RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 CCER2I3L3R5 266 aa23.69■■□□□ 1.38
VPS37B-202ENST00000371248 HSP90AB2PQ58FF8 381 aa23.69■■□□□ 1.38
VPS37B-202ENST00000371248 IP6K1Q92551 441 aa23.69■■□□□ 1.38
VPS37B-202ENST00000371248 CFAP53Q96M91 514 aa23.69■■□□□ 1.38
VPS37B-202ENST00000371248 COL18A1P39060 1754 aa23.68■■□□□ 1.38
VPS37B-202ENST00000371248 CDK12Q9NYV4 1490 aaPredicted RBP23.68■■□□□ 1.38
VPS37B-202ENST00000371248 MRS2Q9HD23 443 aa23.68■■□□□ 1.38
VPS37B-202ENST00000371248 RTL1A6NKG5 1358 aa23.68■■□□□ 1.38
VPS37B-202ENST00000371248 FAM83GA6ND36 823 aa23.68■■□□□ 1.38
VPS37B-202ENST00000371248 AXIN2Q9Y2T1 843 aa23.67■■□□□ 1.38
VPS37B-202ENST00000371248 LRP6O75581 1613 aa23.65■■□□□ 1.38
VPS37B-202ENST00000371248 INSRP06213 1382 aa23.65■■□□□ 1.38
VPS37B-202ENST00000371248 COL14A1Q05707 1796 aaKnown RBP23.64■■□□□ 1.37
VPS37B-202ENST00000371248 COL3A1P02461 1466 aaPredicted RBP23.63■■□□□ 1.37
VPS37B-202ENST00000371248 DIAPH1O60610 1272 aaKnown RBP23.63■■□□□ 1.37
VPS37B-202ENST00000371248 LTV1Q96GA3 475 aaPredicted RBP23.63■■□□□ 1.37
VPS37B-202ENST00000371248 LMO7Q8WWI1 1683 aa23.62■■□□□ 1.37
VPS37B-202ENST00000371248 ABCC6O95255 1503 aa23.62■■□□□ 1.37
VPS37B-202ENST00000371248 BLMP54132 1417 aaPredicted RBP23.62■■□□□ 1.37
VPS37B-202ENST00000371248 CAMTA1Q9Y6Y1 1673 aa23.61■■□□□ 1.37
VPS37B-202ENST00000371248 EIF4A2Q14240 407 aaKnown RBP23.61■■□□□ 1.37
VPS37B-202ENST00000371248 PLCH1Q4KWH8 1693 aa23.6■■□□□ 1.37
VPS37B-202ENST00000371248 MEX3CQ5U5Q3 659 aaKnown RBP23.6■■□□□ 1.37
VPS37B-202ENST00000371248 C8orf37Q96NL8 207 aa23.6■■□□□ 1.37
VPS37B-202ENST00000371248 BTG4Q9NY30 223 aa23.6■■□□□ 1.37
VPS37B-202ENST00000371248 IL13P35225 146 aa23.59■■□□□ 1.37
VPS37B-202ENST00000371248 ANKRD24Q8TF21 1146 aa23.59■■□□□ 1.37
VPS37B-202ENST00000371248 NGLY1Q96IV0 654 aa23.58■■□□□ 1.36
VPS37B-202ENST00000371248 NUDCQ9Y266 331 aa23.57■■□□□ 1.36
VPS37B-202ENST00000371248 RGPD2P0DJD1 1756 aa23.56■■□□□ 1.36
VPS37B-202ENST00000371248 ERBB3P21860 1342 aa23.56■■□□□ 1.36
VPS37B-202ENST00000371248 U2SURPO15042 1029 aaKnown RBP23.56■■□□□ 1.36
VPS37B-202ENST00000371248 PNISRQ8TF01 805 aaKnown RBP23.56■■□□□ 1.36
VPS37B-202ENST00000371248 EVA1CP58658 441 aa23.55■■□□□ 1.36
VPS37B-202ENST00000371248 STRN4Q9NRL3 753 aa23.55■■□□□ 1.36
VPS37B-202ENST00000371248 CSB-PGBD3P0DP91 1061 aa23.55■■□□□ 1.36
VPS37B-202ENST00000371248 COL5A2P05997 1499 aaPredicted RBP23.55■■□□□ 1.36
VPS37B-202ENST00000371248 WDR43Q15061 677 aaKnown RBP eCLIP23.54■■□□□ 1.36
VPS37B-202ENST00000371248 ILDR1Q86SU0 546 aaPredicted RBP23.54■■□□□ 1.36
VPS37B-202ENST00000371248 NWD2Q9ULI1 1742 aa23.54■■□□□ 1.36
VPS37B-202ENST00000371248 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
VPS37B-202ENST00000371248 SLIT2O94813 1529 aa23.53■■□□□ 1.36
VPS37B-202ENST00000371248 EYA1Q99502 592 aa23.52■■□□□ 1.36
VPS37B-202ENST00000371248 U2AF1L5P0DN76 240 aaPredicted RBP23.52■■□□□ 1.35
VPS37B-202ENST00000371248 U2AF1Q01081 240 aaKnown RBP eCLIP23.52■■□□□ 1.35
VPS37B-202ENST00000371248 RGPD1P0DJD0 1748 aa23.51■■□□□ 1.35
VPS37B-202ENST00000371248 NRAPQ86VF7 1730 aa23.51■■□□□ 1.35
VPS37B-202ENST00000371248 NBPF6Q5VWK0 638 aa23.51■■□□□ 1.35
VPS37B-202ENST00000371248 NBPF4Q96M43 638 aa23.51■■□□□ 1.35
VPS37B-202ENST00000371248 WDR17Q8IZU2 1322 aa23.51■■□□□ 1.35
VPS37B-202ENST00000371248 FAM208AQ9UK61 1670 aaKnown RBP23.51■■□□□ 1.35
VPS37B-202ENST00000371248 FNBP4Q8N3X1 1017 aaPredicted RBP23.5■■□□□ 1.35
VPS37B-202ENST00000371248 NLRP2Q9NX02 1062 aa23.5■■□□□ 1.35
VPS37B-202ENST00000371248 ADAMTS8Q9UP79 889 aa23.5■■□□□ 1.35
VPS37B-202ENST00000371248 LARP1Q6PKG0 1096 aaKnown RBP23.5■■□□□ 1.35
VPS37B-202ENST00000371248 TOM1L2Q6ZVM7 507 aa23.49■■□□□ 1.35
VPS37B-202ENST00000371248 USHBP1Q8N6Y0 703 aa23.48■■□□□ 1.35
VPS37B-202ENST00000371248 IGSF1Q8N6C5 1336 aa23.48■■□□□ 1.35
VPS37B-202ENST00000371248 HMOX1P09601 288 aa23.48■■□□□ 1.35
VPS37B-202ENST00000371248 UNC5CLQ8IV45 518 aa23.48■■□□□ 1.35
VPS37B-202ENST00000371248 AFF2P51816 1311 aa23.47■■□□□ 1.35
VPS37B-202ENST00000371248 USP21Q9UK80 565 aa23.47■■□□□ 1.35
VPS37B-202ENST00000371248 BCL9LQ86UU0 1499 aa23.47■■□□□ 1.35
VPS37B-202ENST00000371248 SULT6B1Q6IMI4 303 aa23.47■■□□□ 1.35
VPS37B-202ENST00000371248 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.35
VPS37B-202ENST00000371248 CRB1P82279 1406 aa23.45■■□□□ 1.34
VPS37B-202ENST00000371248 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.44■■□□□ 1.34
VPS37B-202ENST00000371248 USP35Q9P2H5 1018 aa23.44■■□□□ 1.34
VPS37B-202ENST00000371248 CARD10Q9BWT7 1032 aa23.43■■□□□ 1.34
VPS37B-202ENST00000371248 FCHSD2O94868 740 aa23.42■■□□□ 1.34
VPS37B-202ENST00000371248 CCDC9Q9Y3X0 531 aaKnown RBP23.42■■□□□ 1.34
VPS37B-202ENST00000371248 KDRP35968 1356 aa23.41■■□□□ 1.34
VPS37B-202ENST00000371248 RSPH6AQ9H0K4 717 aa23.41■■□□□ 1.34
VPS37B-202ENST00000371248 NCAPD2Q15021 1401 aa23.4■■□□□ 1.34
VPS37B-202ENST00000371248 PRKAR2BP31323 418 aa23.4■■□□□ 1.34
VPS37B-202ENST00000371248 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
VPS37B-202ENST00000371248 VPS72Q15906 364 aa23.39■■□□□ 1.34
VPS37B-202ENST00000371248 PNNQ9H307 717 aaKnown RBP23.39■■□□□ 1.33
VPS37B-202ENST00000371248 SPATA31A1Q5TZJ5 1347 aa23.38■■□□□ 1.33
VPS37B-202ENST00000371248 SPATA31A5Q5VU36 1347 aa23.38■■□□□ 1.33
VPS37B-202ENST00000371248 SPATA31A7Q8IWB4 1347 aa23.38■■□□□ 1.33
VPS37B-202ENST00000371248 PLEKHF1Q96S99 279 aa23.37■■□□□ 1.33
VPS37B-202ENST00000371248 TCP11L2Q8N4U5 519 aa23.36■■□□□ 1.33
VPS37B-202ENST00000371248 RAPGEF4Q8WZA2 1011 aa23.36■■□□□ 1.33
VPS37B-202ENST00000371248 RUNDC1Q96C34 613 aa23.36■■□□□ 1.33
VPS37B-202ENST00000371248 TRPC5Q9UL62 973 aaPredicted RBP23.36■■□□□ 1.33
VPS37B-202ENST00000371248 QTRT2Q9H974 415 aaKnown RBP23.35■■□□□ 1.33
VPS37B-202ENST00000371248 PHACTR3Q96KR7 559 aa23.34■■□□□ 1.33
VPS37B-202ENST00000371248 NEFMP07197 916 aa23.34■■□□□ 1.33
VPS37B-202ENST00000371248 ZNF772Q68DY9 489 aaPredicted RBP23.34■■□□□ 1.33
VPS37B-202ENST00000371248 ATRNO75882 1429 aa23.33■■□□□ 1.33
VPS37B-202ENST00000371248 MAPK8IP3Q9UPT6 1336 aa23.33■■□□□ 1.33
VPS37B-202ENST00000371248 TATP17735 454 aaPredicted RBP23.33■■□□□ 1.33
VPS37B-202ENST00000371248 THRAP3Q9Y2W1 955 aaKnown RBP23.33■■□□□ 1.33
VPS37B-202ENST00000371248 IL2RBP14784 551 aa23.32■■□□□ 1.32
VPS37B-202ENST00000371248 MEGF6O75095 1541 aa23.32■■□□□ 1.32
VPS37B-202ENST00000371248 SENP3-EIF4A1A0A087X0R7 540 aa23.32■■□□□ 1.32
VPS37B-202ENST00000371248 GJD4Q96KN9 370 aaPredicted RBP23.32■■□□□ 1.32
VPS37B-202ENST00000371248 WNK3Q9BYP7 1800 aa23.32■■□□□ 1.32
VPS37B-202ENST00000371248 PARP4Q9UKK3 1724 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms