RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 LTN1O94822 1766 aa33.14■■■□□ 2.9
ALKAL1-201ENST00000358543 ATRNO75882 1429 aa33.13■■■□□ 2.89
ALKAL1-201ENST00000358543 VPS72Q15906 364 aa33.13■■■□□ 2.89
ALKAL1-201ENST00000358543 NRAPQ86VF7 1730 aa33.13■■■□□ 2.89
ALKAL1-201ENST00000358543 IP6K1Q92551 441 aa33.12■■■□□ 2.89
ALKAL1-201ENST00000358543 RRS1Q15050 365 aaKnown RBP33.11■■■□□ 2.89
ALKAL1-201ENST00000358543 CC2D1BQ5T0F9 858 aaKnown RBP33.11■■■□□ 2.89
ALKAL1-201ENST00000358543 KIF24Q5T7B8 1368 aa33.1■■■□□ 2.89
ALKAL1-201ENST00000358543 EVA1CP58658 441 aa33.1■■■□□ 2.89
ALKAL1-201ENST00000358543 COL5A2P05997 1499 aaPredicted RBP33.09■■■□□ 2.89
ALKAL1-201ENST00000358543 RTL1A6NKG5 1358 aa33.09■■■□□ 2.89
ALKAL1-201ENST00000358543 AMPHP49418 695 aa33.08■■■□□ 2.89
ALKAL1-201ENST00000358543 BLMP54132 1417 aaPredicted RBP33.07■■■□□ 2.88
ALKAL1-201ENST00000358543 HOXC9P31274 260 aa33.06■■■□□ 2.88
ALKAL1-201ENST00000358543 TNNT2P45379 298 aaPredicted RBP33.06■■■□□ 2.88
ALKAL1-201ENST00000358543 RBM6P78332 1123 aaKnown RBP33.06■■■□□ 2.88
ALKAL1-201ENST00000358543 GJD4Q96KN9 370 aaPredicted RBP33.06■■■□□ 2.88
ALKAL1-201ENST00000358543 STRN4Q9NRL3 753 aa33.06■■■□□ 2.88
ALKAL1-201ENST00000358543 POLKQ9UBT6 870 aa33.06■■■□□ 2.88
ALKAL1-201ENST00000358543 RXRBP28702 533 aa33.05■■■□□ 2.88
ALKAL1-201ENST00000358543 MAP2P11137 1827 aaKnown RBP33.04■■■□□ 2.88
ALKAL1-201ENST00000358543 EMILIN1Q9Y6C2 1016 aa33.03■■■□□ 2.88
ALKAL1-201ENST00000358543 SPATA31A5Q5VU36 1347 aa33.02■■■□□ 2.88
ALKAL1-201ENST00000358543 SPATA31A7Q8IWB4 1347 aa33.02■■■□□ 2.88
ALKAL1-201ENST00000358543 RGPD5Q99666 1765 aa33.02■■■□□ 2.88
ALKAL1-201ENST00000358543 FLT4P35916 1363 aa33.02■■■□□ 2.88
ALKAL1-201ENST00000358543 LARP1Q6PKG0 1096 aaKnown RBP33.02■■■□□ 2.88
ALKAL1-201ENST00000358543 WDR17Q8IZU2 1322 aa33.02■■■□□ 2.88
ALKAL1-201ENST00000358543 CCDC9Q9Y3X0 531 aaKnown RBP33■■■□□ 2.87
ALKAL1-201ENST00000358543 ERBB3P21860 1342 aa33■■■□□ 2.87
ALKAL1-201ENST00000358543 INSRP06213 1382 aa32.98■■■□□ 2.87
ALKAL1-201ENST00000358543 CRB1P82279 1406 aa32.98■■■□□ 2.87
ALKAL1-201ENST00000358543 SMG6Q86US8 1419 aaKnown RBP32.98■■■□□ 2.87
ALKAL1-201ENST00000358543 ANKRD24Q8TF21 1146 aa32.98■■■□□ 2.87
ALKAL1-201ENST00000358543 PEAK1Q9H792 1746 aa32.98■■■□□ 2.87
ALKAL1-201ENST00000358543 SPATA31A1Q5TZJ5 1347 aa32.98■■■□□ 2.87
ALKAL1-201ENST00000358543 HSP90AB2PQ58FF8 381 aa32.97■■■□□ 2.87
ALKAL1-201ENST00000358543 PPM1GO15355 546 aaPredicted RBP32.96■■■□□ 2.87
ALKAL1-201ENST00000358543 CSB-PGBD3P0DP91 1061 aa32.96■■■□□ 2.87
ALKAL1-201ENST00000358543 CNGB1Q14028 1251 aaPredicted RBP32.96■■■□□ 2.87
ALKAL1-201ENST00000358543 GLI3P10071 1580 aa32.96■■■□□ 2.87
ALKAL1-201ENST00000358543 TOM1L2Q6ZVM7 507 aa32.95■■■□□ 2.87
ALKAL1-201ENST00000358543 ONECUT3O60422 494 aaPredicted RBP32.94■■■□□ 2.86
ALKAL1-201ENST00000358543 CDK12Q9NYV4 1490 aaPredicted RBP32.93■■■□□ 2.86
ALKAL1-201ENST00000358543 CARD10Q9BWT7 1032 aa32.93■■■□□ 2.86
ALKAL1-201ENST00000358543 THRAP3Q9Y2W1 955 aaKnown RBP32.93■■■□□ 2.86
ALKAL1-201ENST00000358543 TCP11L2Q8N4U5 519 aa32.91■■■□□ 2.86
ALKAL1-201ENST00000358543 BARGINQ6ZT62 677 aa32.9■■■□□ 2.86
ALKAL1-201ENST00000358543 LTV1Q96GA3 475 aaPredicted RBP32.9■■■□□ 2.86
ALKAL1-201ENST00000358543 PARD3Q8TEW0 1356 aa32.9■■■□□ 2.86
ALKAL1-201ENST00000358543 MTHFSP49914 203 aa32.89■■■□□ 2.86
ALKAL1-201ENST00000358543 USP35Q9P2H5 1018 aa32.89■■■□□ 2.86
ALKAL1-201ENST00000358543 RALBP1Q15311 655 aa32.87■■■□□ 2.85
ALKAL1-201ENST00000358543 NLRP2Q9NX02 1062 aa32.87■■■□□ 2.85
ALKAL1-201ENST00000358543 FAM208AQ9UK61 1670 aaKnown RBP32.86■■■□□ 2.85
ALKAL1-201ENST00000358543 FAM98CQ17RN3 349 aaKnown RBP32.86■■■□□ 2.85
ALKAL1-201ENST00000358543 PPP2R1AP30153 589 aa32.84■■■□□ 2.85
ALKAL1-201ENST00000358543 RGS12O14924 1447 aa32.83■■■□□ 2.85
ALKAL1-201ENST00000358543 ILDR2Q71H61 639 aa32.82■■■□□ 2.84
ALKAL1-201ENST00000358543 EIF4A2Q14240 407 aaKnown RBP32.81■■■□□ 2.84
ALKAL1-201ENST00000358543 NBPF6Q5VWK0 638 aa32.81■■■□□ 2.84
ALKAL1-201ENST00000358543 NBPF4Q96M43 638 aa32.81■■■□□ 2.84
ALKAL1-201ENST00000358543 CDCA7Q9BWT1 371 aaPredicted RBP32.81■■■□□ 2.84
ALKAL1-201ENST00000358543 SEPT12Q8IYM1 358 aa32.8■■■□□ 2.84
ALKAL1-201ENST00000358543 THSD7AQ9UPZ6 1657 aa32.77■■■□□ 2.84
ALKAL1-201ENST00000358543 PRKRIP1Q9H875 184 aaPredicted RBP32.76■■■□□ 2.83
ALKAL1-201ENST00000358543 IL13P35225 146 aa32.75■■■□□ 2.83
ALKAL1-201ENST00000358543 EYA1Q99502 592 aa32.75■■■□□ 2.83
ALKAL1-201ENST00000358543 RGPD2P0DJD1 1756 aa32.74■■■□□ 2.83
ALKAL1-201ENST00000358543 DISP2A7MBM2 1401 aa32.74■■■□□ 2.83
ALKAL1-201ENST00000358543 NCAPD2Q15021 1401 aa32.72■■■□□ 2.83
ALKAL1-201ENST00000358543 A0A0G2JS52 829 aa32.72■■■□□ 2.83
ALKAL1-201ENST00000358543 IL2RBP14784 551 aa32.72■■■□□ 2.83
ALKAL1-201ENST00000358543 MYT1Q01538 1121 aa32.72■■■□□ 2.83
ALKAL1-201ENST00000358543 CFAP53Q96M91 514 aa32.72■■■□□ 2.83
ALKAL1-201ENST00000358543 DIAPH1O60610 1272 aaKnown RBP32.71■■■□□ 2.83
ALKAL1-201ENST00000358543 MYBBP1AQ9BQG0 1328 aaKnown RBP32.7■■■□□ 2.82
ALKAL1-201ENST00000358543 WNK3Q9BYP7 1800 aa32.7■■■□□ 2.82
ALKAL1-201ENST00000358543 COL3A1P02461 1466 aaPredicted RBP32.69■■■□□ 2.82
ALKAL1-201ENST00000358543 USHBP1Q8N6Y0 703 aa32.69■■■□□ 2.82
ALKAL1-201ENST00000358543 IGSF1Q8N6C5 1336 aa32.69■■■□□ 2.82
ALKAL1-201ENST00000358543 PARP4Q9UKK3 1724 aaKnown RBP32.68■■■□□ 2.82
ALKAL1-201ENST00000358543 KRT27Q7Z3Y8 459 aa32.67■■■□□ 2.82
ALKAL1-201ENST00000358543 DDB1Q16531 1140 aa32.66■■■□□ 2.82
ALKAL1-201ENST00000358543 BRWD3Q6RI45 1802 aa32.65■■■□□ 2.82
ALKAL1-201ENST00000358543 EXOC5O00471 708 aa32.64■■■□□ 2.82
ALKAL1-201ENST00000358543 RAPGEF4Q8WZA2 1011 aa32.64■■■□□ 2.82
ALKAL1-201ENST00000358543 RGPD1P0DJD0 1748 aa32.63■■■□□ 2.81
ALKAL1-201ENST00000358543 ANP32CO43423 234 aa32.62■■■□□ 2.81
ALKAL1-201ENST00000358543 PDE3BQ13370 1112 aa32.62■■■□□ 2.81
ALKAL1-201ENST00000358543 TATP17735 454 aaPredicted RBP32.61■■■□□ 2.81
ALKAL1-201ENST00000358543 LRRC37A3O60309 1634 aa32.6■■■□□ 2.81
ALKAL1-201ENST00000358543 MEGF6O75095 1541 aa32.6■■■□□ 2.81
ALKAL1-201ENST00000358543 KDRP35968 1356 aa32.59■■■□□ 2.81
ALKAL1-201ENST00000358543 PLEKHG2Q9H7P9 1386 aa32.59■■■□□ 2.81
ALKAL1-201ENST00000358543 NUDCQ9Y266 331 aa32.59■■■□□ 2.81
ALKAL1-201ENST00000358543 OVOS2A0A0G2JMS6 1433 aa32.59■■■□□ 2.81
ALKAL1-201ENST00000358543 SULT6B1Q6IMI4 303 aa32.58■■■□□ 2.81
ALKAL1-201ENST00000358543 TNS2Q63HR2 1409 aa32.58■■■□□ 2.81
ALKAL1-201ENST00000358543 ZCRB1Q8TBF4 217 aaKnown RBP32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms