RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 IP6K1Q92551 441 aa27.31■■□□□ 1.96
CD55-203ENST00000367063 COL14A1Q05707 1796 aaKnown RBP27.31■■□□□ 1.96
CD55-203ENST00000367063 C8orf37Q96NL8 207 aa27.3■■□□□ 1.96
CD55-203ENST00000367063 COL18A1P39060 1754 aa27.3■■□□□ 1.96
CD55-203ENST00000367063 AXIN2Q9Y2T1 843 aa27.3■■□□□ 1.96
CD55-203ENST00000367063 HSP90AB2PQ58FF8 381 aa27.29■■□□□ 1.96
CD55-203ENST00000367063 CDK12Q9NYV4 1490 aaPredicted RBP27.29■■□□□ 1.96
CD55-203ENST00000367063 RGPD5Q99666 1765 aa27.28■■□□□ 1.96
CD55-203ENST00000367063 ABCC6O95255 1503 aa27.28■■□□□ 1.96
CD55-203ENST00000367063 NGLY1Q96IV0 654 aa27.27■■□□□ 1.96
CD55-203ENST00000367063 LMO7Q8WWI1 1683 aa27.27■■□□□ 1.96
CD55-203ENST00000367063 BTG4Q9NY30 223 aa27.27■■□□□ 1.96
CD55-203ENST00000367063 BLMP54132 1417 aaPredicted RBP27.26■■□□□ 1.95
CD55-203ENST00000367063 MIER1Q8N108 512 aa27.26■■□□□ 1.95
CD55-203ENST00000367063 CFAP53Q96M91 514 aa27.26■■□□□ 1.95
CD55-203ENST00000367063 PLCH1Q4KWH8 1693 aa27.26■■□□□ 1.95
CD55-203ENST00000367063 CAMTA1Q9Y6Y1 1673 aa27.26■■□□□ 1.95
CD55-203ENST00000367063 INSRP06213 1382 aa27.25■■□□□ 1.95
CD55-203ENST00000367063 LTV1Q96GA3 475 aaPredicted RBP27.24■■□□□ 1.95
CD55-203ENST00000367063 SLIT2O94813 1529 aa27.21■■□□□ 1.95
CD55-203ENST00000367063 EVA1CP58658 441 aa27.21■■□□□ 1.95
CD55-203ENST00000367063 ANKRD24Q8TF21 1146 aa27.21■■□□□ 1.95
CD55-203ENST00000367063 STRN4Q9NRL3 753 aa27.21■■□□□ 1.95
CD55-203ENST00000367063 NWD2Q9ULI1 1742 aa27.2■■□□□ 1.95
CD55-203ENST00000367063 COL5A2P05997 1499 aaPredicted RBP27.2■■□□□ 1.94
CD55-203ENST00000367063 ERBB3P21860 1342 aa27.2■■□□□ 1.94
CD55-203ENST00000367063 CSB-PGBD3P0DP91 1061 aa27.19■■□□□ 1.94
CD55-203ENST00000367063 EIF4A2Q14240 407 aaKnown RBP27.19■■□□□ 1.94
CD55-203ENST00000367063 FNBP4Q8N3X1 1017 aaPredicted RBP27.19■■□□□ 1.94
CD55-203ENST00000367063 COL3A1P02461 1466 aaPredicted RBP27.19■■□□□ 1.94
CD55-203ENST00000367063 DIAPH1O60610 1272 aaKnown RBP27.18■■□□□ 1.94
CD55-203ENST00000367063 CCDC184Q52MB2 194 aa27.18■■□□□ 1.94
CD55-203ENST00000367063 AFF2P51816 1311 aa27.17■■□□□ 1.94
CD55-203ENST00000367063 MRS2Q9HD23 443 aa27.17■■□□□ 1.94
CD55-203ENST00000367063 USP21Q9UK80 565 aa27.16■■□□□ 1.94
CD55-203ENST00000367063 NRAPQ86VF7 1730 aa27.16■■□□□ 1.94
CD55-203ENST00000367063 IL13P35225 146 aa27.15■■□□□ 1.94
CD55-203ENST00000367063 UNC5CLQ8IV45 518 aa27.15■■□□□ 1.94
CD55-203ENST00000367063 BCL9LQ86UU0 1499 aa27.15■■□□□ 1.94
CD55-203ENST00000367063 WDR17Q8IZU2 1322 aa27.15■■□□□ 1.94
CD55-203ENST00000367063 LARP1Q6PKG0 1096 aaKnown RBP27.14■■□□□ 1.93
CD55-203ENST00000367063 CCER2I3L3R5 266 aa27.13■■□□□ 1.93
CD55-203ENST00000367063 TOM1L2Q6ZVM7 507 aa27.12■■□□□ 1.93
CD55-203ENST00000367063 NUDCQ9Y266 331 aa27.12■■□□□ 1.93
CD55-203ENST00000367063 NLRP2Q9NX02 1062 aa27.11■■□□□ 1.93
CD55-203ENST00000367063 FAM208AQ9UK61 1670 aaKnown RBP27.11■■□□□ 1.93
CD55-203ENST00000367063 RGPD2P0DJD1 1756 aa27.11■■□□□ 1.93
CD55-203ENST00000367063 U2SURPO15042 1029 aaKnown RBP27.11■■□□□ 1.93
CD55-203ENST00000367063 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.1■■□□□ 1.93
CD55-203ENST00000367063 NBPF6Q5VWK0 638 aa27.09■■□□□ 1.93
CD55-203ENST00000367063 NBPF4Q96M43 638 aa27.09■■□□□ 1.93
CD55-203ENST00000367063 EYA1Q99502 592 aa27.09■■□□□ 1.93
CD55-203ENST00000367063 CRB1P82279 1406 aa27.09■■□□□ 1.93
CD55-203ENST00000367063 CCDC9Q9Y3X0 531 aaKnown RBP27.08■■□□□ 1.93
CD55-203ENST00000367063 USP35Q9P2H5 1018 aa27.07■■□□□ 1.92
CD55-203ENST00000367063 U2AF1L5P0DN76 240 aaPredicted RBP27.06■■□□□ 1.92
CD55-203ENST00000367063 U2AF1Q01081 240 aaKnown RBP eCLIP27.06■■□□□ 1.928e-9■■■□□ 15.7
CD55-203ENST00000367063 USHBP1Q8N6Y0 703 aa27.06■■□□□ 1.92
CD55-203ENST00000367063 PHF23Q9BUL5 403 aaPredicted RBP27.06■■□□□ 1.92
CD55-203ENST00000367063 IGSF1Q8N6C5 1336 aa27.06■■□□□ 1.92
CD55-203ENST00000367063 RGPD1P0DJD0 1748 aa27.06■■□□□ 1.92
CD55-203ENST00000367063 WDR43Q15061 677 aaKnown RBP eCLIP27.05■■□□□ 1.92
CD55-203ENST00000367063 VPS72Q15906 364 aa27.05■■□□□ 1.92
CD55-203ENST00000367063 ZNF772Q68DY9 489 aaPredicted RBP27.05■■□□□ 1.92
CD55-203ENST00000367063 CARD10Q9BWT7 1032 aa27.05■■□□□ 1.92
CD55-203ENST00000367063 TRPC5Q9UL62 973 aaPredicted RBP27.05■■□□□ 1.92
CD55-203ENST00000367063 SPATA31A5Q5VU36 1347 aa27.03■■□□□ 1.92
CD55-203ENST00000367063 SPATA31A7Q8IWB4 1347 aa27.03■■□□□ 1.92
CD55-203ENST00000367063 HMOX1P09601 288 aa27.02■■□□□ 1.92
CD55-203ENST00000367063 SULT6B1Q6IMI4 303 aa27.02■■□□□ 1.92
CD55-203ENST00000367063 PNISRQ8TF01 805 aaKnown RBP27.02■■□□□ 1.92
CD55-203ENST00000367063 SPATA31A1Q5TZJ5 1347 aa27.02■■□□□ 1.92
CD55-203ENST00000367063 QTRT2Q9H974 415 aaKnown RBP27.01■■□□□ 1.92
CD55-203ENST00000367063 ATRNO75882 1429 aa27.01■■□□□ 1.91
CD55-203ENST00000367063 AEBP1Q8IUX7 1158 aa27■■□□□ 1.91
CD55-203ENST00000367063 TCP11L2Q8N4U5 519 aa26.99■■□□□ 1.91
CD55-203ENST00000367063 ADAMTS8Q9UP79 889 aa26.98■■□□□ 1.91
CD55-203ENST00000367063 NCAPD2Q15021 1401 aa26.98■■□□□ 1.91
CD55-203ENST00000367063 GJD4Q96KN9 370 aaPredicted RBP26.98■■□□□ 1.91
CD55-203ENST00000367063 RGS17Q9UGC6 210 aaPredicted RBP26.98■■□□□ 1.91
CD55-203ENST00000367063 KDRP35968 1356 aa26.97■■□□□ 1.91
CD55-203ENST00000367063 FAM9BQ8IZU0 186 aa26.97■■□□□ 1.91
CD55-203ENST00000367063 THRAP3Q9Y2W1 955 aaKnown RBP26.96■■□□□ 1.91
CD55-203ENST00000367063 FCHSD2O94868 740 aa26.95■■□□□ 1.9
CD55-203ENST00000367063 RAPGEF4Q8WZA2 1011 aa26.95■■□□□ 1.9
CD55-203ENST00000367063 RSPH6AQ9H0K4 717 aa26.94■■□□□ 1.9
CD55-203ENST00000367063 GLI3P10071 1580 aa26.93■■□□□ 1.9
CD55-203ENST00000367063 IL2RBP14784 551 aa26.93■■□□□ 1.9
CD55-203ENST00000367063 PRKAR2BP31323 418 aa26.92■■□□□ 1.9
CD55-203ENST00000367063 FAM98CQ17RN3 349 aaKnown RBP26.92■■□□□ 1.9
CD55-203ENST00000367063 BARGINQ6ZT62 677 aa26.92■■□□□ 1.9
CD55-203ENST00000367063 TATP17735 454 aaPredicted RBP26.91■■□□□ 1.9
CD55-203ENST00000367063 PNNQ9H307 717 aaKnown RBP26.91■■□□□ 1.9
CD55-203ENST00000367063 MEGF6O75095 1541 aa26.91■■□□□ 1.9
CD55-203ENST00000367063 WNK3Q9BYP7 1800 aa26.9■■□□□ 1.9
CD55-203ENST00000367063 RBM6P78332 1123 aaKnown RBP26.89■■□□□ 1.89
CD55-203ENST00000367063 POTEAQ6S8J7 498 aa26.89■■□□□ 1.89
CD55-203ENST00000367063 CCDC146Q8IYE0 955 aa26.89■■□□□ 1.89
CD55-203ENST00000367063 PARP4Q9UKK3 1724 aaKnown RBP26.88■■□□□ 1.89
CD55-203ENST00000367063 DISP2A7MBM2 1401 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms