RNA–Protein interactions for RNA: ENST00000377122.8

NEBL-202, Transcript of nebulette, humanhuman

TSL 1 (best) BASIC

Gene NEBL, Length 9,216 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEBL-202ENST00000377122 TXLNBQ8N3L3 684 aa3.39□□□□□ -1.87
NEBL-202ENST00000377122 SMARCC2Q8TAQ2 1214 aa3.39□□□□□ -1.87
NEBL-202ENST00000377122 TRIM6-TRIM34B2RNG4 842 aa3.39□□□□□ -1.87
NEBL-202ENST00000377122 ANKRD20A12PQ8NF67 263 aa3.39□□□□□ -1.87
NEBL-202ENST00000377122 TRIM34Q9BYJ4 488 aa3.39□□□□□ -1.87
NEBL-202ENST00000377122 HSPA5P11021 654 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 SP100P23497 879 aaPredicted RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 GJC2Q5T442 439 aaPredicted RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 THOC7Q6I9Y2 204 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 RPUSD2Q8IZ73 545 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 BICDL2A1A5D9 508 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 HIP1RO75146 1068 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 CEBPZQ03701 1054 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 NBPF1Q3BBV0 1214 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 NAA16Q6N069 864 aaPredicted RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 NUTM1Q86Y26 1132 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 GBP3Q9H0R5 595 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 OPA1O60313 960 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 SERPINI2O75830 405 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 EIF5P55010 431 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 KIF22Q14807 665 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 TRIM60Q495X7 471 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 ARMC9Q7Z3E5 817 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 PPP1R14DQ9NXH3 145 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 APBB1O00213 710 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 NOP56O00567 594 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 IPO4Q8TEX9 1081 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 CLIP2Q9UDT6 1046 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 DAAM1Q9Y4D1 1078 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 THEGQ9P2T0 379 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 HOOK1Q9UJC3 728 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 GTF2A1P52655 376 aaPredicted RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 IL1RL1Q01638 556 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 KIF5AQ12840 1032 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 SETDB1Q15047 1291 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 PRR16Q569H4 304 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 EP400NLQ6ZTU2 488 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 FNBP4Q8N3X1 1017 aaPredicted RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 TRIM11Q96F44 468 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 TRIM5Q9C035 493 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 VCX3BQ9H321 246 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 CCDC160A6NGH7 325 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 ERLIN1O75477 346 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 SPARCP09486 303 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 LRRFIP1Q32MZ4 808 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 NBPF20Q3BBV1 942 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 CCDC92Q53HC0 331 aaPredicted RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 NOL10Q9BSC4 688 aaKnown RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 KIF5CO60282 957 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 SPRYD3Q8NCJ5 442 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 NUP133Q8WUM0 1156 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 ATP2A3Q93084 1043 aa3.38□□□□□ -1.87
NEBL-202ENST00000377122 FBXO2Q9UK22 296 aaPredicted RBP3.38□□□□□ -1.87
NEBL-202ENST00000377122 DDX11L8A8MPP1 907 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 HNRNPCP07910 306 aaKnown RBP eCLIP3.37□□□□□ -1.87
NEBL-202ENST00000377122 CCND1P24385 295 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 MRPS35P82673 323 aaKnown RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 NBPF9Q3BBW0 867 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 CCDC38Q502W7 563 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 KLHL10Q6JEL2 608 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 ZNF513Q8N8E2 541 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 RUFY2Q8WXA3 655 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 BCL11BQ9C0K0 894 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 ABCC9O60706 1549 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 ATP6V1AP38606 617 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 RAP1GDS1P52306 607 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 TEX9Q8N6V9 391 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 STMN4Q9H169 189 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 DIABLOQ9NR28 239 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 SUPT16HQ9Y5B9 1047 aaKnown RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 MSR1P21757 451 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 RUFY3Q7L099 469 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 LSM14BQ9BX40 385 aaKnown RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 MED4Q9NPJ6 270 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 CWC25Q9NXE8 425 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 BASP1P80723 227 aaKnown RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 FAPQ12884 760 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 MAP7Q14244 749 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 PHLDB3Q6NSJ2 640 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 ANKRD35Q8N283 1001 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 FBXO41Q8TF61 875 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 LUC7LQ9NQ29 371 aaKnown RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 TMEM232C9JQI7 657 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 PPP1R12BO60237 982 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 ZFYP08048 801 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 SDCCAG8Q86SQ7 713 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 PPARGC1BQ86YN6 1023 aaKnown RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 MIER1Q8N108 512 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 ERMNQ8TAM6 284 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 UBAC1Q9BSL1 405 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 MMRN2Q9H8L6 949 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 HNRNPCL1O60812 293 aaKnown RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 PPFIA2O75334 1257 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 PDE1CQ14123 709 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 ZHX3Q9H4I2 956 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 ZMYND8Q9ULU4 1186 aaPredicted RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 LUC7L2Q9Y383 392 aaKnown RBP3.37□□□□□ -1.87
NEBL-202ENST00000377122 IKBKGQ9Y6K9 419 aa3.37□□□□□ -1.87
NEBL-202ENST00000377122 CCDC85CA6NKD9 419 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms