RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 USP21Q9UK80 565 aa18.74■□□□□ 0.59
NSMCE1-201ENST00000361439 HOXC9P31274 260 aa18.73■□□□□ 0.59
NSMCE1-201ENST00000361439 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
NSMCE1-201ENST00000361439 COL18A1P39060 1754 aa18.73■□□□□ 0.59
NSMCE1-201ENST00000361439 FBLN1P23142 703 aa18.72■□□□□ 0.59
NSMCE1-201ENST00000361439 AXIN2Q9Y2T1 843 aa18.72■□□□□ 0.59
NSMCE1-201ENST00000361439 LTN1O94822 1766 aa18.72■□□□□ 0.59
NSMCE1-201ENST00000361439 PLCH1Q4KWH8 1693 aa18.72■□□□□ 0.59
NSMCE1-201ENST00000361439 CAMTA1Q9Y6Y1 1673 aa18.72■□□□□ 0.59
NSMCE1-201ENST00000361439 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.71■□□□□ 0.59
NSMCE1-201ENST00000361439 INSRP06213 1382 aa18.71■□□□□ 0.59
NSMCE1-201ENST00000361439 ZBTB7CA1YPR0 619 aa18.71■□□□□ 0.59
NSMCE1-201ENST00000361439 EVA1CP58658 441 aa18.71■□□□□ 0.59
NSMCE1-201ENST00000361439 TRPC5Q9UL62 973 aaPredicted RBP18.71■□□□□ 0.59
NSMCE1-201ENST00000361439 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
NSMCE1-201ENST00000361439 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
NSMCE1-201ENST00000361439 VPS72Q15906 364 aa18.7■□□□□ 0.58
NSMCE1-201ENST00000361439 ERBB3P21860 1342 aa18.7■□□□□ 0.58
NSMCE1-201ENST00000361439 CDK12Q9NYV4 1490 aaPredicted RBP18.69■□□□□ 0.58
NSMCE1-201ENST00000361439 MAP2P11137 1827 aaKnown RBP18.69■□□□□ 0.58
NSMCE1-201ENST00000361439 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
NSMCE1-201ENST00000361439 ATRNO75882 1429 aa18.68■□□□□ 0.58
NSMCE1-201ENST00000361439 PRKRIP1Q9H875 184 aaPredicted RBP18.68■□□□□ 0.58
NSMCE1-201ENST00000361439 QTRT2Q9H974 415 aaKnown RBP18.68■□□□□ 0.58
NSMCE1-201ENST00000361439 RGS17Q9UGC6 210 aaPredicted RBP18.68■□□□□ 0.58
NSMCE1-201ENST00000361439 NRAPQ86VF7 1730 aa18.68■□□□□ 0.58
NSMCE1-201ENST00000361439 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
NSMCE1-201ENST00000361439 PPP2R1AP30153 589 aa18.67■□□□□ 0.58
NSMCE1-201ENST00000361439 MTHFSP49914 203 aa18.67■□□□□ 0.58
NSMCE1-201ENST00000361439 CRB1P82279 1406 aa18.66■□□□□ 0.58
NSMCE1-201ENST00000361439 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
NSMCE1-201ENST00000361439 ANKRD24Q8TF21 1146 aa18.66■□□□□ 0.58
NSMCE1-201ENST00000361439 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
NSMCE1-201ENST00000361439 STRN4Q9NRL3 753 aa18.65■□□□□ 0.58
NSMCE1-201ENST00000361439 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
NSMCE1-201ENST00000361439 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
NSMCE1-201ENST00000361439 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
NSMCE1-201ENST00000361439 MYBBP1AQ9BQG0 1328 aaKnown RBP18.65■□□□□ 0.58
NSMCE1-201ENST00000361439 PEAK1Q9H792 1746 aa18.65■□□□□ 0.58
NSMCE1-201ENST00000361439 ANP32CO43423 234 aa18.64■□□□□ 0.57
NSMCE1-201ENST00000361439 CSB-PGBD3P0DP91 1061 aa18.64■□□□□ 0.57
NSMCE1-201ENST00000361439 LARP1Q6PKG0 1096 aaKnown RBP18.64■□□□□ 0.57
NSMCE1-201ENST00000361439 GJD4Q96KN9 370 aaPredicted RBP18.64■□□□□ 0.57
NSMCE1-201ENST00000361439 CARD10Q9BWT7 1032 aa18.64■□□□□ 0.57
NSMCE1-201ENST00000361439 RBM6P78332 1123 aaKnown RBP18.63■□□□□ 0.57
NSMCE1-201ENST00000361439 TOM1L2Q6ZVM7 507 aa18.63■□□□□ 0.57
NSMCE1-201ENST00000361439 CFAP53Q96M91 514 aa18.63■□□□□ 0.57
NSMCE1-201ENST00000361439 SPATA31A1Q5TZJ5 1347 aa18.63■□□□□ 0.57
NSMCE1-201ENST00000361439 FAM208AQ9UK61 1670 aaKnown RBP18.62■□□□□ 0.57
NSMCE1-201ENST00000361439 RXRBP28702 533 aa18.61■□□□□ 0.57
NSMCE1-201ENST00000361439 BARGINQ6ZT62 677 aa18.61■□□□□ 0.57
NSMCE1-201ENST00000361439 TCP11L2Q8N4U5 519 aa18.61■□□□□ 0.57
NSMCE1-201ENST00000361439 ONECUT3O60422 494 aaPredicted RBP18.6■□□□□ 0.57
NSMCE1-201ENST00000361439 EIF4A2Q14240 407 aaKnown RBP18.6■□□□□ 0.57
NSMCE1-201ENST00000361439 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
NSMCE1-201ENST00000361439 NLRP2Q9NX02 1062 aa18.6■□□□□ 0.57
NSMCE1-201ENST00000361439 CCDC9Q9Y3X0 531 aaKnown RBP18.6■□□□□ 0.57
NSMCE1-201ENST00000361439 RGPD5Q99666 1765 aa18.6■□□□□ 0.57
NSMCE1-201ENST00000361439 DIAPH1O60610 1272 aaKnown RBP18.59■□□□□ 0.57
NSMCE1-201ENST00000361439 POTEAQ6S8J7 498 aa18.59■□□□□ 0.57
NSMCE1-201ENST00000361439 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
NSMCE1-201ENST00000361439 IL13P35225 146 aa18.58■□□□□ 0.56
NSMCE1-201ENST00000361439 PLEKHG2Q9H7P9 1386 aa18.57■□□□□ 0.56
NSMCE1-201ENST00000361439 NBPF6Q5VWK0 638 aa18.57■□□□□ 0.56
NSMCE1-201ENST00000361439 NBPF4Q96M43 638 aa18.57■□□□□ 0.56
NSMCE1-201ENST00000361439 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
NSMCE1-201ENST00000361439 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
NSMCE1-201ENST00000361439 NUDCQ9Y266 331 aa18.56■□□□□ 0.56
NSMCE1-201ENST00000361439 GLI3P10071 1580 aa18.55■□□□□ 0.56
NSMCE1-201ENST00000361439 IGSF1Q8N6C5 1336 aa18.55■□□□□ 0.56
NSMCE1-201ENST00000361439 DIEXFQ68CQ4 756 aaKnown RBP18.55■□□□□ 0.56
NSMCE1-201ENST00000361439 EYA1Q99502 592 aa18.55■□□□□ 0.56
NSMCE1-201ENST00000361439 USP35Q9P2H5 1018 aa18.54■□□□□ 0.56
NSMCE1-201ENST00000361439 IL2RBP14784 551 aa18.52■□□□□ 0.56
NSMCE1-201ENST00000361439 FAM98CQ17RN3 349 aaKnown RBP18.52■□□□□ 0.56
NSMCE1-201ENST00000361439 KDRP35968 1356 aa18.52■□□□□ 0.55
NSMCE1-201ENST00000361439 DISP2A7MBM2 1401 aa18.51■□□□□ 0.55
NSMCE1-201ENST00000361439 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
NSMCE1-201ENST00000361439 RGPD1P0DJD0 1748 aa18.49■□□□□ 0.55
NSMCE1-201ENST00000361439 SEPT12Q8IYM1 358 aa18.49■□□□□ 0.55
NSMCE1-201ENST00000361439 THSD7AQ9UPZ6 1657 aa18.49■□□□□ 0.55
NSMCE1-201ENST00000361439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.48■□□□□ 0.55
NSMCE1-201ENST00000361439 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
NSMCE1-201ENST00000361439 SULT6B1Q6IMI4 303 aa18.47■□□□□ 0.55
NSMCE1-201ENST00000361439 OVOS2A0A0G2JMS6 1433 aa18.47■□□□□ 0.55
NSMCE1-201ENST00000361439 EXOC5O00471 708 aa18.46■□□□□ 0.55
NSMCE1-201ENST00000361439 U2SURPO15042 1029 aaKnown RBP18.46■□□□□ 0.55
NSMCE1-201ENST00000361439 FCHSD2O94868 740 aa18.46■□□□□ 0.55
NSMCE1-201ENST00000361439 DDB1Q16531 1140 aa18.46■□□□□ 0.55
NSMCE1-201ENST00000361439 USHBP1Q8N6Y0 703 aa18.46■□□□□ 0.55
NSMCE1-201ENST00000361439 PNNQ9H307 717 aaKnown RBP18.46■□□□□ 0.55
NSMCE1-201ENST00000361439 RGS12O14924 1447 aa18.46■□□□□ 0.55
NSMCE1-201ENST00000361439 PARP4Q9UKK3 1724 aaKnown RBP18.46■□□□□ 0.55
NSMCE1-201ENST00000361439 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
NSMCE1-201ENST00000361439 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
NSMCE1-201ENST00000361439 A0A0G2JS52 829 aa18.44■□□□□ 0.54
NSMCE1-201ENST00000361439 U2AF1L5P0DN76 240 aaPredicted RBP18.44■□□□□ 0.54
NSMCE1-201ENST00000361439 U2AF1Q01081 240 aaKnown RBP eCLIP18.44■□□□□ 0.54
NSMCE1-201ENST00000361439 MYT1Q01538 1121 aa18.44■□□□□ 0.54
NSMCE1-201ENST00000361439 AMOTQ4VCS5 1084 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms