RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 DDX10Q13206 875 aaKnown RBP26.1■■□□□ 1.77
HLA-DRB1-201ENST00000360004 VPS72Q15906 364 aa26.1■■□□□ 1.77
HLA-DRB1-201ENST00000360004 ATRNO75882 1429 aa26.1■■□□□ 1.77
HLA-DRB1-201ENST00000360004 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.09■■□□□ 1.77
HLA-DRB1-201ENST00000360004 MAP3K19Q56UN5 1328 aa26.09■■□□□ 1.77
HLA-DRB1-201ENST00000360004 A0A0G2JS52 829 aa26.08■■□□□ 1.77
HLA-DRB1-201ENST00000360004 PER1O15534 1290 aaPredicted RBP26.08■■□□□ 1.77
HLA-DRB1-201ENST00000360004 MYT1Q01538 1121 aa26.08■■□□□ 1.77
HLA-DRB1-201ENST00000360004 AMER1Q5JTC6 1135 aaPredicted RBP26.08■■□□□ 1.77
HLA-DRB1-201ENST00000360004 GJD4Q96KN9 370 aaPredicted RBP26.08■■□□□ 1.77
HLA-DRB1-201ENST00000360004 CAMTA1Q9Y6Y1 1673 aa26.08■■□□□ 1.77
HLA-DRB1-201ENST00000360004 LTN1O94822 1766 aa26.07■■□□□ 1.76
HLA-DRB1-201ENST00000360004 ANKRD26Q9UPS8 1709 aa26.07■■□□□ 1.76
HLA-DRB1-201ENST00000360004 LMO7Q8WWI1 1683 aa26.06■■□□□ 1.76
HLA-DRB1-201ENST00000360004 NRAPQ86VF7 1730 aa26.06■■□□□ 1.76
HLA-DRB1-201ENST00000360004 TOM1L2Q6ZVM7 507 aa26.06■■□□□ 1.76
HLA-DRB1-201ENST00000360004 USP35Q9P2H5 1018 aa26.06■■□□□ 1.76
HLA-DRB1-201ENST00000360004 AXIN2Q9Y2T1 843 aa26.06■■□□□ 1.76
HLA-DRB1-201ENST00000360004 COL5A2P05997 1499 aaPredicted RBP26.05■■□□□ 1.76
HLA-DRB1-201ENST00000360004 ABCC6O95255 1503 aa26.05■■□□□ 1.76
HLA-DRB1-201ENST00000360004 IP6K1Q92551 441 aa26.05■■□□□ 1.76
HLA-DRB1-201ENST00000360004 LTV1Q96GA3 475 aaPredicted RBP26.05■■□□□ 1.76
HLA-DRB1-201ENST00000360004 LARP1Q6PKG0 1096 aaKnown RBP26.04■■□□□ 1.76
HLA-DRB1-201ENST00000360004 RTL1A6NKG5 1358 aa26.04■■□□□ 1.76
HLA-DRB1-201ENST00000360004 HOXC9P31274 260 aa26.03■■□□□ 1.76
HLA-DRB1-201ENST00000360004 ANKRD24Q8TF21 1146 aa26.03■■□□□ 1.76
HLA-DRB1-201ENST00000360004 EMILIN1Q9Y6C2 1016 aa26.02■■□□□ 1.76
HLA-DRB1-201ENST00000360004 BLMP54132 1417 aaPredicted RBP26.02■■□□□ 1.76
HLA-DRB1-201ENST00000360004 FLT4P35916 1363 aa26.01■■□□□ 1.75
HLA-DRB1-201ENST00000360004 SPATA31A5Q5VU36 1347 aa26.01■■□□□ 1.75
HLA-DRB1-201ENST00000360004 SPATA31A7Q8IWB4 1347 aa26.01■■□□□ 1.75
HLA-DRB1-201ENST00000360004 WDR17Q8IZU2 1322 aa26.01■■□□□ 1.75
HLA-DRB1-201ENST00000360004 COL18A1P39060 1754 aa26■■□□□ 1.75
HLA-DRB1-201ENST00000360004 SMG6Q86US8 1419 aaKnown RBP26■■□□□ 1.75
HLA-DRB1-201ENST00000360004 NPC1L1Q9UHC9 1359 aa26■■□□□ 1.75
HLA-DRB1-201ENST00000360004 NLRP2Q9NX02 1062 aa26■■□□□ 1.75
HLA-DRB1-201ENST00000360004 CRB1P82279 1406 aa25.99■■□□□ 1.75
HLA-DRB1-201ENST00000360004 KIF24Q5T7B8 1368 aa25.98■■□□□ 1.75
HLA-DRB1-201ENST00000360004 SPATA31A1Q5TZJ5 1347 aa25.98■■□□□ 1.75
HLA-DRB1-201ENST00000360004 FAM98CQ17RN3 349 aaKnown RBP25.98■■□□□ 1.75
HLA-DRB1-201ENST00000360004 ERBB3P21860 1342 aa25.97■■□□□ 1.75
HLA-DRB1-201ENST00000360004 TCP11L2Q8N4U5 519 aa25.97■■□□□ 1.75
HLA-DRB1-201ENST00000360004 POLKQ9UBT6 870 aa25.97■■□□□ 1.75
HLA-DRB1-201ENST00000360004 RGPD5Q99666 1765 aa25.97■■□□□ 1.75
HLA-DRB1-201ENST00000360004 ILDR2Q71H61 639 aa25.96■■□□□ 1.75
HLA-DRB1-201ENST00000360004 GLI3P10071 1580 aa25.95■■□□□ 1.75
HLA-DRB1-201ENST00000360004 HSP90AB2PQ58FF8 381 aa25.95■■□□□ 1.74
HLA-DRB1-201ENST00000360004 INSRP06213 1382 aa25.94■■□□□ 1.74
HLA-DRB1-201ENST00000360004 CDK12Q9NYV4 1490 aaPredicted RBP25.93■■□□□ 1.74
HLA-DRB1-201ENST00000360004 CARD10Q9BWT7 1032 aa25.93■■□□□ 1.74
HLA-DRB1-201ENST00000360004 THRAP3Q9Y2W1 955 aaKnown RBP25.93■■□□□ 1.74
HLA-DRB1-201ENST00000360004 RGS12O14924 1447 aa25.92■■□□□ 1.74
HLA-DRB1-201ENST00000360004 SEPT12Q8IYM1 358 aa25.92■■□□□ 1.74
HLA-DRB1-201ENST00000360004 MAP2P11137 1827 aaKnown RBP25.92■■□□□ 1.74
HLA-DRB1-201ENST00000360004 PEAK1Q9H792 1746 aa25.9■■□□□ 1.74
HLA-DRB1-201ENST00000360004 BARGINQ6ZT62 677 aa25.89■■□□□ 1.74
HLA-DRB1-201ENST00000360004 MTHFSP49914 203 aa25.88■■□□□ 1.73
HLA-DRB1-201ENST00000360004 CDCA7Q9BWT1 371 aaPredicted RBP25.86■■□□□ 1.73
HLA-DRB1-201ENST00000360004 FAM208AQ9UK61 1670 aaKnown RBP25.86■■□□□ 1.73
HLA-DRB1-201ENST00000360004 CFAP53Q96M91 514 aa25.85■■□□□ 1.73
HLA-DRB1-201ENST00000360004 ONECUT3O60422 494 aaPredicted RBP25.84■■□□□ 1.73
HLA-DRB1-201ENST00000360004 PDE3BQ13370 1112 aa25.83■■□□□ 1.73
HLA-DRB1-201ENST00000360004 USHBP1Q8N6Y0 703 aa25.83■■□□□ 1.73
HLA-DRB1-201ENST00000360004 IL2RBP14784 551 aa25.82■■□□□ 1.72
HLA-DRB1-201ENST00000360004 EIF4A2Q14240 407 aaKnown RBP25.82■■□□□ 1.72
HLA-DRB1-201ENST00000360004 NBPF6Q5VWK0 638 aa25.82■■□□□ 1.72
HLA-DRB1-201ENST00000360004 KRT27Q7Z3Y8 459 aa25.82■■□□□ 1.72
HLA-DRB1-201ENST00000360004 NBPF4Q96M43 638 aa25.82■■□□□ 1.72
HLA-DRB1-201ENST00000360004 PPP2R1AP30153 589 aa25.81■■□□□ 1.72
HLA-DRB1-201ENST00000360004 RALBP1Q15311 655 aa25.81■■□□□ 1.72
HLA-DRB1-201ENST00000360004 DDB1Q16531 1140 aa25.8■■□□□ 1.72
HLA-DRB1-201ENST00000360004 RAPGEF4Q8WZA2 1011 aa25.8■■□□□ 1.72
HLA-DRB1-201ENST00000360004 PARD3Q8TEW0 1356 aa25.79■■□□□ 1.72
HLA-DRB1-201ENST00000360004 EXOC5O00471 708 aa25.78■■□□□ 1.72
HLA-DRB1-201ENST00000360004 THSD7AQ9UPZ6 1657 aa25.77■■□□□ 1.72
HLA-DRB1-201ENST00000360004 DIAPH1O60610 1272 aaKnown RBP25.77■■□□□ 1.72
HLA-DRB1-201ENST00000360004 TATP17735 454 aaPredicted RBP25.76■■□□□ 1.71
HLA-DRB1-201ENST00000360004 EYA1Q99502 592 aa25.76■■□□□ 1.71
HLA-DRB1-201ENST00000360004 RGPD2P0DJD1 1756 aa25.74■■□□□ 1.71
HLA-DRB1-201ENST00000360004 U2SURPO15042 1029 aaKnown RBP25.73■■□□□ 1.71
HLA-DRB1-201ENST00000360004 DISP2A7MBM2 1401 aa25.72■■□□□ 1.71
HLA-DRB1-201ENST00000360004 WNK3Q9BYP7 1800 aa25.72■■□□□ 1.71
HLA-DRB1-201ENST00000360004 NUDCQ9Y266 331 aa25.72■■□□□ 1.71
HLA-DRB1-201ENST00000360004 PARP4Q9UKK3 1724 aaKnown RBP25.71■■□□□ 1.71
HLA-DRB1-201ENST00000360004 MYBBP1AQ9BQG0 1328 aaKnown RBP25.71■■□□□ 1.71
HLA-DRB1-201ENST00000360004 ANP32CO43423 234 aa25.71■■□□□ 1.71
HLA-DRB1-201ENST00000360004 IL13P35225 146 aa25.71■■□□□ 1.71
HLA-DRB1-201ENST00000360004 BRWD3Q6RI45 1802 aa25.71■■□□□ 1.71
HLA-DRB1-201ENST00000360004 FAM182BQ5T319 152 aa25.7■■□□□ 1.7
HLA-DRB1-201ENST00000360004 IGSF1Q8N6C5 1336 aa25.69■■□□□ 1.7
HLA-DRB1-201ENST00000360004 PRKRIP1Q9H875 184 aaPredicted RBP25.69■■□□□ 1.7
HLA-DRB1-201ENST00000360004 LRRC37A3O60309 1634 aa25.69■■□□□ 1.7
HLA-DRB1-201ENST00000360004 TNS2Q63HR2 1409 aa25.69■■□□□ 1.7
HLA-DRB1-201ENST00000360004 SULT6B1Q6IMI4 303 aa25.68■■□□□ 1.7
HLA-DRB1-201ENST00000360004 ZCRB1Q8TBF4 217 aaKnown RBP25.67■■□□□ 1.7
HLA-DRB1-201ENST00000360004 DDX54Q8TDD1 881 aaKnown RBP25.67■■□□□ 1.7
HLA-DRB1-201ENST00000360004 MEGF6O75095 1541 aa25.67■■□□□ 1.7
HLA-DRB1-201ENST00000360004 FAM196AQ6ZSG2 479 aa25.66■■□□□ 1.7
HLA-DRB1-201ENST00000360004 SOCS7O14512 581 aa25.65■■□□□ 1.7
HLA-DRB1-201ENST00000360004 SPG7Q9UQ90 795 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms