RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 TRAF1Q13077 416 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 LRRC23Q53EV4 343 aaPredicted RBP10.32□□□□□ -0.76
ABCA1-202ENST00000374736 TTC19Q6DKK2 380 aaPredicted RBP10.32□□□□□ -0.76
ABCA1-202ENST00000374736 CEP57Q86XR8 500 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 TTC14Q96N46 770 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 NEMFO60524 1076 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 HDGFL1Q5TGJ6 251 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 GTF2E1P29083 439 aaPredicted RBP10.32□□□□□ -0.76
ABCA1-202ENST00000374736 INF2Q27J81 1249 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 C10orf67Q8IYJ2 551 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 CCDC73Q6ZRK6 1079 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 CFAP45Q9UL16 551 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 PAIP2BQ9ULR5 123 aaKnown RBP10.31□□□□□ -0.76
ABCA1-202ENST00000374736 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
ABCA1-202ENST00000374736 ABCF2Q9UG63 623 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 EIF5P55010 431 aaKnown RBP10.31□□□□□ -0.76
ABCA1-202ENST00000374736 MAP7Q14244 749 aa10.31□□□□□ -0.76
ABCA1-202ENST00000374736 KDM4AO75164 1064 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 ARHGAP25P42331 645 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 NEDD9Q14511 834 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 TPD52L1Q16890 204 aaPredicted RBP10.3□□□□□ -0.76
ABCA1-202ENST00000374736 VEZTQ9HBM0 779 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 NAA25Q14CX7 972 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 PPP1R9BQ96SB3 815 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 NUDCQ9Y266 331 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 SPTY2D1Q68D10 685 aaPredicted RBP10.3□□□□□ -0.76
ABCA1-202ENST00000374736 CCAR2Q8N163 923 aaKnown RBP10.3□□□□□ -0.76
ABCA1-202ENST00000374736 KIF18AQ8NI77 898 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 UBXN4Q92575 508 aa10.3□□□□□ -0.76
ABCA1-202ENST00000374736 FAM76AQ8TAV0 307 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 BIRC2Q13490 618 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 BECN2A8MW95 431 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 NBPF8Q3BBV2 869 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 B4GALNT4Q76KP1 1039 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 VCXQ9H320 206 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 LUC7LQ9NQ29 371 aaKnown RBP10.29□□□□□ -0.76
ABCA1-202ENST00000374736 SLC8A1P32418 973 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 SEPT10Q9P0V9 454 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 DAAM2Q86T65 1068 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 CLNS1AP54105 237 aaKnown RBP10.29□□□□□ -0.76
ABCA1-202ENST00000374736 EBAG9O00559 213 aa10.29□□□□□ -0.76
ABCA1-202ENST00000374736 CCDC40Q4G0X9 1142 aa10.28□□□□□ -0.76
ABCA1-202ENST00000374736 SMARCC1Q92922 1105 aaPredicted RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 RWDD1Q9H446 243 aaPredicted RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 LUC7L2Q9Y383 392 aaKnown RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 EIF4G2P78344 907 aaKnown RBP eCLIP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 EXOC1Q9NV70 894 aa10.28□□□□□ -0.76
ABCA1-202ENST00000374736 SDCCAG8Q86SQ7 713 aaPredicted RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 TRIM6Q9C030 488 aaPredicted RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 ISM2Q6H9L7 571 aa10.28□□□□□ -0.76
ABCA1-202ENST00000374736 SRRTQ9BXP5 876 aaKnown RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 DDX46Q7L014 1031 aaKnown RBP10.28□□□□□ -0.76
ABCA1-202ENST00000374736 ARMC9Q7Z3E5 817 aa10.27□□□□□ -0.76
ABCA1-202ENST00000374736 ERC2O15083 957 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■■□□□ 11.8
ABCA1-202ENST00000374736 MSH5O43196 834 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 PHLDB2Q86SQ0 1253 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 TSPY26PQ9H489 355 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 JRKLQ9Y4A0 524 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
ABCA1-202ENST00000374736 GJC2Q5T442 439 aaPredicted RBP10.27□□□□□ -0.77
ABCA1-202ENST00000374736 ACRBPQ8NEB7 543 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 DRC1Q96MC2 740 aa10.27□□□□□ -0.77
ABCA1-202ENST00000374736 BUB1BO60566 1050 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 FAM160A1Q05DH4 1040 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 MAP7D1Q3KQU3 841 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 H0YC42 278 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 DHX16O60231 1041 aaKnown RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 FRAT2O75474 233 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 TPD52P55327 224 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 MAP3K7CLP57077 242 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 NEUROD2Q15784 382 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 LMNTD2Q8IXW0 634 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 ANKS4BQ8N8V4 417 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 MORC4Q8TE76 937 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 TUBA8Q9NY65 449 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 ZNF397Q8NF99 534 aaPredicted RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 RABGAP1Q9Y3P9 1069 aa10.26□□□□□ -0.77
ABCA1-202ENST00000374736 DDX27Q96GQ7 796 aaKnown RBP10.26□□□□□ -0.77
ABCA1-202ENST00000374736 SPECC1LQ69YQ0 1117 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 CAVIN2O95810 425 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 IRAK4Q9NWZ3 460 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 DONSONQ9NYP3 566 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 SMC3Q9UQE7 1217 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 UTP6Q9NYH9 597 aaKnown RBP10.25□□□□□ -0.77
ABCA1-202ENST00000374736 MYO15BQ96JP2 1530 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 CGNL1Q0VF96 1302 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 ZNF500O60304 480 aaPredicted RBP10.25□□□□□ -0.77
ABCA1-202ENST00000374736 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.25□□□□□ -0.772e-6■□□□□ 8.3
ABCA1-202ENST00000374736 MACROD2A1Z1Q3 448 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 CCDC80Q76M96 950 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 RCAN3Q9UKA8 241 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 RMI1Q9H9A7 625 aa10.25□□□□□ -0.77
ABCA1-202ENST00000374736 MTUS2Q5JR59 1369 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 MSL1Q68DK7 614 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 VCX3BQ9H321 246 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 VCX3AQ9NNX9 186 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 GMNNO75496 209 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 CDKL5O76039 1030 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 USP33Q8TEY7 942 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms