RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 RGPD5Q99666 1765 aa27.78■■■□□ 2.04
NELFE-202ENST00000375429 AXIN2Q9Y2T1 843 aa27.78■■■□□ 2.04
NELFE-202ENST00000375429 FLT4P35916 1363 aa27.78■■■□□ 2.04
NELFE-202ENST00000375429 LRP6O75581 1613 aa27.78■■■□□ 2.04
NELFE-202ENST00000375429 CDK12Q9NYV4 1490 aaPredicted RBP27.77■■■□□ 2.04
NELFE-202ENST00000375429 RTL1A6NKG5 1358 aa27.77■■■□□ 2.04
NELFE-202ENST00000375429 INSRP06213 1382 aa27.76■■■□□ 2.03
NELFE-202ENST00000375429 CCER2I3L3R5 266 aa27.76■■■□□ 2.03
NELFE-202ENST00000375429 CFAP53Q96M91 514 aa27.75■■■□□ 2.03
NELFE-202ENST00000375429 LMO7Q8WWI1 1683 aa27.74■■■□□ 2.03
NELFE-202ENST00000375429 MRS2Q9HD23 443 aa27.73■■■□□ 2.03
NELFE-202ENST00000375429 COL3A1P02461 1466 aaPredicted RBP27.73■■■□□ 2.03
NELFE-202ENST00000375429 COL14A1Q05707 1796 aaKnown RBP27.73■■■□□ 2.03
NELFE-202ENST00000375429 CAMTA1Q9Y6Y1 1673 aa27.72■■■□□ 2.03
NELFE-202ENST00000375429 ABCC6O95255 1503 aa27.72■■■□□ 2.03
NELFE-202ENST00000375429 BLMP54132 1417 aaPredicted RBP27.7■■■□□ 2.03
NELFE-202ENST00000375429 DIAPH1O60610 1272 aaKnown RBP27.69■■■□□ 2.02
NELFE-202ENST00000375429 EIF4A2Q14240 407 aaKnown RBP27.69■■■□□ 2.02
NELFE-202ENST00000375429 LTV1Q96GA3 475 aaPredicted RBP27.69■■■□□ 2.02
NELFE-202ENST00000375429 IL13P35225 146 aa27.69■■■□□ 2.02
NELFE-202ENST00000375429 ILDR1Q86SU0 546 aaPredicted RBP27.69■■■□□ 2.02
NELFE-202ENST00000375429 C8orf37Q96NL8 207 aa27.68■■■□□ 2.02
NELFE-202ENST00000375429 BTG4Q9NY30 223 aa27.68■■■□□ 2.02
NELFE-202ENST00000375429 ANKRD24Q8TF21 1146 aa27.67■■■□□ 2.02
NELFE-202ENST00000375429 PLCH1Q4KWH8 1693 aa27.67■■■□□ 2.02
NELFE-202ENST00000375429 MEX3CQ5U5Q3 659 aaKnown RBP27.66■■■□□ 2.02
NELFE-202ENST00000375429 NGLY1Q96IV0 654 aa27.66■■■□□ 2.02
NELFE-202ENST00000375429 ERBB3P21860 1342 aa27.65■■■□□ 2.02
NELFE-202ENST00000375429 COL5A2P05997 1499 aaPredicted RBP27.64■■■□□ 2.02
NELFE-202ENST00000375429 SLIT2O94813 1529 aa27.63■■■□□ 2.01
NELFE-202ENST00000375429 PNISRQ8TF01 805 aaKnown RBP27.63■■■□□ 2.01
NELFE-202ENST00000375429 RGPD2P0DJD1 1756 aa27.63■■■□□ 2.01
NELFE-202ENST00000375429 EVA1CP58658 441 aa27.62■■■□□ 2.01
NELFE-202ENST00000375429 STRN4Q9NRL3 753 aa27.62■■■□□ 2.01
NELFE-202ENST00000375429 NWD2Q9ULI1 1742 aa27.61■■■□□ 2.01
NELFE-202ENST00000375429 FNBP4Q8N3X1 1017 aaPredicted RBP27.61■■■□□ 2.01
NELFE-202ENST00000375429 NUDCQ9Y266 331 aa27.61■■■□□ 2.01
NELFE-202ENST00000375429 U2SURPO15042 1029 aaKnown RBP27.6■■■□□ 2.01
NELFE-202ENST00000375429 EYA1Q99502 592 aa27.6■■■□□ 2.01
NELFE-202ENST00000375429 NRAPQ86VF7 1730 aa27.59■■■□□ 2.01
NELFE-202ENST00000375429 CSB-PGBD3P0DP91 1061 aa27.59■■■□□ 2.01
NELFE-202ENST00000375429 WDR17Q8IZU2 1322 aa27.58■■■□□ 2.01
NELFE-202ENST00000375429 NBPF6Q5VWK0 638 aa27.58■■■□□ 2.01
NELFE-202ENST00000375429 LARP1Q6PKG0 1096 aaKnown RBP27.58■■■□□ 2.01
NELFE-202ENST00000375429 NBPF4Q96M43 638 aa27.58■■■□□ 2.01
NELFE-202ENST00000375429 RGPD1P0DJD0 1748 aa27.58■■■□□ 2.01
NELFE-202ENST00000375429 BCL9LQ86UU0 1499 aa27.57■■■□□ 2
NELFE-202ENST00000375429 WDR43Q15061 677 aaKnown RBP eCLIP27.56■■■□□ 2
NELFE-202ENST00000375429 U2AF1L5P0DN76 240 aaPredicted RBP27.56■■■□□ 2
NELFE-202ENST00000375429 U2AF1Q01081 240 aaKnown RBP eCLIP27.56■■■□□ 2
NELFE-202ENST00000375429 UNC5CLQ8IV45 518 aa27.56■■■□□ 2
NELFE-202ENST00000375429 FAM9BQ8IZU0 186 aa27.56■■■□□ 2
NELFE-202ENST00000375429 NLRP2Q9NX02 1062 aa27.56■■■□□ 2
NELFE-202ENST00000375429 ADAMTS8Q9UP79 889 aa27.56■■■□□ 2
NELFE-202ENST00000375429 AFF2P51816 1311 aa27.55■■■□□ 2
NELFE-202ENST00000375429 IGSF1Q8N6C5 1336 aa27.55■■■□□ 2
NELFE-202ENST00000375429 FAM208AQ9UK61 1670 aaKnown RBP27.55■■■□□ 2
NELFE-202ENST00000375429 TOM1L2Q6ZVM7 507 aa27.55■■■□□ 2
NELFE-202ENST00000375429 USP21Q9UK80 565 aa27.55■■■□□ 2
NELFE-202ENST00000375429 USHBP1Q8N6Y0 703 aa27.53■■■□□ 2
NELFE-202ENST00000375429 HMOX1P09601 288 aa27.52■■■□□ 2
NELFE-202ENST00000375429 SULT6B1Q6IMI4 303 aa27.52■■■□□ 2
NELFE-202ENST00000375429 AEBP1Q8IUX7 1158 aa27.52■■■□□ 2
NELFE-202ENST00000375429 CRB1P82279 1406 aa27.51■■□□□ 1.99
NELFE-202ENST00000375429 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.5■■□□□ 1.99
NELFE-202ENST00000375429 CARD10Q9BWT7 1032 aa27.5■■□□□ 1.99
NELFE-202ENST00000375429 NCAPD2Q15021 1401 aa27.49■■□□□ 1.99
NELFE-202ENST00000375429 FCHSD2O94868 740 aa27.47■■□□□ 1.99
NELFE-202ENST00000375429 VPS72Q15906 364 aa27.47■■□□□ 1.99
NELFE-202ENST00000375429 RSPH6AQ9H0K4 717 aa27.47■■□□□ 1.99
NELFE-202ENST00000375429 USP35Q9P2H5 1018 aa27.47■■□□□ 1.99
NELFE-202ENST00000375429 KDRP35968 1356 aa27.47■■□□□ 1.99
NELFE-202ENST00000375429 SPATA31A1Q5TZJ5 1347 aa27.45■■□□□ 1.99
NELFE-202ENST00000375429 SPATA31A5Q5VU36 1347 aa27.45■■□□□ 1.99
NELFE-202ENST00000375429 SPATA31A7Q8IWB4 1347 aa27.45■■□□□ 1.99
NELFE-202ENST00000375429 CCDC9Q9Y3X0 531 aaKnown RBP27.45■■□□□ 1.99
NELFE-202ENST00000375429 PRKAR2BP31323 418 aa27.43■■□□□ 1.98
NELFE-202ENST00000375429 PLEKHF1Q96S99 279 aa27.43■■□□□ 1.98
NELFE-202ENST00000375429 CCDC146Q8IYE0 955 aa27.42■■□□□ 1.98
NELFE-202ENST00000375429 TRPC5Q9UL62 973 aaPredicted RBP27.42■■□□□ 1.98
NELFE-202ENST00000375429 ATRNO75882 1429 aa27.41■■□□□ 1.98
NELFE-202ENST00000375429 TCP11L2Q8N4U5 519 aa27.4■■□□□ 1.98
NELFE-202ENST00000375429 QTRT2Q9H974 415 aaKnown RBP27.4■■□□□ 1.98
NELFE-202ENST00000375429 ZNF772Q68DY9 489 aaPredicted RBP27.39■■□□□ 1.98
NELFE-202ENST00000375429 PNNQ9H307 717 aaKnown RBP27.39■■□□□ 1.98
NELFE-202ENST00000375429 PHACTR3Q96KR7 559 aa27.39■■□□□ 1.97
NELFE-202ENST00000375429 THRAP3Q9Y2W1 955 aaKnown RBP27.39■■□□□ 1.97
NELFE-202ENST00000375429 RAPGEF4Q8WZA2 1011 aa27.38■■□□□ 1.97
NELFE-202ENST00000375429 RUNDC1Q96C34 613 aa27.38■■□□□ 1.97
NELFE-202ENST00000375429 GJD4Q96KN9 370 aaPredicted RBP27.38■■□□□ 1.97
NELFE-202ENST00000375429 RGS17Q9UGC6 210 aaPredicted RBP27.38■■□□□ 1.97
NELFE-202ENST00000375429 MEGF6O75095 1541 aa27.36■■□□□ 1.97
NELFE-202ENST00000375429 IL2RBP14784 551 aa27.36■■□□□ 1.97
NELFE-202ENST00000375429 TATP17735 454 aaPredicted RBP27.35■■□□□ 1.97
NELFE-202ENST00000375429 GLI3P10071 1580 aa27.35■■□□□ 1.97
NELFE-202ENST00000375429 BARGINQ6ZT62 677 aa27.35■■□□□ 1.97
NELFE-202ENST00000375429 WNK3Q9BYP7 1800 aa27.34■■□□□ 1.97
NELFE-202ENST00000375429 DISP2A7MBM2 1401 aa27.34■■□□□ 1.97
NELFE-202ENST00000375429 PHF23Q9BUL5 403 aaPredicted RBP27.32■■□□□ 1.96
NELFE-202ENST00000375429 MAPK8IP3Q9UPT6 1336 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms