RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 MTERF4Q7Z6M4 381 aaKnown RBP15.62■□□□□ 0.09
HIPK3-202ENST00000379016 SRRTQ9BXP5 876 aaKnown RBP15.62■□□□□ 0.09
HIPK3-202ENST00000379016 MAP3K9P80192 1104 aa15.62■□□□□ 0.09
HIPK3-202ENST00000379016 TSPYL4Q9UJ04 414 aa15.62■□□□□ 0.09
HIPK3-202ENST00000379016 HMOX1P09601 288 aa15.62■□□□□ 0.09
HIPK3-202ENST00000379016 UBA5Q9GZZ9 404 aa15.61■□□□□ 0.09
HIPK3-202ENST00000379016 PDE4AP27815 886 aa15.61■□□□□ 0.09
HIPK3-202ENST00000379016 TRMT1LQ7Z2T5 733 aaKnown RBP15.61■□□□□ 0.09
HIPK3-202ENST00000379016 TSNARE1Q96NA8 513 aa15.61■□□□□ 0.09
HIPK3-202ENST00000379016 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
HIPK3-202ENST00000379016 STRN4Q9NRL3 753 aa15.61■□□□□ 0.09
HIPK3-202ENST00000379016 FIBPO43427 364 aa15.61■□□□□ 0.09
HIPK3-202ENST00000379016 LNPKQ9C0E8 428 aa15.61■□□□□ 0.09
HIPK3-202ENST00000379016 CCDC150Q8NCX0 1101 aa15.61■□□□□ 0.09
HIPK3-202ENST00000379016 SHTN1A0MZ66 631 aa15.6■□□□□ 0.09
HIPK3-202ENST00000379016 NAP1L3Q99457 506 aaPredicted RBP15.6■□□□□ 0.09
HIPK3-202ENST00000379016 DACH1Q9UI36 760 aa15.6■□□□□ 0.09
HIPK3-202ENST00000379016 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
HIPK3-202ENST00000379016 LETM1O95202 739 aaPredicted RBP15.6■□□□□ 0.09
HIPK3-202ENST00000379016 ME1P48163 572 aa15.6■□□□□ 0.09
HIPK3-202ENST00000379016 FLIIQ13045 1269 aa15.6■□□□□ 0.09
HIPK3-202ENST00000379016 OTUD6BQ8N6M0 293 aa15.59■□□□□ 0.09
HIPK3-202ENST00000379016 PKNOX2Q96KN3 472 aa15.59■□□□□ 0.09
HIPK3-202ENST00000379016 PIP4K2BP78356 416 aa15.59■□□□□ 0.09
HIPK3-202ENST00000379016 PPP1R14CQ8TAE6 165 aa15.59■□□□□ 0.09
HIPK3-202ENST00000379016 CRACR2AQ9BSW2 395 aa15.59■□□□□ 0.09
HIPK3-202ENST00000379016 RAPGEF4Q8WZA2 1011 aa15.59■□□□□ 0.09
HIPK3-202ENST00000379016 DCAF1Q9Y4B6 1507 aa15.59■□□□□ 0.09
HIPK3-202ENST00000379016 DHX8Q14562 1220 aaKnown RBP15.59■□□□□ 0.09
HIPK3-202ENST00000379016 ZNF397Q8NF99 534 aaPredicted RBP15.59■□□□□ 0.09
HIPK3-202ENST00000379016 CLGNO14967 610 aa15.59■□□□□ 0.09
HIPK3-202ENST00000379016 WDHD1O75717 1129 aaPredicted RBP15.59■□□□□ 0.09
HIPK3-202ENST00000379016 GCOM1H8Y6P7 765 aaPredicted RBP15.58■□□□□ 0.09
HIPK3-202ENST00000379016 MYZAPP0CAP1 466 aa15.58■□□□□ 0.09
HIPK3-202ENST00000379016 CCDC148Q8NFR7 591 aa15.58■□□□□ 0.09
HIPK3-202ENST00000379016 UQCRHLA0A096LP55 91 aa15.58■□□□□ 0.08
HIPK3-202ENST00000379016 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
HIPK3-202ENST00000379016 VGFO15240 615 aaPredicted RBP15.58■□□□□ 0.08
HIPK3-202ENST00000379016 GNL3LQ9NVN8 582 aaKnown RBP15.58■□□□□ 0.08
HIPK3-202ENST00000379016 LRSAM1Q6UWE0 723 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 STAC3Q96MF2 364 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 TPD52P55327 224 aaPredicted RBP15.57■□□□□ 0.08
HIPK3-202ENST00000379016 GRM1Q13255 1194 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 PPP1R9BQ96SB3 815 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 NLRP2Q9NX02 1062 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 CCDC96Q2M329 555 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 TMX1Q9H3N1 280 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 SEPT6Q14141 434 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 TRIM22Q8IYM9 498 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 ROCK1Q13464 1354 aa15.57■□□□□ 0.08
HIPK3-202ENST00000379016 SLU7O95391 586 aaKnown RBP15.56■□□□□ 0.08
HIPK3-202ENST00000379016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.56■□□□□ 0.08
HIPK3-202ENST00000379016 PRPF40AO75400 957 aaKnown RBP15.56■□□□□ 0.08
HIPK3-202ENST00000379016 TRERF1Q96PN7 1200 aa15.56■□□□□ 0.08
HIPK3-202ENST00000379016 SATB1Q01826 763 aa15.56■□□□□ 0.08
HIPK3-202ENST00000379016 MPHOSPH9Q99550 1183 aa15.56■□□□□ 0.08
HIPK3-202ENST00000379016 TNMDQ9H2S6 317 aa15.56■□□□□ 0.08
HIPK3-202ENST00000379016 GTPBP4Q9BZE4 634 aaKnown RBP15.56■□□□□ 0.08
HIPK3-202ENST00000379016 RAI14Q9P0K7 980 aa15.56■□□□□ 0.08
HIPK3-202ENST00000379016 PPP1R12BO60237 982 aaPredicted RBP15.56■□□□□ 0.08
HIPK3-202ENST00000379016 SPECC1Q5M775 1068 aa15.56■□□□□ 0.08
HIPK3-202ENST00000379016 PUF60Q9UHX1 559 aaKnown RBP15.56■□□□□ 0.08
HIPK3-202ENST00000379016 TNIP1Q15025 636 aa15.55■□□□□ 0.08
HIPK3-202ENST00000379016 MXRA7P84157 204 aa15.55■□□□□ 0.08
HIPK3-202ENST00000379016 UBTFL1P0CB47 393 aaPredicted RBP15.55■□□□□ 0.08
HIPK3-202ENST00000379016 CEP57L1Q8IYX8 460 aa15.55■□□□□ 0.08
HIPK3-202ENST00000379016 LUZP1Q86V48 1076 aa15.55■□□□□ 0.08
HIPK3-202ENST00000379016 PANK3Q9H999 370 aa15.55■□□□□ 0.08
HIPK3-202ENST00000379016 ATF3P18847 181 aa15.55■□□□□ 0.08
HIPK3-202ENST00000379016 CCER2I3L3R5 266 aa15.54■□□□□ 0.08
HIPK3-202ENST00000379016 NDC80O14777 642 aa15.54■□□□□ 0.08
HIPK3-202ENST00000379016 UQCRHP07919 91 aa15.54■□□□□ 0.08
HIPK3-202ENST00000379016 CCDC57Q2TAC2 916 aa15.54■□□□□ 0.08
HIPK3-202ENST00000379016 JMYQ8N9B5 988 aa15.54■□□□□ 0.08
HIPK3-202ENST00000379016 MAP4K4O95819 1239 aaPredicted RBP15.54■□□□□ 0.08
HIPK3-202ENST00000379016 ZFP91Q96JP5 570 aaPredicted RBP15.54■□□□□ 0.08
HIPK3-202ENST00000379016 KIF7Q2M1P5 1343 aa15.54■□□□□ 0.08
HIPK3-202ENST00000379016 PAIP2Q9BPZ3 127 aaKnown RBP15.54■□□□□ 0.08
HIPK3-202ENST00000379016 SEPT10Q9P0V9 454 aa15.54■□□□□ 0.08
HIPK3-202ENST00000379016 DDX19BQ9UMR2 479 aa15.54■□□□□ 0.08
HIPK3-202ENST00000379016 RIPK4P57078 832 aa15.53■□□□□ 0.08
HIPK3-202ENST00000379016 CCDC158Q5M9N0 1113 aa15.53■□□□□ 0.08
HIPK3-202ENST00000379016 NOL7Q9UMY1 257 aaKnown RBP15.53■□□□□ 0.08
HIPK3-202ENST00000379016 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
HIPK3-202ENST00000379016 MRVI1Q9Y6F6 885 aa15.53■□□□□ 0.08
HIPK3-202ENST00000379016 C6orf163Q5TEZ5 329 aa15.53■□□□□ 0.08
HIPK3-202ENST00000379016 VTI1AQ96AJ9 217 aa15.53■□□□□ 0.08
HIPK3-202ENST00000379016 FAM184BQ9ULE4 1060 aa15.53■□□□□ 0.08
HIPK3-202ENST00000379016 ODF2LQ9ULJ1 636 aa15.53■□□□□ 0.08
HIPK3-202ENST00000379016 DZIP1LQ8IYY4 767 aaKnown RBP15.52■□□□□ 0.08
HIPK3-202ENST00000379016 FSD2A1L4K1 749 aa15.52■□□□□ 0.08
HIPK3-202ENST00000379016 PRPF4BQ13523 1007 aaKnown RBP15.52■□□□□ 0.08
HIPK3-202ENST00000379016 CACNA2D4Q7Z3S7 1137 aa15.52■□□□□ 0.08
HIPK3-202ENST00000379016 SPA17Q15506 151 aa15.52■□□□□ 0.07
HIPK3-202ENST00000379016 CBFA2T2O43439 604 aa15.52■□□□□ 0.07
HIPK3-202ENST00000379016 C22orf23Q9BZE7 217 aa15.51■□□□□ 0.07
HIPK3-202ENST00000379016 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.51■□□□□ 0.07
HIPK3-202ENST00000379016 ARHGAP29Q52LW3 1261 aa15.51■□□□□ 0.07
HIPK3-202ENST00000379016 EXOC6Q8TAG9 804 aa15.51■□□□□ 0.07
HIPK3-202ENST00000379016 FBF1Q8TES7 1133 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms