RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 RRS1Q15050 365 aaKnown RBP29.69■■■□□ 2.34
VPS16-201ENST00000380443 PROSER2Q86WR7 435 aaPredicted RBP29.69■■■□□ 2.34
VPS16-201ENST00000380443 TSR2Q969E8 191 aaKnown RBP29.68■■■□□ 2.34
VPS16-201ENST00000380443 PANK1Q8TE04 598 aa29.67■■■□□ 2.34
VPS16-201ENST00000380443 HMOX1P09601 288 aa29.66■■■□□ 2.34
VPS16-201ENST00000380443 PDE4AP27815 886 aa29.66■■■□□ 2.34
VPS16-201ENST00000380443 ALDH1L2Q3SY69 923 aa29.66■■■□□ 2.34
VPS16-201ENST00000380443 COG6Q9Y2V7 657 aa29.66■■■□□ 2.34
VPS16-201ENST00000380443 NGDNQ8NEJ9 315 aaKnown RBP29.66■■■□□ 2.34
VPS16-201ENST00000380443 BACH2Q9BYV9 841 aa29.66■■■□□ 2.34
VPS16-201ENST00000380443 FMN2Q9NZ56 1722 aa29.65■■■□□ 2.34
VPS16-201ENST00000380443 PHACTR3Q96KR7 559 aa29.65■■■□□ 2.34
VPS16-201ENST00000380443 NUTM2FA1L443 756 aa29.64■■■□□ 2.34
VPS16-201ENST00000380443 GNAI1P63096 354 aa29.64■■■□□ 2.34
VPS16-201ENST00000380443 PMFBP1Q8TBY8 1022 aa29.64■■■□□ 2.34
VPS16-201ENST00000380443 IFT57Q9NWB7 429 aa29.64■■■□□ 2.34
VPS16-201ENST00000380443 TMEM94Q12767 1356 aa29.63■■■□□ 2.33
VPS16-201ENST00000380443 ANP32AP39687 249 aaKnown RBP29.63■■■□□ 2.33
VPS16-201ENST00000380443 SMC4Q9NTJ3 1288 aa29.63■■■□□ 2.33
VPS16-201ENST00000380443 BRPF1P55201 1214 aaPredicted RBP29.62■■■□□ 2.33
VPS16-201ENST00000380443 IPO8O15397 1037 aaKnown RBP29.61■■■□□ 2.33
VPS16-201ENST00000380443 KIF16BQ96L93 1317 aa29.61■■■□□ 2.33
VPS16-201ENST00000380443 EIF4A2Q14240 407 aaKnown RBP29.61■■■□□ 2.33
VPS16-201ENST00000380443 DZIP1LQ8IYY4 767 aaKnown RBP29.61■■■□□ 2.33
VPS16-201ENST00000380443 NCOA3Q9Y6Q9 1424 aa29.6■■■□□ 2.33
VPS16-201ENST00000380443 MVPQ14764 893 aaKnown RBP29.59■■■□□ 2.33
VPS16-201ENST00000380443 FBXO41Q8TF61 875 aa29.59■■■□□ 2.33
VPS16-201ENST00000380443 SSH1Q8WYL5 1049 aa29.59■■■□□ 2.33
VPS16-201ENST00000380443 ZNF853P0CG23 659 aa29.59■■■□□ 2.33
VPS16-201ENST00000380443 KIF24Q5T7B8 1368 aa29.59■■■□□ 2.33
VPS16-201ENST00000380443 FTSJ3Q8IY81 847 aaKnown RBP29.58■■■□□ 2.33
VPS16-201ENST00000380443 BCL2L13Q9BXK5 485 aa29.58■■■□□ 2.33
VPS16-201ENST00000380443 RGPD8O14715 1765 aaPredicted RBP29.58■■■□□ 2.33
VPS16-201ENST00000380443 SBNO1A3KN83 1393 aa29.57■■■□□ 2.32
VPS16-201ENST00000380443 MSH5O43196 834 aa29.57■■■□□ 2.32
VPS16-201ENST00000380443 USP54Q70EL1 1684 aa29.57■■■□□ 2.32
VPS16-201ENST00000380443 ANP32EQ9BTT0 268 aa29.57■■■□□ 2.32
VPS16-201ENST00000380443 RLBP1P12271 317 aa29.57■■■□□ 2.32
VPS16-201ENST00000380443 XIRP1Q702N8 1843 aaKnown RBP29.56■■■□□ 2.32
VPS16-201ENST00000380443 RGPD1P0DJD0 1748 aa29.56■■■□□ 2.32
VPS16-201ENST00000380443 ARHGEF10O15013 1369 aa29.55■■■□□ 2.32
VPS16-201ENST00000380443 ATF7IPQ6VMQ6 1270 aa29.55■■■□□ 2.32
VPS16-201ENST00000380443 RBM33Q96EV2 1170 aaKnown RBP29.55■■■□□ 2.32
VPS16-201ENST00000380443 PEAK1Q9H792 1746 aa29.55■■■□□ 2.32
VPS16-201ENST00000380443 FLT4P35916 1363 aa29.55■■■□□ 2.32
VPS16-201ENST00000380443 TOM1O60784 492 aa29.55■■■□□ 2.32
VPS16-201ENST00000380443 C14orf37Q86TY3 774 aa29.55■■■□□ 2.32
VPS16-201ENST00000380443 CFAP44Q96MT7 982 aa29.55■■■□□ 2.32
VPS16-201ENST00000380443 UBAP1LF5GYI3 381 aa29.54■■■□□ 2.32
VPS16-201ENST00000380443 MSH6P52701 1360 aa29.53■■■□□ 2.32
VPS16-201ENST00000380443 IGHDP01880 384 aa29.52■■■□□ 2.32
VPS16-201ENST00000380443 DDX19BQ9UMR2 479 aa29.52■■■□□ 2.32
VPS16-201ENST00000380443 DLG5Q8TDM6 1919 aa29.52■■■□□ 2.32
VPS16-201ENST00000380443 SULT6B1Q6IMI4 303 aa29.52■■■□□ 2.32
VPS16-201ENST00000380443 RWDD1Q9H446 243 aaPredicted RBP29.52■■■□□ 2.32
VPS16-201ENST00000380443 PIK3C2AO00443 1686 aa29.51■■■□□ 2.32
VPS16-201ENST00000380443 MAP3K19Q56UN5 1328 aa29.51■■■□□ 2.31
VPS16-201ENST00000380443 TRIM27P14373 513 aa29.5■■■□□ 2.31
VPS16-201ENST00000380443 HAP1P54257 671 aaPredicted RBP29.49■■■□□ 2.31
VPS16-201ENST00000380443 HSP90AB2PQ58FF8 381 aa29.49■■■□□ 2.31
VPS16-201ENST00000380443 ERICH6Q7L0X2 663 aa29.49■■■□□ 2.31
VPS16-201ENST00000380443 ARHGAP45Q92619 1136 aa29.49■■■□□ 2.31
VPS16-201ENST00000380443 IPO9Q96P70 1041 aaKnown RBP29.49■■■□□ 2.31
VPS16-201ENST00000380443 NOB1Q9ULX3 412 aaKnown RBP29.49■■■□□ 2.31
VPS16-201ENST00000380443 ADGRL3Q9HAR2 1447 aa29.48■■■□□ 2.31
VPS16-201ENST00000380443 FAM161AQ3B820 660 aa29.48■■■□□ 2.31
VPS16-201ENST00000380443 CHMP4BQ9H444 224 aaKnown RBP29.48■■■□□ 2.31
VPS16-201ENST00000380443 C19orf44Q9H6X5 657 aa29.48■■■□□ 2.31
VPS16-201ENST00000380443 LAS1LQ9Y4W2 734 aaKnown RBP29.48■■■□□ 2.31
VPS16-201ENST00000380443 VAMP4O75379 141 aa29.47■■■□□ 2.31
VPS16-201ENST00000380443 TNNQ9UQP3 1299 aa29.47■■■□□ 2.31
VPS16-201ENST00000380443 NLRP6P59044 892 aa29.46■■■□□ 2.31
VPS16-201ENST00000380443 MBIPQ9NS73 344 aa29.45■■■□□ 2.31
VPS16-201ENST00000380443 PHF8Q9UPP1 1060 aa29.45■■■□□ 2.31
VPS16-201ENST00000380443 PCDHB15Q9Y5E8 787 aa29.45■■■□□ 2.3
VPS16-201ENST00000380443 KDRP35968 1356 aa29.44■■■□□ 2.3
VPS16-201ENST00000380443 AMPHP49418 695 aa29.44■■■□□ 2.3
VPS16-201ENST00000380443 AEBP1Q8IUX7 1158 aa29.43■■■□□ 2.3
VPS16-201ENST00000380443 ATF3P18847 181 aa29.42■■■□□ 2.3
VPS16-201ENST00000380443 THUMPD2Q9BTF0 503 aaKnown RBP29.42■■■□□ 2.3
VPS16-201ENST00000380443 CADPS2Q86UW7 1296 aa29.41■■■□□ 2.3
VPS16-201ENST00000380443 MRPL50Q8N5N7 158 aaKnown RBP29.41■■■□□ 2.3
VPS16-201ENST00000380443 NOP58Q9Y2X3 529 aaKnown RBP29.41■■■□□ 2.3
VPS16-201ENST00000380443 IGSF1Q8N6C5 1336 aa29.4■■■□□ 2.3
VPS16-201ENST00000380443 DCCP43146 1447 aa29.4■■■□□ 2.3
VPS16-201ENST00000380443 RTL1A6NKG5 1358 aa29.4■■■□□ 2.3
VPS16-201ENST00000380443 HDAC1Q13547 482 aaPredicted RBP29.39■■■□□ 2.3
VPS16-201ENST00000380443 TWISTNBQ3B726 338 aaPredicted RBP29.39■■■□□ 2.3
VPS16-201ENST00000380443 ILDR1Q86SU0 546 aaPredicted RBP29.38■■■□□ 2.29
VPS16-201ENST00000380443 SKAP1Q86WV1 359 aa29.38■■■□□ 2.29
VPS16-201ENST00000380443 ITPRIPQ8IWB1 547 aa29.38■■■□□ 2.29
VPS16-201ENST00000380443 ABTB2Q8N961 1025 aa29.38■■■□□ 2.29
VPS16-201ENST00000380443 MARF1Q9Y4F3 1742 aaKnown RBP29.38■■■□□ 2.29
VPS16-201ENST00000380443 RGS3P49796 1198 aa29.38■■■□□ 2.29
VPS16-201ENST00000380443 PIP4K2BP78356 416 aa29.38■■■□□ 2.29
VPS16-201ENST00000380443 KIAA0232Q92628 1395 aa29.37■■■□□ 2.29
VPS16-201ENST00000380443 CHL1O00533 1208 aa29.36■■■□□ 2.29
VPS16-201ENST00000380443 HTATSF1O43719 755 aaKnown RBP29.36■■■□□ 2.29
VPS16-201ENST00000380443 TMEM57Q8N5G2 664 aa29.36■■■□□ 2.29
VPS16-201ENST00000380443 GAS2L2Q8NHY3 880 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms