RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 ZBTB7CA1YPR0 619 aa28.7■■■□□ 2.19
CBWD3-202ENST00000377342 NUTM2BA6NNL0 878 aaPredicted RBP28.7■■■□□ 2.19
CBWD3-202ENST00000377342 NUTM2EB1AL46 878 aaPredicted RBP28.7■■■□□ 2.19
CBWD3-202ENST00000377342 CCER2I3L3R5 266 aa28.7■■■□□ 2.19
CBWD3-202ENST00000377342 NUTM2AQ8IVF1 878 aaPredicted RBP28.7■■■□□ 2.19
CBWD3-202ENST00000377342 CAMTA1Q9Y6Y1 1673 aa28.7■■■□□ 2.19
CBWD3-202ENST00000377342 CHRNA2Q15822 529 aa28.7■■■□□ 2.18
CBWD3-202ENST00000377342 PRDM11Q9NQV5 511 aa28.7■■■□□ 2.18
CBWD3-202ENST00000377342 RGPD1P0DJD0 1748 aa28.69■■■□□ 2.18
CBWD3-202ENST00000377342 NRAPQ86VF7 1730 aa28.69■■■□□ 2.18
CBWD3-202ENST00000377342 BLMP54132 1417 aaPredicted RBP28.69■■■□□ 2.18
CBWD3-202ENST00000377342 AMPHP49418 695 aa28.69■■■□□ 2.18
CBWD3-202ENST00000377342 HSP90AB2PQ58FF8 381 aa28.69■■■□□ 2.18
CBWD3-202ENST00000377342 IP6K1Q92551 441 aa28.69■■■□□ 2.18
CBWD3-202ENST00000377342 RGPD2P0DJD1 1756 aa28.68■■■□□ 2.18
CBWD3-202ENST00000377342 AXIN2Q9Y2T1 843 aa28.67■■■□□ 2.18
CBWD3-202ENST00000377342 NWD2Q9ULI1 1742 aa28.67■■■□□ 2.18
CBWD3-202ENST00000377342 ADAMTS2O95450 1211 aa28.67■■■□□ 2.18
CBWD3-202ENST00000377342 FAM83GA6ND36 823 aa28.66■■■□□ 2.18
CBWD3-202ENST00000377342 MRS2Q9HD23 443 aa28.66■■■□□ 2.18
CBWD3-202ENST00000377342 FAM208AQ9UK61 1670 aaKnown RBP28.66■■■□□ 2.18
CBWD3-202ENST00000377342 COL5A2P05997 1499 aaPredicted RBP28.64■■■□□ 2.18
CBWD3-202ENST00000377342 CFAP53Q96M91 514 aa28.64■■■□□ 2.17
CBWD3-202ENST00000377342 EIF4A2Q14240 407 aaKnown RBP28.61■■■□□ 2.17
CBWD3-202ENST00000377342 SLIT2O94813 1529 aa28.61■■■□□ 2.17
CBWD3-202ENST00000377342 ERBB3P21860 1342 aa28.6■■■□□ 2.17
CBWD3-202ENST00000377342 IL13P35225 146 aa28.59■■■□□ 2.17
CBWD3-202ENST00000377342 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.59■■■□□ 2.17
CBWD3-202ENST00000377342 DIAPH1O60610 1272 aaKnown RBP28.58■■■□□ 2.17
CBWD3-202ENST00000377342 ANKRD24Q8TF21 1146 aa28.56■■■□□ 2.16
CBWD3-202ENST00000377342 LTV1Q96GA3 475 aaPredicted RBP28.56■■■□□ 2.16
CBWD3-202ENST00000377342 PNISRQ8TF01 805 aaKnown RBP28.55■■■□□ 2.16
CBWD3-202ENST00000377342 BTG4Q9NY30 223 aa28.55■■■□□ 2.16
CBWD3-202ENST00000377342 C8orf37Q96NL8 207 aa28.54■■■□□ 2.16
CBWD3-202ENST00000377342 NCAPD2Q15021 1401 aa28.54■■■□□ 2.16
CBWD3-202ENST00000377342 BCL9LQ86UU0 1499 aa28.52■■■□□ 2.16
CBWD3-202ENST00000377342 WDR17Q8IZU2 1322 aa28.51■■■□□ 2.15
CBWD3-202ENST00000377342 IGSF1Q8N6C5 1336 aa28.51■■■□□ 2.15
CBWD3-202ENST00000377342 MEX3CQ5U5Q3 659 aaKnown RBP28.49■■■□□ 2.15
CBWD3-202ENST00000377342 ILDR1Q86SU0 546 aaPredicted RBP28.49■■■□□ 2.15
CBWD3-202ENST00000377342 EYA1Q99502 592 aa28.49■■■□□ 2.15
CBWD3-202ENST00000377342 WNK3Q9BYP7 1800 aa28.49■■■□□ 2.15
CBWD3-202ENST00000377342 FNBP4Q8N3X1 1017 aaPredicted RBP28.48■■■□□ 2.15
CBWD3-202ENST00000377342 U2SURPO15042 1029 aaKnown RBP28.48■■■□□ 2.15
CBWD3-202ENST00000377342 NGLY1Q96IV0 654 aa28.48■■■□□ 2.15
CBWD3-202ENST00000377342 NBPF6Q5VWK0 638 aa28.47■■■□□ 2.15
CBWD3-202ENST00000377342 NBPF4Q96M43 638 aa28.47■■■□□ 2.15
CBWD3-202ENST00000377342 STRN4Q9NRL3 753 aa28.47■■■□□ 2.15
CBWD3-202ENST00000377342 NUDCQ9Y266 331 aa28.47■■■□□ 2.15
CBWD3-202ENST00000377342 KDRP35968 1356 aa28.47■■■□□ 2.15
CBWD3-202ENST00000377342 CRB1P82279 1406 aa28.46■■■□□ 2.15
CBWD3-202ENST00000377342 LARP1Q6PKG0 1096 aaKnown RBP28.46■■■□□ 2.15
CBWD3-202ENST00000377342 WDR43Q15061 677 aaKnown RBP eCLIP28.45■■■□□ 2.15
CBWD3-202ENST00000377342 U2AF1L5P0DN76 240 aaPredicted RBP28.45■■■□□ 2.14
CBWD3-202ENST00000377342 U2AF1Q01081 240 aaKnown RBP eCLIP28.45■■■□□ 2.14
CBWD3-202ENST00000377342 AEBP1Q8IUX7 1158 aa28.45■■■□□ 2.14
CBWD3-202ENST00000377342 ADAMTS8Q9UP79 889 aa28.45■■■□□ 2.14
CBWD3-202ENST00000377342 CSB-PGBD3P0DP91 1061 aa28.44■■■□□ 2.14
CBWD3-202ENST00000377342 USHBP1Q8N6Y0 703 aa28.44■■■□□ 2.14
CBWD3-202ENST00000377342 AFF2P51816 1311 aa28.43■■■□□ 2.14
CBWD3-202ENST00000377342 FAM9BQ8IZU0 186 aa28.43■■■□□ 2.14
CBWD3-202ENST00000377342 HMOX1P09601 288 aa28.42■■■□□ 2.14
CBWD3-202ENST00000377342 EVA1CP58658 441 aa28.42■■■□□ 2.14
CBWD3-202ENST00000377342 UNC5CLQ8IV45 518 aa28.42■■■□□ 2.14
CBWD3-202ENST00000377342 NLRP2Q9NX02 1062 aa28.41■■■□□ 2.14
CBWD3-202ENST00000377342 SULT6B1Q6IMI4 303 aa28.4■■■□□ 2.14
CBWD3-202ENST00000377342 TOM1L2Q6ZVM7 507 aa28.4■■■□□ 2.14
CBWD3-202ENST00000377342 RSPH6AQ9H0K4 717 aa28.4■■■□□ 2.14
CBWD3-202ENST00000377342 PARP4Q9UKK3 1724 aaKnown RBP28.4■■■□□ 2.14
CBWD3-202ENST00000377342 USP21Q9UK80 565 aa28.39■■■□□ 2.14
CBWD3-202ENST00000377342 MEGF6O75095 1541 aa28.38■■■□□ 2.13
CBWD3-202ENST00000377342 CARD10Q9BWT7 1032 aa28.38■■■□□ 2.13
CBWD3-202ENST00000377342 GLI3P10071 1580 aa28.36■■■□□ 2.13
CBWD3-202ENST00000377342 ATRNO75882 1429 aa28.36■■■□□ 2.13
CBWD3-202ENST00000377342 PKD1L3Q7Z443 1732 aa28.36■■■□□ 2.13
CBWD3-202ENST00000377342 FCHSD2O94868 740 aa28.35■■■□□ 2.13
CBWD3-202ENST00000377342 SPATA31A1Q5TZJ5 1347 aa28.35■■■□□ 2.13
CBWD3-202ENST00000377342 SPATA31A5Q5VU36 1347 aa28.35■■■□□ 2.13
CBWD3-202ENST00000377342 SPATA31A7Q8IWB4 1347 aa28.35■■■□□ 2.13
CBWD3-202ENST00000377342 DISP2A7MBM2 1401 aa28.34■■■□□ 2.13
CBWD3-202ENST00000377342 VPS72Q15906 364 aa28.34■■■□□ 2.13
CBWD3-202ENST00000377342 PLEKHF1Q96S99 279 aa28.34■■■□□ 2.13
CBWD3-202ENST00000377342 SHANK3Q9BYB0 1731 aa28.33■■■□□ 2.13
CBWD3-202ENST00000377342 PRKAR2BP31323 418 aa28.33■■■□□ 2.13
CBWD3-202ENST00000377342 CCDC146Q8IYE0 955 aa28.32■■■□□ 2.12
CBWD3-202ENST00000377342 USP35Q9P2H5 1018 aa28.31■■■□□ 2.12
CBWD3-202ENST00000377342 DLG5Q8TDM6 1919 aa28.3■■■□□ 2.12
CBWD3-202ENST00000377342 OVOS2A0A0G2JMS6 1433 aa28.29■■■□□ 2.12
CBWD3-202ENST00000377342 LRRC37A3O60309 1634 aa28.29■■■□□ 2.12
CBWD3-202ENST00000377342 THSD7AQ9UPZ6 1657 aa28.29■■■□□ 2.12
CBWD3-202ENST00000377342 PHACTR3Q96KR7 559 aa28.28■■■□□ 2.12
CBWD3-202ENST00000377342 TCP11L2Q8N4U5 519 aa28.27■■■□□ 2.12
CBWD3-202ENST00000377342 PLEKHG2Q9H7P9 1386 aa28.27■■■□□ 2.12
CBWD3-202ENST00000377342 RUNDC1Q96C34 613 aa28.26■■■□□ 2.12
CBWD3-202ENST00000377342 TRPC5Q9UL62 973 aaPredicted RBP28.26■■■□□ 2.11
CBWD3-202ENST00000377342 CCDC9Q9Y3X0 531 aaKnown RBP28.26■■■□□ 2.11
CBWD3-202ENST00000377342 RAPGEF4Q8WZA2 1011 aa28.24■■■□□ 2.11
CBWD3-202ENST00000377342 THRAP3Q9Y2W1 955 aaKnown RBP28.24■■■□□ 2.11
CBWD3-202ENST00000377342 IL2RBP14784 551 aa28.23■■■□□ 2.11
CBWD3-202ENST00000377342 RGS17Q9UGC6 210 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms