25.18■■□□□ 1.62
SMN2-202ENST00000380742 SPATA31A1Q5TZJ5 1347 aa25.18■■□□□ 1.62
SMN2-202ENST00000380742 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
SMN2-202ENST00000380742 USP35Q9P2H5 1018 aa25.18■■□□□ 1.62
SMN2-202ENST00000380742 CCDC9Q9Y3X0 531 aaKnown RBP25.18■■□□□ 1.62
SMN2-202ENST00000380742 CCER2I3L3R5 266 aa25.17■■□□□ 1.62
SMN2-202ENST00000380742 U2SURPO15042 1029 aaKnown RBP25.17■■□□□ 1.62
SMN2-202ENST00000380742 NUDCQ9Y266 331 aa25.17■■□□□ 1.62
SMN2-202ENST00000380742 GJD4Q96KN9 370 aaPredicted RBP25.15■■□□□ 1.62
SMN2-202ENST00000380742 AEBP1Q8IUX7 1158 aa25.14■■□□□ 1.61
SMN2-202ENST00000380742 U2AF1L5P0DN76 240 aaPredicted RBP25.12■■□□□ 1.61
SMN2-202ENST00000380742 U2AF1Q01081 240 aaKnown RBP eCLIP25.12■■□□□ 1.61
SMN2-202ENST00000380742 SULT6B1Q6IMI4 303 aa25.12■■□□□ 1.61
SMN2-202ENST00000380742 POTEAQ6S8J7 498 aa25.12■■□□□ 1.61
SMN2-202ENST00000380742 TCP11L2Q8N4U5 519 aa25.12■■□□□ 1.61
SMN2-202ENST00000380742 KDRP35968 1356 aa25.12■■□□□ 1.61
SMN2-202ENST00000380742 HMOX1P09601 288 aa25.11■■□□□ 1.61
SMN2-202ENST00000380742 PNISRQ8TF01 805 aaKnown RBP25.11■■□□□ 1.61
SMN2-202ENST00000380742 PARP4Q9UKK3 1724 aaKnown RBP25.11■■□□□ 1.61
SMN2-202ENST00000380742 THRAP3Q9Y2W1 955 aaKnown RBP25.1■■□□□ 1.61
SMN2-202ENST00000380742 DISP2A7MBM2 1401 aa25.09■■□□□ 1.61
SMN2-202ENST00000380742 MEGF6O75095 1541 aa25.09■■□□□ 1.61
SMN2-202ENST00000380742 WDR43Q15061 677 aaKnown RBP eCLIP25.08■■□□□ 1.61
SMN2-202ENST00000380742 BARGINQ6ZT62 677 aa25.08■■□□□ 1.61
SMN2-202ENST00000380742 THSD7AQ9UPZ6 1657 aa25.08■■□□□ 1.61
SMN2-202ENST00000380742 FAM98CQ17RN3 349 aaKnown RBP25.07■■□□□ 1.6
SMN2-202ENST00000380742 ADAMTS8Q9UP79 889 aa25.07■■□□□ 1.6
SMN2-202ENST00000380742 RBM6P78332 1123 aaKnown RBP25.06■■□□□ 1.6
SMN2-202ENST00000380742 RSPH6AQ9H0K4 717 aa25.06■■□□□ 1.6
SMN2-202ENST00000380742 IL2RBP14784 551 aa25.05■■□□□ 1.6
SMN2-202ENST00000380742 SHANK3Q9BYB0 1731 aa25.05■■□□□ 1.6
SMN2-202ENST00000380742 RAPGEF4Q8WZA2 1011 aa25.05■■□□□ 1.6
SMN2-202ENST00000380742 PKD1L3Q7Z443 1732 aa25.04■■□□□ 1.6
SMN2-202ENST00000380742 ONECUT3O60422 494 aaPredicted RBP25.04■■□□□ 1.6
SMN2-202ENST00000380742 FCHSD2O94868 740 aa25.04■■□□□ 1.6
SMN2-202ENST00000380742 LRRC37A3O60309 1634 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms