RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 PRDM11Q9NQV5 511 aa24.07■■□□□ 1.44
SDCBP2-201ENST00000339987 COL3A1P02461 1466 aaPredicted RBP24.06■■□□□ 1.44
SDCBP2-201ENST00000339987 NUTM2BA6NNL0 878 aaPredicted RBP24.05■■□□□ 1.44
SDCBP2-201ENST00000339987 NUTM2EB1AL46 878 aaPredicted RBP24.05■■□□□ 1.44
SDCBP2-201ENST00000339987 NUTM2AQ8IVF1 878 aaPredicted RBP24.05■■□□□ 1.44
SDCBP2-201ENST00000339987 COL14A1Q05707 1796 aaKnown RBP24.05■■□□□ 1.44
SDCBP2-201ENST00000339987 BLMP54132 1417 aaPredicted RBP24.05■■□□□ 1.44
SDCBP2-201ENST00000339987 LMO7Q8WWI1 1683 aa24.05■■□□□ 1.44
SDCBP2-201ENST00000339987 ZBTB7CA1YPR0 619 aa24.04■■□□□ 1.44
SDCBP2-201ENST00000339987 LRP6O75581 1613 aa24.04■■□□□ 1.44
SDCBP2-201ENST00000339987 FAM83GA6ND36 823 aa24.01■■□□□ 1.43
SDCBP2-201ENST00000339987 ADAMTS2O95450 1211 aa24.01■■□□□ 1.43
SDCBP2-201ENST00000339987 CHRNA2Q15822 529 aa24.01■■□□□ 1.43
SDCBP2-201ENST00000339987 CCDC184Q52MB2 194 aa24.01■■□□□ 1.43
SDCBP2-201ENST00000339987 HSP90AB2PQ58FF8 381 aa24.01■■□□□ 1.43
SDCBP2-201ENST00000339987 MRS2Q9HD23 443 aa24.01■■□□□ 1.43
SDCBP2-201ENST00000339987 AXIN2Q9Y2T1 843 aa24■■□□□ 1.43
SDCBP2-201ENST00000339987 DIAPH1O60610 1272 aaKnown RBP23.99■■□□□ 1.43
SDCBP2-201ENST00000339987 CAMTA1Q9Y6Y1 1673 aa23.99■■□□□ 1.43
SDCBP2-201ENST00000339987 RGPD5Q99666 1765 aa23.98■■□□□ 1.43
SDCBP2-201ENST00000339987 IL13P35225 146 aa23.97■■□□□ 1.43
SDCBP2-201ENST00000339987 EIF4A2Q14240 407 aaKnown RBP23.97■■□□□ 1.43
SDCBP2-201ENST00000339987 PLCH1Q4KWH8 1693 aa23.97■■□□□ 1.43
SDCBP2-201ENST00000339987 NWD2Q9ULI1 1742 aa23.95■■□□□ 1.43
SDCBP2-201ENST00000339987 COL5A2P05997 1499 aaPredicted RBP23.95■■□□□ 1.42
SDCBP2-201ENST00000339987 ANKRD24Q8TF21 1146 aa23.95■■□□□ 1.42
SDCBP2-201ENST00000339987 SLIT2O94813 1529 aa23.95■■□□□ 1.42
SDCBP2-201ENST00000339987 ERBB3P21860 1342 aa23.94■■□□□ 1.42
SDCBP2-201ENST00000339987 NUDCQ9Y266 331 aa23.94■■□□□ 1.42
SDCBP2-201ENST00000339987 FAM208AQ9UK61 1670 aaKnown RBP23.93■■□□□ 1.42
SDCBP2-201ENST00000339987 PNISRQ8TF01 805 aaKnown RBP23.93■■□□□ 1.42
SDCBP2-201ENST00000339987 BTG4Q9NY30 223 aa23.93■■□□□ 1.42
SDCBP2-201ENST00000339987 RGPD1P0DJD0 1748 aa23.92■■□□□ 1.42
SDCBP2-201ENST00000339987 NRAPQ86VF7 1730 aa23.92■■□□□ 1.42
SDCBP2-201ENST00000339987 MEX3CQ5U5Q3 659 aaKnown RBP23.92■■□□□ 1.42
SDCBP2-201ENST00000339987 LTV1Q96GA3 475 aaPredicted RBP23.92■■□□□ 1.42
SDCBP2-201ENST00000339987 C8orf37Q96NL8 207 aa23.92■■□□□ 1.42
SDCBP2-201ENST00000339987 FNBP4Q8N3X1 1017 aaPredicted RBP23.91■■□□□ 1.42
SDCBP2-201ENST00000339987 WDR17Q8IZU2 1322 aa23.9■■□□□ 1.42
SDCBP2-201ENST00000339987 NGLY1Q96IV0 654 aa23.9■■□□□ 1.42
SDCBP2-201ENST00000339987 WDR43Q15061 677 aaKnown RBP eCLIP23.89■■□□□ 1.41
SDCBP2-201ENST00000339987 IGSF1Q8N6C5 1336 aa23.88■■□□□ 1.41
SDCBP2-201ENST00000339987 NCAPD2Q15021 1401 aa23.87■■□□□ 1.41
SDCBP2-201ENST00000339987 U2SURPO15042 1029 aaKnown RBP23.87■■□□□ 1.41
SDCBP2-201ENST00000339987 EVA1CP58658 441 aa23.87■■□□□ 1.41
SDCBP2-201ENST00000339987 EYA1Q99502 592 aa23.87■■□□□ 1.41
SDCBP2-201ENST00000339987 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.87■■□□□ 1.41
SDCBP2-201ENST00000339987 CSB-PGBD3P0DP91 1061 aa23.86■■□□□ 1.41
SDCBP2-201ENST00000339987 BCL9LQ86UU0 1499 aa23.86■■□□□ 1.41
SDCBP2-201ENST00000339987 STRN4Q9NRL3 753 aa23.85■■□□□ 1.41
SDCBP2-201ENST00000339987 RGPD2P0DJD1 1756 aa23.85■■□□□ 1.41
SDCBP2-201ENST00000339987 U2AF1L5P0DN76 240 aaPredicted RBP23.84■■□□□ 1.41
SDCBP2-201ENST00000339987 U2AF1Q01081 240 aaKnown RBP eCLIP23.84■■□□□ 1.41
SDCBP2-201ENST00000339987 NBPF6Q5VWK0 638 aa23.84■■□□□ 1.41
SDCBP2-201ENST00000339987 UNC5CLQ8IV45 518 aa23.84■■□□□ 1.41
SDCBP2-201ENST00000339987 NBPF4Q96M43 638 aa23.84■■□□□ 1.41
SDCBP2-201ENST00000339987 CRB1P82279 1406 aa23.84■■□□□ 1.41
SDCBP2-201ENST00000339987 KDRP35968 1356 aa23.84■■□□□ 1.41
SDCBP2-201ENST00000339987 NLRP2Q9NX02 1062 aa23.84■■□□□ 1.41
SDCBP2-201ENST00000339987 LARP1Q6PKG0 1096 aaKnown RBP23.83■■□□□ 1.4
SDCBP2-201ENST00000339987 CARD10Q9BWT7 1032 aa23.83■■□□□ 1.4
SDCBP2-201ENST00000339987 ADAMTS8Q9UP79 889 aa23.83■■□□□ 1.4
SDCBP2-201ENST00000339987 AFF2P51816 1311 aa23.82■■□□□ 1.4
SDCBP2-201ENST00000339987 TOM1L2Q6ZVM7 507 aa23.82■■□□□ 1.4
SDCBP2-201ENST00000339987 USP21Q9UK80 565 aa23.82■■□□□ 1.4
SDCBP2-201ENST00000339987 FCHSD2O94868 740 aa23.81■■□□□ 1.4
SDCBP2-201ENST00000339987 FAM9BQ8IZU0 186 aa23.81■■□□□ 1.4
SDCBP2-201ENST00000339987 SULT6B1Q6IMI4 303 aa23.8■■□□□ 1.4
SDCBP2-201ENST00000339987 VPS72Q15906 364 aa23.79■■□□□ 1.4
SDCBP2-201ENST00000339987 RSPH6AQ9H0K4 717 aa23.79■■□□□ 1.4
SDCBP2-201ENST00000339987 HMOX1P09601 288 aa23.78■■□□□ 1.4
SDCBP2-201ENST00000339987 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
SDCBP2-201ENST00000339987 USHBP1Q8N6Y0 703 aa23.78■■□□□ 1.4
SDCBP2-201ENST00000339987 PNNQ9H307 717 aaKnown RBP23.77■■□□□ 1.4
SDCBP2-201ENST00000339987 SPATA31A5Q5VU36 1347 aa23.76■■□□□ 1.39
SDCBP2-201ENST00000339987 SPATA31A7Q8IWB4 1347 aa23.76■■□□□ 1.39
SDCBP2-201ENST00000339987 SPATA31A1Q5TZJ5 1347 aa23.75■■□□□ 1.39
SDCBP2-201ENST00000339987 PLEKHG2Q9H7P9 1386 aa23.75■■□□□ 1.39
SDCBP2-201ENST00000339987 ATRNO75882 1429 aa23.75■■□□□ 1.39
SDCBP2-201ENST00000339987 PRKAR2BP31323 418 aa23.74■■□□□ 1.39
SDCBP2-201ENST00000339987 PLEKHF1Q96S99 279 aa23.74■■□□□ 1.39
SDCBP2-201ENST00000339987 THRAP3Q9Y2W1 955 aaKnown RBP23.74■■□□□ 1.39
SDCBP2-201ENST00000339987 TRPC5Q9UL62 973 aaPredicted RBP23.73■■□□□ 1.39
SDCBP2-201ENST00000339987 ZNF772Q68DY9 489 aaPredicted RBP23.72■■□□□ 1.39
SDCBP2-201ENST00000339987 TCP11L2Q8N4U5 519 aa23.72■■□□□ 1.39
SDCBP2-201ENST00000339987 RUNDC1Q96C34 613 aa23.72■■□□□ 1.39
SDCBP2-201ENST00000339987 RAPGEF4Q8WZA2 1011 aa23.71■■□□□ 1.39
SDCBP2-201ENST00000339987 CCDC9Q9Y3X0 531 aaKnown RBP23.71■■□□□ 1.39
SDCBP2-201ENST00000339987 WNK3Q9BYP7 1800 aa23.71■■□□□ 1.39
SDCBP2-201ENST00000339987 DISP2A7MBM2 1401 aa23.7■■□□□ 1.39
SDCBP2-201ENST00000339987 PARP4Q9UKK3 1724 aaKnown RBP23.7■■□□□ 1.38
SDCBP2-201ENST00000339987 MEGF6O75095 1541 aa23.7■■□□□ 1.38
SDCBP2-201ENST00000339987 NEFMP07197 916 aa23.69■■□□□ 1.38
SDCBP2-201ENST00000339987 TATP17735 454 aaPredicted RBP23.69■■□□□ 1.38
SDCBP2-201ENST00000339987 BARGINQ6ZT62 677 aa23.69■■□□□ 1.38
SDCBP2-201ENST00000339987 CCDC146Q8IYE0 955 aa23.69■■□□□ 1.38
SDCBP2-201ENST00000339987 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
SDCBP2-201ENST00000339987 MAPK8IP3Q9UPT6 1336 aa23.69■■□□□ 1.38
SDCBP2-201ENST00000339987 IL2RBP14784 551 aa23.68■■□□□ 1.38
SDCBP2-201ENST00000339987 CDCA7Q9BWT1 371 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms