RNA–Protein interactions for RNA: ENST00000367067.8

CD55-205, Transcript of CD55 molecule (Cromer blood group), human

APPRIS ALT2 TSL 5 BASIC

Gene CD55, Length 1,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-205	ENST00000367067	EIF4A2	Q14240	407 aa	Known RBP	28.01	■■■□□ 2.07
CD55-205	ENST00000367067	ARHGEF25	Q86VW2	580 aa		27.99	■■■□□ 2.07
CD55-205	ENST00000367067	RUNDC1	Q96C34	613 aa		27.99	■■■□□ 2.07
CD55-205	ENST00000367067	CABLES1	Q8TDN4	633 aa		27.98	■■■□□ 2.07
CD55-205	ENST00000367067	IP6K1	Q92551	441 aa		27.97	■■■□□ 2.07
CD55-205	ENST00000367067	RGPD1	P0DJD0	1748 aa		27.97	■■■□□ 2.07
CD55-205	ENST00000367067	PHLPP1	O60346	1717 aa		27.96	■■■□□ 2.07
CD55-205	ENST00000367067	ZBTB7C	A1YPR0	619 aa		27.95	■■■□□ 2.07
CD55-205	ENST00000367067	APAF1	O14727	1248 aa		27.95	■■■□□ 2.07
CD55-205	ENST00000367067	FCHSD2	O94868	740 aa		27.95	■■■□□ 2.07
CD55-205	ENST00000367067	PNN	Q9H307	717 aa	Known RBP	27.95	■■■□□ 2.07
CD55-205	ENST00000367067	ABCA3	Q99758	1704 aa		27.95	■■■□□ 2.07
CD55-205	ENST00000367067	LRRC59	Q96AG4	307 aa	Known RBP	27.95	■■■□□ 2.06
CD55-205	ENST00000367067	SALL2	Q9Y467	1007 aa	Predicted RBP	27.95	■■■□□ 2.06
CD55-205	ENST00000367067	ZC3H6	P61129	1189 aa	Known RBP	27.94	■■■□□ 2.06
CD55-205	ENST00000367067	PLEKHF1	Q96S99	279 aa		27.92	■■■□□ 2.06
CD55-205	ENST00000367067	COL16A1	Q07092	1604 aa	Predicted RBP	27.92	■■■□□ 2.06
CD55-205	ENST00000367067	HMOX1	P09601	288 aa		27.92	■■■□□ 2.06
CD55-205	ENST00000367067	RSPH6A	Q9H0K4	717 aa		27.92	■■■□□ 2.06
CD55-205	ENST00000367067	GTF3C3	Q9Y5Q9	886 aa		27.92	■■■□□ 2.06
CD55-205	ENST00000367067	RGPD5	Q99666	1765 aa		27.91	■■■□□ 2.06
CD55-205	ENST00000367067	TCP11L2	Q8N4U5	519 aa		27.9	■■■□□ 2.06
CD55-205	ENST00000367067	NGEF	Q8N5V2	710 aa		27.9	■■■□□ 2.06
CD55-205	ENST00000367067	CPD	O75976	1380 aa		27.89	■■■□□ 2.06
CD55-205	ENST00000367067	MAPK8IP3	Q9UPT6	1336 aa		27.89	■■■□□ 2.05
CD55-205	ENST00000367067	PRKAR2B	P31323	418 aa		27.88	■■■□□ 2.05
CD55-205	ENST00000367067	COL18A1	P39060	1754 aa		27.88	■■■□□ 2.05
CD55-205	ENST00000367067	HAP1	P54257	671 aa	Predicted RBP	27.87	■■■□□ 2.05
CD55-205	ENST00000367067	LTV1	Q96GA3	475 aa	Predicted RBP	27.87	■■■□□ 2.05
CD55-205	ENST00000367067	ABCC6	O95255	1503 aa		27.87	■■■□□ 2.05
CD55-205	ENST00000367067	COL22A1	Q8NFW1	1626 aa	Predicted RBP	27.86	■■■□□ 2.05
CD55-205	ENST00000367067	SULT6B1	Q6IMI4	303 aa		27.86	■■■□□ 2.05
CD55-205	ENST00000367067	EYA1	Q99502	592 aa		27.86	■■■□□ 2.05
CD55-205	ENST00000367067	IGSF1	Q8N6C5	1336 aa		27.86	■■■□□ 2.05
CD55-205	ENST00000367067	KIAA0232	Q92628	1395 aa		27.86	■■■□□ 2.05
CD55-205	ENST00000367067	NEFM	P07197	916 aa		27.85	■■■□□ 2.05
CD55-205	ENST00000367067	RGPD2	P0DJD1	1756 aa		27.84	■■■□□ 2.05
CD55-205	ENST00000367067	AEBP1	Q8IUX7	1158 aa		27.84	■■■□□ 2.05
CD55-205	ENST00000367067	AXIN2	Q9Y2T1	843 aa		27.84	■■■□□ 2.05
CD55-205	ENST00000367067	KDR	P35968	1356 aa		27.82	■■■□□ 2.04
CD55-205	ENST00000367067	RRP7A	Q9Y3A4	280 aa	Known RBP	27.82	■■■□□ 2.04
CD55-205	ENST00000367067	PDE3B	Q13370	1112 aa		27.81	■■■□□ 2.04
CD55-205	ENST00000367067	NEUROD2	Q15784	382 aa		27.81	■■■□□ 2.04
CD55-205	ENST00000367067	ZNF521	Q96K83	1311 aa		27.81	■■■□□ 2.04
CD55-205	ENST00000367067	NCBP3	Q53F19	620 aa	Known RBP	27.81	■■■□□ 2.04
CD55-205	ENST00000367067	CHRNA2	Q15822	529 aa		27.8	■■■□□ 2.04
CD55-205	ENST00000367067	ANKRD24	Q8TF21	1146 aa		27.8	■■■□□ 2.04
CD55-205	ENST00000367067	PHACTR3	Q96KR7	559 aa		27.8	■■■□□ 2.04
CD55-205	ENST00000367067	TMPO	P42166	694 aa	Known RBP	27.79	■■■□□ 2.04
CD55-205	ENST00000367067	PRDM11	Q9NQV5	511 aa		27.79	■■■□□ 2.04
CD55-205	ENST00000367067	ERBB3	P21860	1342 aa		27.78	■■■□□ 2.04
CD55-205	ENST00000367067	CCDC27	Q2M243	656 aa		27.77	■■■□□ 2.04
CD55-205	ENST00000367067	LMO7	Q8WWI1	1683 aa		27.76	■■■□□ 2.04
CD55-205	ENST00000367067	NBPF6	Q5VWK0	638 aa		27.76	■■■□□ 2.04
CD55-205	ENST00000367067	WWC1	Q8IX03	1113 aa		27.76	■■■□□ 2.04
CD55-205	ENST00000367067	NBPF4	Q96M43	638 aa		27.76	■■■□□ 2.04
CD55-205	ENST00000367067	FAM208A	Q9UK61	1670 aa	Known RBP	27.76	■■■□□ 2.03
CD55-205	ENST00000367067	CAMTA1	Q9Y6Y1	1673 aa		27.76	■■■□□ 2.03
CD55-205	ENST00000367067	DLG5	Q8TDM6	1919 aa		27.76	■■■□□ 2.03
CD55-205	ENST00000367067	PHF23	Q9BUL5	403 aa	Predicted RBP	27.76	■■■□□ 2.03
CD55-205	ENST00000367067	NFE2L2	Q16236	605 aa		27.74	■■■□□ 2.03
CD55-205	ENST00000367067	RIPK4	P57078	832 aa		27.73	■■■□□ 2.03
CD55-205	ENST00000367067	GOLGA2	Q08379	1002 aa		27.73	■■■□□ 2.03
CD55-205	ENST00000367067	USHBP1	Q8N6Y0	703 aa		27.73	■■■□□ 2.03
CD55-205	ENST00000367067	CDCA7L	Q96GN5	454 aa		27.73	■■■□□ 2.03
CD55-205	ENST00000367067	NCAPD2	Q15021	1401 aa		27.72	■■■□□ 2.03
CD55-205	ENST00000367067	TRIM35	Q9UPQ4	493 aa		27.69	■■■□□ 2.02
CD55-205	ENST00000367067	FAM83G	A6ND36	823 aa		27.69	■■■□□ 2.02
CD55-205	ENST00000367067	COL14A1	Q05707	1796 aa	Known RBP	27.68	■■■□□ 2.02
CD55-205	ENST00000367067	WDR63	Q8IWG1	891 aa		27.68	■■■□□ 2.02
CD55-205	ENST00000367067	CSB-PGBD3	P0DP91	1061 aa		27.67	■■■□□ 2.02
CD55-205	ENST00000367067	HSPA1L	P34931	641 aa		27.67	■■■□□ 2.02
CD55-205	ENST00000367067	NLRP2	Q9NX02	1062 aa		27.67	■■■□□ 2.02
CD55-205	ENST00000367067	COL5A2	P05997	1499 aa	Predicted RBP	27.66	■■■□□ 2.02
CD55-205	ENST00000367067	SLFN5	Q08AF3	891 aa		27.64	■■■□□ 2.02
CD55-205	ENST00000367067	JCAD	Q9P266	1359 aa		27.64	■■■□□ 2.02
CD55-205	ENST00000367067		E9PSI1	815 aa		27.63	■■■□□ 2.01
CD55-205	ENST00000367067	LMOD3	Q0VAK6	560 aa		27.63	■■■□□ 2.01
CD55-205	ENST00000367067	SPINK5	Q9NQ38	1064 aa	Predicted RBP	27.63	■■■□□ 2.01
CD55-205	ENST00000367067	WDR17	Q8IZU2	1322 aa		27.63	■■■□□ 2.01
CD55-205	ENST00000367067	MTHFSD	Q2M296	383 aa	Known RBP	27.62	■■■□□ 2.01
CD55-205	ENST00000367067	GAS2L2	Q8NHY3	880 aa		27.62	■■■□□ 2.01
CD55-205	ENST00000367067	DUSP27	Q5VZP5	1158 aa		27.61	■■■□□ 2.01
CD55-205	ENST00000367067	TRMT2A	Q8IZ69	625 aa	Known RBP	27.61	■■■□□ 2.01
CD55-205	ENST00000367067	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.59	■■■□□ 2.01
CD55-205	ENST00000367067	NUTM2E	B1AL46	878 aa	Predicted RBP	27.59	■■■□□ 2.01
CD55-205	ENST00000367067	NUTM2A	Q8IVF1	878 aa	Predicted RBP	27.59	■■■□□ 2.01
CD55-205	ENST00000367067	BTG4	Q9NY30	223 aa		27.59	■■■□□ 2.01
CD55-205	ENST00000367067	PLCH1	Q4KWH8	1693 aa		27.58	■■■□□ 2.01
CD55-205	ENST00000367067	ADAMTS2	O95450	1211 aa		27.58	■■■□□ 2.01
CD55-205	ENST00000367067	EVA1C	P58658	441 aa		27.58	■■■□□ 2.01
CD55-205	ENST00000367067	IL16	Q14005	1332 aa		27.58	■■■□□ 2.01
CD55-205	ENST00000367067	TOM1L2	Q6ZVM7	507 aa		27.57	■■■□□ 2
CD55-205	ENST00000367067	FBXO41	Q8TF61	875 aa		27.57	■■■□□ 2
CD55-205	ENST00000367067	STRN4	Q9NRL3	753 aa		27.57	■■■□□ 2
CD55-205	ENST00000367067	CALD1	Q05682	793 aa	Known RBP	27.55	■■■□□ 2
CD55-205	ENST00000367067	RAPGEF4	Q8WZA2	1011 aa		27.55	■■■□□ 2
CD55-205	ENST00000367067	AMOT	Q4VCS5	1084 aa		27.55	■■■□□ 2
CD55-205	ENST00000367067	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.54	■■■□□ 2
CD55-205	ENST00000367067	MYH16	Q9H6N6	1097 aa		27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms